TCONS_00063718-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063718-protein
Unique NameTCONS_00063718-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length738

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063718-protein ID=TCONS_00063718-protein|Name=TCONS_00063718-protein|organism=Clytia hemisphaerica|type=polypeptide|length=738bp
MEWFRIYLVIFGVLCVCSNRVRSAEAKPVTKVKAFRIGVNRFWLHCFPRG
KQAINGRKFEWFYNGTALKPNKRIKIRGSNTWVRIQKPTAQDVGKYSCKE
ILAGNDRKTLSIFHVKIDQSTLEFINKNRPKNKIVLSGDTTTLYCNATGT
QPIKYKWYKNNKKIRRTSRPYLILKNLKTTDSAKYSCKAKNKVLNIRYDV
NLDVKARARVSPYIEKDGDDDDGKAIVGSTASLSCYELQSPTLPKFVWLK
WKGAANLTVLNRIAESSNNLVDYASMVEILPADRYKQVSKKAFRLRDPEH
RIHGVDLIFPDVTLFDRGFYTCLVSNQAGYDYKITYFNIERSRKPRIPNN
ITDLAEKIGDDVEIKCFILGEGPLNVTWYKDDVPIGELQHISKFQQRNHR
SIFKVSNFKSADAGYYKCRAKNAFGEASYTFKLVPMVTNNNAVPKIIKDS
KTTYQVGIGEDLEIKIQYVVKGIAHTQLLLYCGGQTDNPLCAGGRKTLSG
TFRVLDVPRTMVSEGDNHTVMLSFKKINESLYGNYSVFVGNALGYDFINV
TIKPAAVKPVILHMRTTTFITQLGVDFMFPECKVVIQSKSLAKITWKKSF
SDIASSERHIVRQNKLMIKDVRNSDAGYYTCNARNSAGEDQVRLILKVWP
LVINKTSPALITRLGRGTVEIFCSAYGNTRNMTGTIENAGYPVPNVVKTT
KDNLFMVKVNVTDDGTFVCTIQSGKEKAQSATVVEQFH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039941XLOC_039941Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063718TCONS_00063718Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003599Ig_sub
IPR003598Ig_sub2
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 451..553
e-value: 160.0
score: 0.9
coord: 220..340
e-value: 0.47
score: 19.5
coord: 130..205
e-value: 5.7E-8
score: 42.5
coord: 351..436
e-value: 9.9E-4
score: 28.4
coord: 566..649
e-value: 3.4
score: 15.6
coord: 658..736
e-value: 1.7
score: 17.6
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 572..638
e-value: 0.096
score: 16.9
coord: 357..425
e-value: 1.1E-10
score: 51.5
coord: 226..329
e-value: 0.26
score: 12.7
coord: 136..194
e-value: 1.2E-9
score: 48.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 439..558
e-value: 0.11
score: 12.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 179..211
e-value: 9.2E-4
score: 18.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 125..178
e-value: 4.8E-12
score: 45.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 655..736
e-value: 0.016
score: 14.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 24..123
e-value: 9.2E-7
score: 28.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 344..438
e-value: 2.6E-15
score: 55.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 220..343
e-value: 3.1E-8
score: 33.2
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 574..654
e-value: 1.6E-11
score: 43.6
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 586..648
e-value: 1.5E-10
score: 40.9
coord: 345..433
e-value: 7.4E-15
score: 54.7
NoneNo IPR availablePFAMPF13927Ig_3coord: 129..191
e-value: 5.0E-11
score: 43.0
NoneNo IPR availableCDDcd00096Igcoord: 362..432
e-value: 2.42382E-10
score: 56.7287
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 345..430
score: 10.898
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 138..211
score: 10.626
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 28..111
score: 7.54
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 559..645
score: 9.01
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 212..335
score: 7.54
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 224..350
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 582..649
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 318..434
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 129..207
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 42..99

Blast
BLAST of TCONS_00063718-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 2.064e-22
Identity = 153/655 (23.36%), Postives = 239/655 (36.49%), Query Frame = 0
Query:   61 WFYNGTALKPNKRIKIRGSNTWVRIQKPTAQDVGKYSCKEILAGNDRKTLSIFHVKIDQSTLEFINKN-------RPKNKIVLSGDTTTLYCNATGTQPIKYKWYKNNKKIRRTSR-------PYLILKNLKTTDSAKYSCKAKNKVLNIRYDVNLDVKARARVSPYIEK---------DGDDDDGK-AIVGSTASLSCYELQSPTLPKFVWLKWKGAANLTVLNRIAESSNNLVDYASMVEILPADRYKQVSKKAFRLRDPEHRIHGVDLIFPDVTLFDRGFYTCLVSNQAG-----YDYKITYFNIERSRKPRIPNNITDLAEKIGDDVEIKCFILGEGPLNVTWYKDDVPIGELQHISKFQQRNHRSIFKVSNFKSADAGYYKCRAKNAFGEASYTFKLVPMVTNNNAVPKIIKDSKTTYQVGIGEDLEIKIQYVVKGIAHTQLLLYCGGQTDNPLCAGGRKTLSGTFRVLDVPRTMVSEGDNHTVML------SFKKINESLYGNYSVFVGNALGYDFINVTIKPAAVKPVILHMRTTTFITQLGVDFMFPECKVVIQSKSLAKITWKKSFSDIASSER-HIVRQNKLM-IKDVRNSDAGYYTCNARNSAGEDQVRLILKVW-PLVINKTSPALITRLGRGTVEIFCSAYG 677
            WF +GT L+ N+ I+I      ++I      + G+YSC   +A N+   + I H ++       INK         PK   +   +T TL C A         WYK+ + ++             L +K  + +D+ +Y+C A     NI  +  LD     +V P  +K          G + + K  I+ +  SL C    +P  P   W  +K    LT  +++               ILP  R  Q+                     P   + D G YTC+  N+AG     YD ++    I +     +P  +T L  K      I+C   G      +W KD  P+ E  H  KF       I ++ N +  D G Y C A+N  G A   F L     N +  P +I        V +   + +  +  V G     L      + + P+       +    R L + R  VS+G  +T +       S KK + ++Y   S+   ++     +NV              R  T ++         EC+    +     ITW K+   I  S    I+   +++ IK    SD G Y C A N AG D     L V+ P  I      +I       V + C A G
Sbjct: 2609 WFKDGTPLESNRNIRILPGGRTLQILNAQEDNAGRYSC---VATNEAGEM-IKHYEVKVYIPPIINKGDLWGPGLSPKEVKIKVNNTLTLECEAYAIPSASLSWYKDGQPLKSDDHVNIAANGHTLQIKEAQISDTGRYTCVAS----NIAGEDELDFDVNIQVPPSFQKLWEIGNMLDTGRNGEAKDVIINNPISLYCETNAAPP-PTLTW--YKDGHPLTSSDKVL--------------ILPGGRVLQI---------------------PRAKVEDAGRYTCVAVNEAGEDSLQYDVRVLVPPIIKGANSDLPEEVTVLVNK---SALIECLSSGSPAPRNSWQKDGQPLLEDDH-HKFLSNGR--ILQILNTQITDIGRYVCVAENTAGSAKKYFNL-----NVHVPPSVIGPKSENLTVVVNNFISLTCE--VSGFPPPDLSWL---KNEQPIKLNTNTLIVPGGRTLQIIRAKVSDGGEYTCIAINQAGESKKKFSLTVYVPPSIKDHDSESLSVVNV--------------REGTSVSL--------ECES--NAVPPPVITWYKNGRMITESTHVEILADGQMLHIKKAEVSDTGQYVCRAINVAGRDDKNFHLNVYVPPSIEGPEREVIVETISNPVTLTCDATG 3177          

HSP 2 Score: 100.908 bits (250), Expect = 1.312e-21
Identity = 140/653 (21.44%), Postives = 241/653 (36.91%), Query Frame = 0
Query:   44 LHCFPRGKQAINGRKFEWFYNGTALKP-NKRIKIRGSNTWVRIQKPTAQDVGKYSCKEILAGNDRKTLSIFHVKIDQSTLEFINKNRPKNKIVLSGDTTTLYCNATGTQPIKYKWYKNNKKIRR-------TSRPYLILKNLKTTDSAKYSCKAKNKVLNIRYDVNLDVKARARVSPYIEKDGDDDDGKAIVGSTASLSCYELQSPTLPKFVWLKWKGAANLTVLNRIAESSNNLVDYASMVEILPADRYKQVSKKAFRLRDPEHRIHGVDLIFPDVTLFDRGFYTCLVSNQAGYDYKITYFNIERSRKPRIPNNITDLAEKI---GDDVEIKCFILGEGPLNVTWYKDDVPIGELQHISKFQQRNHRSIFKVSNFKSADAGYYKCRAKNAFGEASYTFKLVPMVTNNNAVPKIIKDSKTTYQVGIGEDLEIKIQYVVKGIAHTQLLLYCGGQTDNPLCAGGRKTLSGTFRVLDVPRTMVSEGDNHTVMLSFKKINESLYGNYSVFVGNALGYD--FINVTIKPAAVKPVILHMRTTTFITQLGVDFMFPECKVVIQSKSLAKITWKKSFSDIASSE-RHIVRQNK-LMIKDVRNSDAGYYTCNARNSAGEDQVRLILKVW--PLVINKTS---PALITRLGRGTVEIFCSAY 676
            L C  RG   I      W  +G+ +   +  +++      + +      D G+Y+C  + A  +++      V +  + +        +N  VL      L C +    P    W K+   + +        +R  L +++ +  D+ +Y+C+A N       + N+++     V P I    +      I G+  SL C     P  P  +W K KG+  LT             D    V IL   R  Q+S                          D   Y+C+ SN AG   K   +N++   +P I N+ +   E I   G  + ++C + G  P  VTW KD  P+ + + +    + +   I ++ N   +D G Y C A N  G     + L     + +A P II + ++   + + E   + +     GI    +  +  G    P+      +LS + R+L   R           ML   +      G Y+  V NA G +     +++    V P I+   T   +       +   C+V      + +ITW K    +   E  HI+   + L I +V+    G YTC A + AG       L V+  P +    S   P  +T +      + C AY
Sbjct: 2031 LECEARG---IPAPSLTWLKDGSPVSSFSNGLQVLSGGRILALTSAQISDTGRYTCVAVNAAGEKQRDIDLRVYVPPNIM-----GEEQNVSVLISQAVELLCQSDAIPPPTLTWLKDGHPLLKKPGLSISENRSVLKIEDAQVQDTGRYTCEATNVAGKTEKNYNVNI----WVPPNIGGSDELTQLTVIEGNLISLLCESSGIPP-PNLIWKK-KGSPVLT-------------DSMGRVRILSGGRQLQISIAEKS---------------------DAALYSCVASNVAGTAKK--EYNLQVYIRPTITNSGSHPTEIIVTRGKSISLECEVQGIPPPTVTWMKDGHPLIKAKGVEILDEGH---ILQLKNIHVSDTGRYVCVAVNVAGMTDKKYDL-----SVHAPPSIIGNHRSPENISVVEKNSVSLTCEASGIPLPSITWFKDGW---PV------SLSNSVRILSGGR-----------MLRLMQTTMEDAGQYTCVVRNAAGEERKIFGLSV---LVPPHIVGENTLEDVKVKEKQSVTLTCEVT--GNPVPEITWHKDGQPLQEDEAHHIISGGRFLQITNVQVPHTGRYTCLASSPAGHKSRSFSLNVFVSPTIAGVGSDGNPEDVTVILNSPTSLVCEAY 2600          

HSP 3 Score: 82.8037 bits (203), Expect = 4.948e-16
Identity = 158/730 (21.64%), Postives = 278/730 (38.08%), Query Frame = 0
Query:   78 GSNTWVRIQKPTAQDVGKYSCKEI-LAGNDRK--TLSIF---HVKIDQSTLEFINKNRPKNKIVLSGDTTTLYCNATGTQPIKYKWYKNNKKI-----RRTSRPYLILK--NLKTTDSAKYSCKAKN-----------------------KVLNIRYDVNLDVKARARVSPY----------------------------IEKDGDDDDG------KAIVGSTASLSCYELQSPTLPKFVWLKWKGAANLTVLNRIAESSNNLVDYASMVEILPADRYKQV-SKKAFRLRDPEHRI--HGVDLIFPDVTLFDRGFYTCLVSNQAGYDYKITYFNIERSRKPRIPN--NITDLAEKIGDDVEIKCFILGEGPLNVTWYKDDVPIGELQHISKFQQRNHRSIFKVSNFKSADAGYYKCRAKNAFGEASYTFKLVPMVTNNNAVPKIIKDSKTTYQVGIGEDLEIKIQYVVKGIAHTQLLLYCGGQTDNPLCAGGRKTLSGTFRVLDVPRTMVSEGDNHTVMLSFKKINESLYGNYSVFVGNALGYDFINVTIKPAAVKPVILHMRTTTFITQLGVDFMFPECKVVIQSKSLAKITWKKSFSDIASSER--HIVRQNKLMIKDVRNSDAGYYTCNARNSAGEDQVRLILKVW-PLVI--NKTSPALITRLGRGTVEIFCSAYGNTRNMTGTIENAGYPV---PNV-VKTTKDNLFMVKVNVTDDGTFVCTIQS 723
            G++  + +  P  ++ G+Y C     AG  ++   L+++    V  DQ  L   ++++P    VL+G+  TL C      P    W K  + I     R T  P   +K    +T+DS  Y C A N                       K L ++    +D+   A+ +P                             I++    D G        I G+  +     +Q P   + +   +    N T   R+A   N  +++    +  P    K + + +    R+P   I   G  L+   VT +D G Y C+  N+AG   +   +N++    P I +   +T+++  +     + C + G     + WYKD+V + E    S  Q  N+  I K+      DAG Y C+A N  G +   F +      +  VP  I  +    +V +  + ++ ++  VKG     +  +  G+   PL  G            D    ++  G     +L  K    +  G Y   V NA G    ++ +    + P I     TT I+ L    +  EC+   +   +  ITW K    I SS +  +I +   L I   + SD+  YTC+  N AG  +    + V+ P +I  N  +P     +   ++ + C A GN   +   +++ G PV    N+ ++     L ++     D G ++C   S
Sbjct: 1031 GADGSLYVVSPGGEESGEYVCTATNTAGYAKRKVQLTVYVRPRVFGDQRGL---SQDKPVEISVLAGEEVTLPCEVKSLPPPIITWAKETQLISPFSPRHTFLPSGSMKITETRTSDSGMYLCVATNIAGNVTQAVKLNVHVPPKIQRGPKHLKVQVGQRVDIPCNAQGTPLPVITWSKGGSTMLVDGEHHVSNPDGTLSIDQATPSDAGIYTCVATNIAGTDETEITLHVQEPPTVEDLEPPY----NTTFQERVA---NQRIEFPCPAKGTPKPTIKWLHNGRELTGREPGISILEDGTLLVIASVTPYDNGEYICVAVNEAGTTER--KYNLKVHVPPVIKDKEQVTNVSVLLNQLTNLFCEVEGTPSPIIMWYKDNVQVTES---STIQTVNNGKILKLFRATPEDAGRYSCKAINIAGTSQKYFNI------DVLVPPTIIGTNFPNEVSVVLNRDVALECQVKGTPFPDIHWFKDGK---PLFLG------------DPNVELLDRGQ----VLHLKNARRNDKGRYQCTVSNAAGKQAKDIKLT-IYIPPSIKGGNVTTDISVLINSLIKLECET--RGLPMPAITWYKDGQPIMSSSQALYIDKGQYLHIPRAQVSDSATYTCHVANVAGTAEKSFHVDVYVPPMIEGNLATPLNKQVVIAHSLTLECKAAGNPSPILTWLKD-GVPVKANDNIRIEAGGKKLEIMSAQEIDRGQYICVATS 1716          
The following BLAST results are available for this feature:
BLAST of TCONS_00063718-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMCN12.064e-2223.36Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2[more]
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