TCONS_00064219-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064219-protein
Unique NameTCONS_00064219-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length585

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064219-protein ID=TCONS_00064219-protein|Name=TCONS_00064219-protein|organism=Clytia hemisphaerica|type=polypeptide|length=585bp
MSGITRLARPLLRSTKTPTRFAQACFSTTYSQNAPKEIKTGTEARALMLK
GVDLLADTVAVTLGPKGKNVLIEQSFGGPKITKDGVTVAKAIDLPDKYMN
MGARLVQDVANNTNEEAGDGTTTATVLARAIAKSGFEAVSKGANPNEVRR
GVMTAVETVTQGLKDMSKQVTTSEEIAQVASISANNDTTVGSLISSAMER
VGKDGVITVKDGKTVADELEVIEGMKFDRGYISPYFINSAKGQKVEYENA
LVLISQAKISNVQDIVPALELANQQKRALLILAEDVDSEALTALVINRLK
IGLQVVAVKAPGFGDNRKNTLRDIAISTGAELFGDDMGLKLDEIQLNDLG
QVGELVVTKDDCLMMKGRGDSNAIDARVSQIKEEIHETNSDYEREKFQER
LAKLVGGVAVIKVGGGSEVEVNERKDRVTDALNATRAAAEEGIVPGGGTA
LIRCASLLDGLTPKNDDQKTGIEIVRSALYKPCTNIVSNTGIEPAVIVQK
VAASEDPEFGYNAANGEFVNLVDAGVIDPSKVVRIALNDAAGVASLLTTA
EAVITEIPKEEPPMPPMGGGMGGMGGMGGMGGGMF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040261XLOC_040261Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064219TCONS_00064219Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001844Chaprnin_Cpn60
IPR027413GROEL-like_equatorial
IPR027409GroEL-like_apical_dom
IPR002423Cpn60/TCP-1
IPR018370Chaperonin_Cpn60_CS
Vocabulary: Biological Process
TermDefinition
GO:0042026protein refolding
GO:0006457protein folding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0042026 protein refolding
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001844Chaperonin Cpn60PRINTSPR00298CHAPERONIN60coord: 59..85
score: 65.65
coord: 300..323
score: 60.12
coord: 382..407
score: 60.27
coord: 430..451
score: 79.71
coord: 115..142
score: 58.75
IPR001844Chaperonin Cpn60TIGRFAMTIGR02348TIGR02348coord: 36..560
e-value: 2.9E-213
score: 707.1
IPR001844Chaperonin Cpn60HAMAPMF_00600CH60coord: 34..580
score: 35.606
IPR027413GroEL-like equatorial domainGENE3D1.10.560.10coord: 25..218
e-value: 5.0E-39
score: 133.5
IPR027413GroEL-like equatorial domainGENE3D1.10.560.10coord: 406..548
e-value: 3.2E-21
score: 75.4
IPR027409GroEL-like apical domainGENE3D3.50.7.10coord: 219..405
e-value: 3.8E-85
score: 283.6
IPR027409GroEL-like apical domainSUPERFAMILY52029GroEL apical domain-likecoord: 217..408
IPR002423Chaperonin Cpn60/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 55..556
e-value: 8.5E-83
score: 278.5
IPR018370Chaperonin Cpn60, conserved sitePROSITEPS00296CHAPERONINS_CPN60coord: 437..448
NoneNo IPR availableCDDcd03344GroELcoord: 36..556
e-value: 0.0
score: 828.636
NoneNo IPR availableSUPERFAMILY54849GroEL-intermediate domain likecoord: 170..235
NoneNo IPR availableSUPERFAMILY48592GroEL equatorial domain-likecoord: 438..554
coord: 39..166

Blast
[Close]
BLAST of TCONS_00064219-protein vs. Swiss-Prot (Human)
Match: CH60 (60 kDa heat shock protein, mitochondrial OS=Homo sapiens GN=HSPD1 PE=1 SV=2)

HSP 1 Score: 716.072 bits (1847), Expect = 0.000e+0
Identity = 357/552 (64.67%), Postives = 447/552 (80.98%), Query Frame = 0 
Query:   16 KTPTRFAQA-----CFSTTYSQNAPKEIKTGTEARALMLKGVDLLADTVAVTLGPKGKNVLIEQSFGGPKITKDGVTVAKAIDLPDKYMNMGARLVQDVANNTNEEAGDGTTTATVLARAIAKSGFEAVSKGANPNEVRRGVMTAVETVTQGLKDMSKQVTTSEEIAQVASISANNDTTVGSLISSAMERVGKDGVITVKDGKTVADELEVIEGMKFDRGYISPYFINSAKGQKVEYENALVLISQAKISNVQDIVPALELANQQKRALLILAEDVDSEALTALVINRLKIGLQVVAVKAPGFGDNRKNTLRDIAISTGAELFGDD-MGLKLDEIQLNDLGQVGELVVTKDDCLMMKGRGDSNAIDARVSQIKEEIHETNSDYEREKFQERLAKLVGGVAVIKVGGGSEVEVNERKDRVTDALNATRAAAEEGIVPGGGTALIRCASLLDGLTPKNDDQKTGIEIVRSALYKPCTNIVSNTGIEPAVIVQKVAASEDPEFGYNAANGEFVNLVDAGVIDPSKVVRIALNDAAGVASLLTTAEAVITEIPKEE 561
            + PT F Q        +   ++   K++K G +ARALML+GVDLLAD VAVT+GPKG+ V+IEQS+G PK+TKDGVTVAK+IDL DKY N+GA+LVQDVANNTNEEAGDGTTTATVLAR+IAK GFE +SKGANP E+RRGVM AV+ V   LK  SK VTT EEIAQVA+ISAN D  +G++IS AM++VG+ GVITVKDGKT+ DELE+IEGMKFDRGYISPYFIN++KGQK E+++A VL+S+ KIS++Q IVPALE+AN  ++ L+I+AEDVD EAL+ LV+NRLK+GLQVVAVKAPGFGDNRKN L+D+AI+TG  +FG++ + L L+++Q +DLG+VGE++VTKDD +++KG+GD   I+ R+ +I E++  T S+YE+EK  ERLAKL  GVAV+KVGG S+VEVNE+KDRVTDALNATRAA EEGIV GGG AL+RC   LD LTP N+DQK GIEI++  L  P   I  N G+E ++IV+K+  S   E GY+A  G+FVN+V+ G+IDP+KVVR AL DAAGVASLLTTAE V+TEIPKEE
Sbjct:    3 RLPTVFRQMRPVSRVLAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLARSIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDKEIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTSKGQKCEFQDAYVLLSEKKISSIQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLKDMAIATGGAVFGEEGLTLNLEDVQPHDLGKVGEVIVTKDDAMLLKGKGDKAQIEKRIQEIIEQLDVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVLGGGCALLRCIPALDSLTPANEDQKIGIEIIKRTLKIPAMTIAKNAGVEGSLIVEKIMQSSS-EVGYDAMAGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEVVVTEIPKEE 553
The following BLAST results are available for this feature:
BLAST of TCONS_00064219-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CH600.000e+064.6760 kDa heat shock protein, mitochondrial OS=Homo s... [more]
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