TCONS_00063280-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063280-protein
Unique NameTCONS_00063280-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length307

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063280-protein ID=TCONS_00063280-protein|Name=TCONS_00063280-protein|organism=Clytia hemisphaerica|type=polypeptide|length=307bp
MDPFETSSFSSLIEREEREEVIQLDLHTAALIGDYDMVRDCIHKKSDLDH
TNRGGWTPLMYAAYVGRDNILNMLLDAGARIDIQSKSVKLGSTALMLASY
CATESIMYFLLQHGASINLRDGEGMTSLFHAVRQGHQSAVKLLASKGADL
DLGQYLTGITPIMEAAISGHELIFNILLDHGADITRRTKKGETVKSLAMR
HKNTSIVALIDKHISPQEPTRKEPTLELHDQFGASISSSGVIEGSIQDGP
AIIDSLMRNAANSARNPDFSEGAPVASLCPEIQNKLSIQGQGGPPPQINN
PVFQNGI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039657XLOC_039657Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063280TCONS_00063280Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 90..119
e-value: 0.027
score: 23.6
coord: 21..50
e-value: 1300.0
score: 4.2
coord: 123..152
e-value: 0.0054
score: 26.0
coord: 54..83
e-value: 5.0E-5
score: 32.7
coord: 157..186
e-value: 0.0017
score: 27.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 54..86
score: 12.155
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 157..189
score: 11.407
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 90..122
score: 10.633
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 123..155
score: 10.766
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 6..115
e-value: 3.7E-26
score: 91.0
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 116..286
e-value: 5.6E-27
score: 94.2
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 123..187
e-value: 4.4E-10
score: 39.9
coord: 26..121
e-value: 1.0E-12
score: 48.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 26..210
score: 45.784
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 25..212
NoneNo IPR availableCDDcd00204ANKcoord: 49..178
e-value: 6.2813E-31
score: 112.862

Blast
[Close]
BLAST of TCONS_00063280-protein vs. Swiss-Prot (Human)
Match: ANKS3 (Ankyrin repeat and SAM domain-containing protein 3 OS=Homo sapiens GN=ANKS3 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.360e-55
Identity = 90/199 (45.23%), Postives = 131/199 (65.83%), Query Frame = 0 
Query:   22 IQLDLHTAALIGDYDMVRDCIHKKS-DLDHTNRGGWTPLMYAAYVGRDNILNMLLDAGARIDIQSKSVKLGSTALMLASYCATESIMYFLLQHGASINLRDGEGMTSLFHAVRQGHQSAVKLLASKGADLDLGQYLTGITPIMEAAISGHELIFNILLDHGADITRRTKKGETVKSLAMRHKNTSIVALIDKHISPQEP 219
            + LDLHTAA IG Y++V++C+ ++  DL+  N GGWTPLMYA+Y+G D I+++LL+AG  +++ +     G T LMLAS C  ESI YFLLQ GA + ++D +G T+LFH    GHQ  V+ L   GA+ ++ + + G TP+MEAA +GHE+I    L+HG  +  R   G T + LA ++ +  IVAL+D + SP  P
Sbjct:   35 VPLDLHTAASIGQYEVVKECVQRRELDLNKKNGGGWTPLMYASYIGHDTIVHLLLEAGVSVNVPTPE---GQTPLMLASSCGNESIAYFLLQQGAELEMKDIQGWTALFHCTSAGHQHMVRFLLDSGANANVREPICGFTPLMEAAAAGHEIIVQYFLNHGVKVDARDHSGATARMLAKQYGHMKIVALMDTY-SPSLP 229
The following BLAST results are available for this feature:
BLAST of TCONS_00063280-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANKS31.360e-5545.23Ankyrin repeat and SAM domain-containing protein 3... [more]
back to top