TCONS_00063260-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063260-protein
Unique NameTCONS_00063260-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length327

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063260-protein ID=TCONS_00063260-protein|Name=TCONS_00063260-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
MMVKLQRNLSQGSFYTTILLMLIISTQTMNAEKPSAEVIEEIKKIILLKI
GVDKPPPPDTSERPNFQEQVKAQSIRTWRRNTRFQAEHEDRALSKIQAKP
INKAGFRVFSFKSEQFFQKGYAIKSAKLTFIPGKDLTSKTGPQSQIEIQR
RKIVRYTIDALSKLTVVVDIKGDIDLWKKKHGSKADYRLKFKCSSKVCID
STTIPFIDLEYRKISTKVKKSSNPGQICSPGGCCRKTVTVSIKDLGWSDW
FFMPESFDYHYCVGTCSNMQNSLYFRLLKSLNSSTCCAPTELTGMRALYR
INKLVHDRYIKNLTPKACACGGIAGVR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039643XLOC_039643Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063260TCONS_00063260Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001839TGF-b_C
IPR029034Cystine-knot_cytokine
Vocabulary: Molecular Function
TermDefinition
GO:0008083growth factor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008083 growth factor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00669INHIBINAcoord: 233..250
score: 38.89
coord: 250..267
score: 49.31
IPR001839Transforming growth factor-beta, C-terminalSMARTSM00204TGFB_2coord: 233..321
e-value: 2.5E-10
score: 50.3
IPR001839Transforming growth factor-beta, C-terminalPFAMPF00019TGF_betacoord: 232..320
e-value: 1.2E-15
score: 58.2
IPR001839Transforming growth factor-beta, C-terminalPROSITEPS51362TGF_BETA_2coord: 217..321
score: 19.193
IPR029034Cystine-knot cytokineGENE3D2.10.90.10coord: 222..321
e-value: 2.6E-17
score: 62.9
IPR029034Cystine-knot cytokineSUPERFAMILY57501Cystine-knot cytokinescoord: 231..320

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063260-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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