HlhIE-2 Helix-loo-helix transcription factor (polypeptide) - C. hemisphaerica

Overview
NameHlhIE-2 Helix-loo-helix transcription factor
Unique NameTCONS_00063261-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length247

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063261-protein ID=TCONS_00063261-protein|Name=HlhIE-2 Helix-loo-helix transcription factor|organism=Clytia hemisphaerica|type=polypeptide|length=247bp
MVKHLDENQTAVKTKTKTKRKTCRRTKKNINSKDKAKKMFPPIEQDHQQI
LFGDQYVPDMRYLPNIKLEPYFETAYYPTSSHSIDLNTTKFNPIDKNSFH
TPCFDGYHTTTTNTNLLNLGREPSPTHLGPDTDQSLTPNLPCDTVVKPQK
IAKKTRTRKSRNSSTCGKVRSRLSSDSGLPREKDRARVFNEAFEGLRKRI
PSIPATKKLSKIEILRLAICYMSYLKFVTTDDPFLVSVDKESADQLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039644XLOC_039644Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063261TCONS_00063261Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 179..231
e-value: 1.2E-10
score: 51.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 146..227
e-value: 8.4E-12
score: 44.3
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 181..225
e-value: 5.6E-11
score: 42.1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 173..225
score: 13.027
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 181..226
e-value: 8.95955E-12
score: 57.2239
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 181..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..182

Blast
The following BLAST results are available for this feature:
BLAST of HlhIE-2 Helix-loo-helix transcription factor vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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