TCONS_00064212-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064212-protein
Unique NameTCONS_00064212-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length332

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064212-protein ID=TCONS_00064212-protein|Name=TCONS_00064212-protein|organism=Clytia hemisphaerica|type=polypeptide|length=332bp
MASTNIQPSQQMISSSFGAVLVALFTTPFEVIKVRMQAQLKPTAVKCSIF
ENVVDTLCYCTTKPAFNSPVLCTIHSNIQTVPPFRSSTDAFIKIVQREGV
FNLWKGLSATLVQMLPQTVIYYTAYDQMKVWLGFMEGKQNVSSTLVAGVT
SRSFAVICVSPIEMIRTKFQSKSRLGYKEMCSMILFTIKQDGVFSMWRGV
GPTLLRDVPFSALYWLSYEKLKSLNSAPNFLYYFMAGALSGVVAAVATQP
FDVVKTYRQIELGEIKDVSSAKKLPFTFSILNDLRKVQGLSSLYTGMNPR
LLKVAPACAIMISTYEYGKSYFAKKNDDKDVG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040258XLOC_040258Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064212TCONS_00064212Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 229..326
e-value: 1.7E-19
score: 69.4
coord: 140..224
e-value: 8.4E-18
score: 64.0
coord: 6..132
e-value: 1.5E-16
score: 60.0
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 10..131
score: 18.523
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 228..321
score: 20.539
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 139..224
score: 20.99
IPR023395Mitochondrial carrier domainGENE3D1.50.40.10coord: 2..322
e-value: 4.5E-73
score: 245.0
IPR023395Mitochondrial carrier domainSUPERFAMILY103506Mitochondrial carriercoord: 79..317
coord: 6..45

Blast
[Close]
BLAST of TCONS_00064212-protein vs. Swiss-Prot (Human)
Match: S2540 (Solute carrier family 25 member 40 OS=Homo sapiens GN=SLC25A40 PE=1 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 8.510e-84
Identity = 144/333 (43.24%), Postives = 203/333 (60.96%), Query Frame = 0 
Query:    6 IQPSQQMISSSFGAVLVALFTTPFEVIKVRMQAQLKPTAV-KCSIFEN-VVDTLCYCT---TKPAFNSPVLCTIHSNIQTVPPFRSSTDAFIKIVQREGVFNLWKGLSATLVQMLPQTVIYYTAYDQMKVWLGFMEGKQNVSSTLVAGVTSRSFAVICVSPIEMIRTKFQSKSRLGYKEMCSMILFTIKQDGVFSMWRGVGPTLLRDVPFSALYWLSYEKL------KSLNSAPNFLYYFMAGALSGVVAAVATQPFDVVKTYRQIELGEIKDVSSAKKLPF-TFSILNDLRKVQGLSSLYTGMNPRLLKVAPACAIMISTYEYGKSYFAKKN 326
            + P QQM++S  GA+L ++  TP +V+K+R+QAQ  P    KC ++ N ++D LC C     K  +  P       N      F+ + DAF KI++ EG+ +LW GL  TLV  +P TVIY+T YDQ+   L    G+      +VAG+ +R  AV  +SP+E+IRTK QSK +  Y E+   +   + +DG  S+WRG  PT+LRDVPFSA+YW +YE L      KS    P F+  F +GALSG  AAVAT PFDVVKT +Q +L   +    +  L   T+ I+ ++    G S L++G+ PRL+K+APACAIMISTYE+GK++F K+N
Sbjct:   13 VTPLQQMLASCTGAILTSVIVTPLDVVKIRLQAQNNPLPKGKCFVYSNGLMDHLCVCEEGGNKLWYKKP------GN------FQGTLDAFFKIIRNEGIKSLWSGLPPTLVMAVPATVIYFTCYDQLSALLRSKLGENETCIPIVAGIVARFGAVTVISPLELIRTKMQSK-KFSYVELHRFVSKKVSEDGWISLWRGWAPTVLRDVPFSAMYWYNYEILKKWLCEKSGLYEPTFMINFTSGALSGSFAAVATLPFDVVKTQKQTQLWTYESHKISMPLHMSTWIIMKNIVAKNGFSGLFSGLIPRLIKIAPACAIMISTYEFGKAFFQKQN 332
The following BLAST results are available for this feature:
BLAST of TCONS_00064212-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S25408.510e-8443.24Solute carrier family 25 member 40 OS=Homo sapiens... [more]
back to top