TCONS_00063478-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063478-protein
Unique NameTCONS_00063478-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length245

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063478-protein ID=TCONS_00063478-protein|Name=TCONS_00063478-protein|organism=Clytia hemisphaerica|type=polypeptide|length=245bp
MMTGPPLSLQIDESAEPTAHHTPIPVSFHWQEKVKADLDRDVQLGVLEKV
PIGEPVTWCHRMVVCAKKNGEPRRTVDFQALNACATRETHHTQSPFHQVR
SVPHNVKKTVTDAWNGYHSVPLCEEDKHLTTFITPWGRYRYCTAPQGYIS
SGDGYTRRFDEIASDFPNKIKVVDDSLLWADTLEGSFHQTAQWLDLCARN
GIILNPDKFTFGADTVEFAGFEITPTSVRPNEKIIKAIMDFPTPK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039785XLOC_039785Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063478TCONS_00063478Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 88..223
e-value: 8.3E-7
score: 28.6
NoneNo IPR availableGENE3D3.30.70.270coord: 177..245
e-value: 1.9E-11
score: 43.6
NoneNo IPR availableGENE3D3.10.10.10coord: 8..158
e-value: 9.0E-21
score: 73.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableCDDcd01647RT_LTRcoord: 54..223
e-value: 3.22471E-30
score: 110.763
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 10..243

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063478-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top