TCONS_00064022-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064022-protein
Unique NameTCONS_00064022-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length605

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064022-protein ID=TCONS_00064022-protein|Name=TCONS_00064022-protein|organism=Clytia hemisphaerica|type=polypeptide|length=605bp
MNKWNRSQSPSAIPRLLQKRPLFGSADSIPRTPSPVKTKPGSKLPTPTIR
KTNSTPNLKRGEILSDSASSNKETFQIKSVSIDDSRNNSISTEPFEELLM
PSSHKLIHDSDSDDDKRESFLSGGHGEDNWLLSDGGNKIQPLLEMDVLVE
ESDFEDDDLPEDAETGVNRIENGACSSNRDFVIHQNVAGPLKNHDVATIE
IQHNRAQIESCLDDQEPLSRETAVPTESGFLQQATKENVMYITENLIKRI
TKVADLNSIKKLNLCVAKQWKRKIQFIENLEPLRNLEMLKLSNNFITKIQ
KLNTLVNLRYLDLSMNQITNVEGLETLVNLESLYLDYNHIESFPNWFGKK
MRSLQTFSISNNRFTKLDEFVKLASLSNLSLLDIRDNPCCRLNHLESFVV
FHLRSLNTINGKVICIEMRNMADQRFSKDEIDCREKQINELQKQNTALLK
ENRKLTESQNQTGNIEKKLIDKVKTLKKSLHTCTQDLETKNGLLESKTTE
LNKACEKQYKLEQELAFYKLDAKFDEMWQMPPREGNEMETEEFNEHAYIG
KARYKKASLPKDNIILNEEQSMRFSSFLSRLNPTQFRENENICTALEQAL
DIDLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040146XLOC_040146Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064022TCONS_00064022Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675L_dom-like
IPR001611Leu-rich_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 431..458
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 327..356
e-value: 100.0
score: 7.3
coord: 283..304
e-value: 8.9
score: 15.3
coord: 305..326
e-value: 0.0022
score: 27.3
NoneNo IPR availablePFAMPF14580LRR_9coord: 310..438
e-value: 1.2E-12
score: 47.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..73
NoneNo IPR availableSUPERFAMILY52075Outer arm dynein light chain 1coord: 273..425
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 305..326
e-value: 46.0
score: 7.8
coord: 283..304
e-value: 180.0
score: 2.9
coord: 327..349
e-value: 0.25
score: 20.4
coord: 351..373
e-value: 190.0
score: 2.8
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 265..462
e-value: 1.5E-29
score: 101.7
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 329..350
score: 7.766
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 378..399
score: 5.094
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 285..306
score: 8.728
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 353..374
score: 6.888
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 307..328
score: 9.853

Blast
[Close]
BLAST of TCONS_00064022-protein vs. Swiss-Prot (Human)
Match: CNTRL (Centriolin OS=Homo sapiens GN=CNTRL PE=1 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 1.366e-64
Identity = 138/341 (40.47%), Postives = 207/341 (60.70%), Query Frame = 0 
Query:  238 NVMYITENLIKRITKVADLNSIKKLNLCVAKQWKRKIQFIENLEPLRNLEMLKLSNNFITKIQKLNTLVNLRYLDLSMNQITNVEGLETLVNLESLYLDYNHIESFPNWFGKKMRSLQTFSISNNRFTKLDEFVKLASLSNLSLLDIRDNPCCRLNHLESFVVFHLRSLNTINGKVICIEMRNMADQRFSKDEIDCREKQINELQKQNTALL-KENRKLTESQNQTGNIEKKLIDKVKTLKKSLHTCTQDLETKNGLLESKTTELNKACEKQYKLEQELAFYKLDAKFDEMWQMPPREGNEMETEEFNEHAYIGKARYKKASLPKDNIILNEEQSMRFSSF 577
             V YITE LIK++TK  +L  IK LNL ++K   +K ++IENLE    LE+L LS N I KI+KL+ L+ LR L+LS N+I+ +EG+E + NL+ L L  N IE  P W GKK++SL+  ++  N+ + L +  KL  L +L  L + +NP   L H   F +FHLRSL ++ G+ +  + R  A +RFS +E++  E+ + +   +   L  K+ R L E +NQ   + K L ++    K+S      DL TKN LL+ KT EL +AC+KQY+LEQELAFYK+DAKF+ +    P E  E++    +E  YIGK+RYK+     ++ I++  Q+++    
Sbjct:   79 GVRYITEALIKKLTKQDNLALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLLKLRELNLSYNKISKIEGIENMCNLQKLNLAGNEIEHIPVWLGKKLKSLRVLNLKGNKISSLQDISKLKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVERLERDLEKKMIETEELKSKQTRFLEEIKNQ-DKLNKSLKEEAMLQKQSCEELKSDLNTKNELLKQKTIELTRACQKQYELEQELAFYKIDAKFEPL-NYYPSEYAEIDKAP-DESPYIGKSRYKRNMFATESYIIDSAQAVQIKKM 416
The following BLAST results are available for this feature:
BLAST of TCONS_00064022-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNTRL1.366e-6440.47Centriolin OS=Homo sapiens GN=CNTRL PE=1 SV=2[more]
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