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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00063876-protein ID=TCONS_00063876-protein|Name=TCONS_00063876-protein|organism=Clytia hemisphaerica|type=polypeptide|length=282bp
MPPVRSFLRTGQVRFSSVSDLTSGHTQDAPMKPLLSHNHNAGVLPESNLS
NAKPTKTQQHGTSSNYMDLNEFFQKVEKSSDDMSSNPGDLDPDYPKPTVD
LLASLLTLGKMIQNQKQLIQRQTKPIVAPGITPTQELNDMMDIETEISSS
SRQDAFPNNSLDDLNNMYQEMDKEPSISSSNTSINSKRQVVPEDIKDMDY
WNRRKRNNLAAKKSREERRKKELEVVETTKHLEKENSQLTLILKRLTSRN
EWLESRLQDIRNRRRTDQSIESSSLSSSAEES Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR004827 | bZIP |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | transcription factor activity, sequence-specific DNA binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| molecular_function |
GO:0003700 |
transcription factor activity, sequence-specific DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 206..226 |
| None | No IPR available | COILS | Coil | Coil | coord: 243..263 |
| None | No IPR available | GENE3D | 1.20.5.170 | | coord: 184..262
e-value: 3.4E-8
score: 32.9 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 40..63 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 258..282 |
| None | No IPR available | CDD | cd14695 | bZIP_HLF | coord: 196..251
e-value: 7.86113E-15
score: 66.0365 |
| None | No IPR available | SUPERFAMILY | 57959 | Leucine zipper domain | coord: 196..257 |
| IPR004827 | Basic-leucine zipper domain | SMART | SM00338 | brlzneu | coord: 195..259
e-value: 0.0088
score: 21.0 |
| IPR004827 | Basic-leucine zipper domain | PFAM | PF07716 | bZIP_2 | coord: 197..244
e-value: 2.5E-10
score: 40.2 |
| IPR004827 | Basic-leucine zipper domain | PROSITE | PS50217 | BZIP | coord: 197..260
score: 9.668 |
Blast
The following BLAST results are available for this feature:
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