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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00063922-protein ID=TCONS_00063922-protein|Name=TCONS_00063922-protein|organism=Clytia hemisphaerica|type=polypeptide|length=116bp MGKGKKDSGPIPGDATKGAKVFKQRCSQCHTVENGGKHKTGPNLYGLIGR KTGQAANFSYTDANKKKGITWSKDTLWVYLENPAKYIPGTKMVFAGIKKK NERADLIAYLEETTTK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term | Definition |
GO:0009055 | electron carrier activity |
GO:0020037 | heme binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0009055 |
electron carrier activity |
molecular_function |
GO:0020037 |
heme binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR002327 | Cytochrome c, class IA/ IB | PRINTS | PR00604 | CYTCHRMECIAB | coord: 54..64 score: 59.13 coord: 68..84 score: 53.27 coord: 38..53 score: 72.31 coord: 25..32 score: 72.66 coord: 104..112 score: 70.92 coord: 87..97 score: 81.31 |
IPR009056 | Cytochrome c-like domain | PFAM | PF00034 | Cytochrom_C | coord: 15..112 e-value: 1.1E-12 score: 48.8 |
IPR009056 | Cytochrome c-like domain | GENE3D | 1.10.760.10 | | coord: 13..114 e-value: 6.8E-28 score: 97.4 |
IPR009056 | Cytochrome c-like domain | PROSITE | PS51007 | CYTC | coord: 13..114 score: 15.767 |
IPR009056 | Cytochrome c-like domain | SUPERFAMILY | 46626 | Cytochrome c | coord: 12..112 |
Blast
BLAST of TCONS_00063922-protein vs. Swiss-Prot (Human)
Match: CYC (Cytochrome c OS=Homo sapiens GN=CYCS PE=1 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 2.562e-52 Identity = 75/104 (72.12%), Postives = 84/104 (80.77%), Query Frame = 0 Query: 13 GDATKGAKVFKQRCSQCHTVENGGKHKTGPNLYGLIGRKTGQAANFSYTDANKKKGITWSKDTLWVYLENPAKYIPGTKMVFAGIKKKNERADLIAYLEETTTK 116
GD KG K+F +CSQCHTVE GGKHKTGPNL+GL GRKTGQA +SYT ANK KGI W +DTL YLENP KYIPGTKM+F GIKKK ERADLIAYL++ T +
Sbjct: 2 GDVEKGKKIFIMKCSQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGYSYTAANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKATNE 105
The following BLAST results are available for this feature:
BLAST of TCONS_00063922-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 ( Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match Name | E-value | Identity | Description | |
CYC | 2.562e-52 | 72.12 | Cytochrome c OS=Homo sapiens GN=CYCS PE=1 SV=2 | [more] |
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