TCONS_00064231-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064231-protein
Unique NameTCONS_00064231-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length486

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064231-protein ID=TCONS_00064231-protein|Name=TCONS_00064231-protein|organism=Clytia hemisphaerica|type=polypeptide|length=486bp
MLSEDTKTNSENFLKNGEVKEMKDIKDDPSALLSSVDSKNLKIESLKELC
STEMMKAPKKEEKVESKDMAVQTEDCLWLQELIQKVVTVRVKAYQKAAEK
SERMDEKLSPVLKRLKEENRDLREKASVLKQKLQAIERYQNSAKKRPSSN
PQPVETPPKRICTTTKSPVPINTTPPAQSNIGNINKVPVTSPQPVSFASP
VRSVYIPPGPIQHAPQQFYQILPNGQRMLLQSLPTPTNDPGFVMIDPNSN
NGHYNIGTQVVVANQGLRMASSHPKDNRVQQIAQVNGKNFPGTLNPLRPP
MSRFQTNNVRLPVSWSAPPQQVRPQMMVAQRQPVPIQQPQKVQKPALQSL
PTTKTPPPKPPNSSEAHIALPFNPLPKLKASISASGSGIILTWDYEKSGE
NPDKYKVECYQLFAHQAKGNIRPPGPNESRPWKKIGNVNALPLPMACTLT
QFATGNVYYFAVVAVDIHGREGEMSNPCTIRLNLNS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040264XLOC_040264Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064231TCONS_00064231Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR013783Ig-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 112..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..367
IPR003961Fibronectin type IIIPFAMPF16794fn3_4coord: 376..478
e-value: 2.5E-27
score: 94.7
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 369..481
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 347..483
e-value: 2.5E-7
score: 30.2

Blast
[Close]
BLAST of TCONS_00064231-protein vs. Swiss-Prot (Human)
Match: MCAF1 (Activating transcription factor 7-interacting protein 1 OS=Homo sapiens GN=ATF7IP PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 6.490e-19
Identity = 61/154 (39.61%), Postives = 81/154 (52.60%), Query Frame = 0 
Query:  324 PQMMVAQRQPVPIQQPQKVQKPALQSLPTTKTPPPKPPNSSEAHIALPFNPLPKLKASISASGSGIILTWDYEKSGENPDKYKVECYQLFAHQAKGNIRPPGPNESRPWKKIGNVNALPLPMACTLTQFATGNVYYFAVVAVDIHGREGEMSNP 477
            PQ+ V  R P    +P +   PA   LP    P   PP +  A  +LP  P   LK +   S +GI+L+W   +   +     V+ Y L+A+  + +   P       WKKIG V ALPLPMACTLTQF +G+ YYFAV A DI+GR G   +P
Sbjct: 1118 PQLTVHHRPPQVHTEPPRPVHPA--PLPEAPQPQRLPPEA--ASTSLPQKP--HLKLARVQSQNGIVLSWSVLEVDRS--CATVDSYHLYAYHEEPSATVPSQ-----WKKIGEVKALPLPMACTLTQFVSGSKYYFAVRAKDIYGRFGPFCDP 1258
The following BLAST results are available for this feature:
BLAST of TCONS_00064231-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MCAF16.490e-1939.61Activating transcription factor 7-interacting prot... [more]
back to top