TCONS_00063428-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063428-protein
Unique NameTCONS_00063428-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length897

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063428-protein ID=TCONS_00063428-protein|Name=TCONS_00063428-protein|organism=Clytia hemisphaerica|type=polypeptide|length=897bp
MDIIEAAPEPTPTPTANNDKVKLCGKKRNCSKPSGHASRCDSNRKITSLS
FTTRNLQAAYRNVKEKIISLTSTAGQKEAKLKNLDVEICKKEQEILNKSQ
QKEELEENVNALGKESDKLRTLFEQTEQGRKRIEGVPTTNKMINDNFSST
RYRRRKKTKAMLEYYHGGAEGANYGAWDFLQSNASSNMMEKLFLNHKRGK
FLQTLYGKFKVNDKGALDRAIALKYSTFQSRRKYTFQCKIQKSMYDPSSE
TFGKISMTYGEYNLDLNTKSISHQSVDKFVKGLNIGELHQIEGYSGVTRT
LTALTTMIVDLNLKVNSRRENLKWFKDNVNHFIVEFSDDGAPESSERTMT
IGTLSLWNFGNRIRSRDYHYLLHMLSASEKDRVCEYLWQQHCEEMKLIEG
NILMINDTQCTFEFVPSADTSWICFAANVLGCSATYPSPFANVHKGSLTE
MGGSIGTKKEDRWQIPTTKSRDAELTTLNEFRLKNNHPNPEVAHQKELDF
MAENGLRQIGPPRIGDFADRIAPEPMHLEINCWKHVLDVIYKEAVRRDKF
EDFIDALKSPQKIVNGTEQKTGCGLAYIAKEIVKHHDAEENKLKRLEVRL
IGSQAISLAQYSFRLVDSLCSPDETPTQQIKRLALAKICETLRDIGSLIN
RIDVGFNNYPEVIRDLCTIFFNMFSLFFEQHCQLTVWTMGYVIPYHVQNV
FEKYGVGYGIMSMQGKEAKHAALKQELRNNTNRSIAQDATGKWHQIARSN
YIRKFYLPYHFPVSSNSYHSHFRPRKAFPTDGEIECACSRTIDEDLTSCK
VCIESIELMECAKLAKLTESVTKKLKPIECVTCGLRFADKLTLKNHVGTN
HILKDVLNPKKMNVEELKNALKSRNMNTTGKKTELVKRLEGRLTTEV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039754XLOC_039754Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063428TCONS_00063428Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 579..599
NoneNo IPR availableCOILSCoilCoilcoord: 95..122
NoneNo IPR availableCOILSCoilCoilcoord: 713..733
NoneNo IPR availableGENE3D1.20.5.170coord: 42..139
e-value: 0.0047
score: 16.5
IPR003034SAP domainSMARTSM00513sap_9coord: 859..893
e-value: 1.8E-5
score: 34.2
IPR003034SAP domainGENE3D1.10.720.30coord: 842..891
e-value: 1.2E-9
score: 37.3
IPR003034SAP domainPFAMPF02037SAPcoord: 860..890
e-value: 4.7E-10
score: 38.9
IPR003034SAP domainPROSITEPS50800SAPcoord: 859..893
score: 10.006
IPR003034SAP domainSUPERFAMILY68906SAP domaincoord: 857..893
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 830..851

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063428-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top