TCONS_00063511-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063511-protein
Unique NameTCONS_00063511-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length294

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063511-protein ID=TCONS_00063511-protein|Name=TCONS_00063511-protein|organism=Clytia hemisphaerica|type=polypeptide|length=294bp
MSCICNNNSTNEIPCINNKCVLSSSTDQRCFTSLEKAHKGCVDKRRCYSH
KNPFKRPLLECCDVQTNGNLCNENQQLRYLLIDANGPVMKMTPGNTDQSP
TSQIPIQEAAPFRLSNVQIAAVISVPFSLLFIGLSLLVLIRGKRNKRKAK
KVEEEYNRREEVLLGLESLNLQEITTSGSGAGLPLLIQRTIARQIILHEV
IGTGRFGYVHRGTWHDQNVAVKLFLTNEENSWFREAQVYQTTMLRHENIL
GFIAADNKDTGACTELWLVTEYHXSVRTWTFSLESVAFIFVNFL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039813XLOC_039813Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063511TCONS_00063511Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003605GS_dom
IPR001245Ser-Thr/Tyr_kinase_cat_dom
IPR017441Protein_kinase_ATP_BS
IPR000719Prot_kinase_dom
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004675transmembrane receptor protein serine/threonine kinase activity
GO:0004672protein kinase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0016020 membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0004675 transmembrane receptor protein serine/threonine kinase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003605GS domainSMARTSM00467GS_4coord: 166..195
e-value: 2.0E-8
score: 44.0
IPR003605GS domainPFAMPF08515TGF_beta_GScoord: 173..193
e-value: 3.0E-10
score: 39.3
IPR003605GS domainPROSITEPS51256GScoord: 157..194
score: 13.505
IPR001245Serine-threonine/tyrosine-protein kinase, catalytic domainPFAMPF07714Pkinase_Tyrcoord: 197..273
e-value: 1.4E-6
score: 27.7
NoneNo IPR availableGENE3D3.30.200.20coord: 186..272
e-value: 1.2E-12
score: 47.4
IPR017441Protein kinase, ATP binding sitePROSITEPS00107PROTEIN_KINASE_ATPcoord: 201..222
IPR000719Protein kinase domainPROSITEPS50011PROTEIN_KINASE_DOMcoord: 195..294
score: 10.987
IPR011009Protein kinase-like domainSUPERFAMILY56112Protein kinase-like (PK-like)coord: 182..274

Blast
[Close]
BLAST of TCONS_00063511-protein vs. Swiss-Prot (Human)
Match: TGFR1 (TGF-beta receptor type-1 OS=Homo sapiens GN=TGFBR1 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 7.767e-50
Identity = 106/277 (38.27%), Postives = 144/277 (51.99%), Query Frame = 0 
Query:    3 CICNNNSTNEIPCINNKCVLSSSTDQRCFTSLEKAHKGCVDKRRCYSHKN--PFKRPLLECCDVQTNGNLCNENQQLRYLLIDANGPVMKMTPGNTDQSPTSQIPIQEAAPFRLSNVQIAAVISVPFSLLFIGLSLLVLIRGKRNKRKAKKVEEEYNRREEVLLG----LESLNLQEITTSGSGAGLPLLIQRTIARQIILHEVIGTGRFGYVHRGTWHDQNVAVKLFLTNEENSWFREAQVYQTTMLRHENILGFIAADNKDTGACTELWLVTEYH 273
            C C+  + +   C+         TD  CF S+ +     +    C +  +  P  RP +           C  + +         G V      N D     ++P    +   L  V++AAVI+ P   + I L L+V I   R     +   EE    +   +     L+ L + ++TTSGSG+GLPLL+QRTIAR I+L E IG GRFG V RG W  + VAVK+F + EE SWFREA++YQT MLRHENILGFIAADNKD G  T+LWLV++YH
Sbjct:   36 CFCHLCTKDNFTCV---------TDGLCFVSVTETTDKVIHNSMCIAEIDLIPRDRPFV-----------CAPSSK--------TGSVTTTYCCNQDHCNKIELPTTVKSSPGLGPVELAAVIAGPVCFVCISLMLMVYICHNRTVIHHRVPNEEDPSLDRPFISEGTTLKDL-IYDMTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 283
The following BLAST results are available for this feature:
BLAST of TCONS_00063511-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TGFR17.767e-5038.27TGF-beta receptor type-1 OS=Homo sapiens GN=TGFBR1... [more]
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