Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00064021-protein ID=TCONS_00064021-protein|Name=TCONS_00064021-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1551bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00064021-protein vs. Swiss-Prot (Human)
Match: LAMB2 (Laminin subunit beta-2 OS=Homo sapiens GN=LAMB2 PE=1 SV=2) HSP 1 Score: 353.599 bits (906), Expect = 2.355e-99 Identity = 270/909 (29.70%), Postives = 399/909 (43.89%), Query Frame = 0 Query: 65 IVASNTCGTPTAEGFC---YIGPQKNCEICNAAVPQLA------HPAELMVDRFMLNNGVTWWQSMTWWTSNQLDLSKLFVPLKVNITLDLKKMYLISGGIYVTFKTERPKQMIIEKSRDFGKTWQVYQYFAKNCRSMYNLQPDPSINGNXQYFAKNCRSMYNLQPDPSIDGNSPFKDTCSELYSGEFPRSGGVVHFDPRLRYQPQDYYHADVHRYLEATNIRLRLEYPGTDGREYINEETTLNQ-YYYAISDLRVDARCDCNGHGEFCDIGSDGQE--------KCDCHHFTQGVDCGECKPLYRNRLWMAGNATNANPCQKCECFGHATACTY-------SAFLNQGMCSNCQDNTRGIRCDQCVERFYRNISVTLNDPKVCIPCDCYAPGIMDDGKC--LQSATMNQVLGQCTCKPGIYGRRCDECIPGKWGFANPPIGTCFDCSCNIFGTINRNQICDQNSGQCTCKVSTTGRVCDSCKDGYYKFPTSLSNECELCPCNEGGA-HPSCNKLTGICQCRIGVMGAQCDLIKPGYFFPNFTYLKFEPEFSNANGSFSWYYLVR-NYAKYFTGFGYAKLEAGQEISFDIM-VAVETKYFMLLRYSLYQLEWFSQILPQGREISDWSGGTDKDFYLKSSDQPMQWL-FSVTIYDSGGQLAHA---HTFTVQDLTIG----NAQFMLSKTSFELKANVKYT--LRIVYEDSSKSYGQPWP---LLLDSVSFMLDYTVSQYFQG-----LTISKKLEVFNCFSGSKDLSTTYNLPN-ACEVPTFTIDLQIYKKALTCNCFTAGSHLWNTCDQYGGQCQCREGYGDRACDQCLPGYYGDPGVGCLKCACSTVGSLSLACNRQSGQCTCKENAHGLKCDECLLGYYYLSETNPKGCLECFGYGHLSSCSSAVG 924 + AS+TCG + +C ++ +K C +C++ P A H + +V F WWQS +P V I LDL+ + + + +TFKT RP M++E+S DFG+TW VY+YF+ +C + + P + + C S Y+ + +PS +G ++ DP + D Y + + L+ TN+R+ L T G ++ + + YYYA+ +L V C C GH C C C H T+G++C +C+ YR+ W +++ C+KCEC GH +C + S ++ G+C CQ NT G C+ C FYR+ + L DP VC CDC G D G+C + V GQC CK + G RC +C G +G + C C CN GT+ + CD NSG C CK TGR CD C G++ L C C C+ GGA P C++ TG C CR ++G +C+ ++PGYF P +L +E E + LV +TG G+ +L+ GQ + F + V Y +LLR + PQ P QW + + G AH+ H D G +A++++ L+ + Y L++V S P+ LL+DS+ + V + F G L E + C + L + P+ AC ++ IY AL C C GS L + C+ +GGQC C+ G R CD C PGYYG GC C CS G+LS C + SGQC C+ A GL+CD C G + P C GH C++ G Sbjct: 62 LTASSTCGLNGPQPYCIVSHLQDEKKCFLCDSRRPFSARDNPHSHRIQNVVTSFAPQRRAAWWQSENG------------IP-AVTIQLDLEAEFHFTH-LIMTFKTFRPAAMLVERSADFGRTWHVYRYFSYDCGADF---PGVPLAPPRHWDDVVCESRYS-EIEPSTEGEVIYRV------------------LDPAIPIP--DPYSSRIQNLLKITNLRVNLTRLHTLGDNLLDPRREIREKYYYALYELVVRGNCFCYGHASECAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYRDLPWRPAEDGHSHACRKCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDPAVCRSCDCDPMGSQDGGRCDSHDDPALGLVSGQCRCKEHVVGTRCQQCRDGFFGLSISDRLGCRRCQCNARGTVPGSTPCDPNSGSCYCKRLVTGRGCDRCLPGHWGLSHDLLG-CRPCDCDVGGALDPQCDEGTGQCHCRQHMVGRRCEQVQPGYFRPFLDHLIWEAEDTRGQVLDVVERLVTPGETPSWTGSGFVRLQEGQTLEFLVASVPKAMDYDLLLR-----------LEPQ---------------------VPEQWAELELIVQRPGPVPAHSLCGHLVPKDDRIQGTLQPHARYLIFPNPVCLEPGISYKLHLKLVRTGGSAQPETPYSGPGLLIDSLVLLPRVLVLEMFSGGDAAALERQATFERYQCH--EEGLVPSKTSPSEACAPLLISLSTLIYNGALPCQCNPQGS-LSSECNPHGGQCLCKPGVVGRRCDLCAPGYYGFGPTGCQACQCSHEGALSSLCEKTSGQCLCRTGAFGLRCDRCQRGQWGFPSCRP-----CVCNGHADECNTHTG 891 HSP 2 Score: 90.5077 bits (223), Expect = 5.130e-18 Identity = 69/226 (30.53%), Postives = 96/226 (42.48%), Query Frame = 0 Query: 367 CQKCECFGHATACTYSAFLNQGMCSNCQDNTRGIRCDQCVERFYRNISVTLNDPKV-----CIPCDC-YAPGIMDD--GKCLQSATMNQVLGQCTCKPGIYGRRCDECIPGKWGFANPPIGTCFDCSCNIFGTINRNQICDQNSGQC-TCKVSTTGRVCDSCKDGYYKFPTSLSNECELCPCNEGGAHPS---------CNKLTGICQCRIGVMGAQCDLIKPGYF 574 C+ C C GHA C + G C C+D+T G C++C+ F+ DP++ C PC C PG C Q Q++ C C+ G G RC+ C PG +G + P G C C C+ CD ++GQC C T G C CK G++ + C C CN G +P C+ +G C C V G CD P ++ Sbjct: 874 CRPCVCNGHADECN----THTGACLGCRDHTGGEHCERCIAGFH-------GDPRLPYGGQCRPCPCPEGPGSQRHFATSCHQDEYSQQIV--CHCRAGYTGLRCEACAPGHFGDPSRPGGRCQLCECSGNIDPMDPDACDPHTGQCLRCLHHTEGPHCAHCKPGFHG--QAARQSCHRCTCNLLGTNPQQCPSPDQCHCDPSSGQCPCLPNVQGPSCDRCAPNFW 1084 HSP 3 Score: 88.9669 bits (219), Expect = 1.523e-17 Identity = 59/159 (37.11%), Postives = 76/159 (47.80%), Query Frame = 0 Query: 424 IPCDCYAPGIMDDGKCLQSATMNQVLGQCTCKPGIYGRRCDECIPGKWGFANPPIGTCFDCSCNIFGTINRNQICDQNSGQCTCKVSTTGRVCDSCKDGYYKFPTSLSNECELCPCNEGGAHPSCNKLTGIC-QCRIGVMGAQCDLIKPGYFF-PNFTY 580 +PC C G + S+ N GQC CKPG+ GRRCD C PG +GF P G C C C+ G + + +C++ SGQC C+ G CD C+ G + FP+ C C CN G CN TG C CR G C+ G+ P Y Sbjct: 781 LPCQCNPQGSL-------SSECNPHGGQCLCKPGVVGRRCDLCAPGYYGFG--PTG-CQACQCSHEGAL--SSLCEKTSGQCLCRTGAFGLRCDRCQRGQWGFPS-----CRPCVCN--GHADECNTHTGACLGCRDHTGGEHCERCIAGFHGDPRLPY 920 HSP 4 Score: 84.7297 bits (208), Expect = 2.941e-16 Identity = 72/255 (28.24%), Postives = 101/255 (39.61%), Query Frame = 0 Query: 333 CDCHHFTQGVDCGECKPLYRNRLWMAGNATNANPCQKCECFGHATACTYSAF-LNQGMCSNCQDNTRGIRCDQCVERFYRNISVTLNDPKVCIPCDCYAPGI-------MDDGKCLQSATMNQVLGQCTCKPGIYGRRCDECIPGKWGFANPPIGTCFDCSCNIFGTINRNQICDQNSGQCTCKVSTTGRVCDSCKDGYYKFPTSLSNECELCPCNEGGAH-PSCNKLTGICQCRIGVMGAQCDLIKPGY--FFP 576 C C G+ C C P + + CQ CEC G+ A + G C C +T G C C F+ + + C C C G D C S+ GQC C P + G CD C P W + C C+C+ + R C++ +GQC C+ GR C C++ ++ P +C C C+ G P C++ TG C CR GV G +CD G+ FP Sbjct: 954 CHCRAGYTGLRCEACAPGH-----FGDPSRPGGRCQLCECSGNIDPMDPDACDPHTGQCLRCLHHTEGPHCAHCKPGFHGQAAR-----QSCHRCTCNLLGTNPQQCPSPDQCHCDPSS------GQCPCLPNVQGPSCDRCAPNFWNLTS--GHGCQPCACHP--SRARGPTCNEFTGQCHCRAGFGGRTCSECQELHWGDP---GLQCHACDCDSRGIDTPQCHRFTGHCSCRPGVSGVRCDQCARGFSGIFP 1185 The following BLAST results are available for this feature:
BLAST of TCONS_00064021-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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