TCONS_00064313-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064313-protein
Unique NameTCONS_00064313-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1517

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064313-protein ID=TCONS_00064313-protein|Name=TCONS_00064313-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1517bp
MAQGSDQEVALRMELQNQINVLTHENQHYQNEYESLRQGWIKNQQETSTY
MENLQQQYQLLQTEYQQLQQQQKQAEPTPETSIDPIASSFHVGDSTPMTD
FGTAAGNSDQMQEKLHNLSLMMTEKAEECMKLQQENDTIKAKLIEIQNDS
SDMELIREECKQLKTMLMSKDHEDTISNLQLENKQLKQQIDQIQRVDLEK
DNDLSDMELLREECRQLKLMLVNKDSPAQYQALESENTQLEHSLRAKDDE
VSQLNASLIEMQNSVSDMDLVREECKQLKLMLMNQQQQSPQTQQQQSPMS
EESYKLLEAKLQSKEDELKQKDSIIFEMQNTSGDVELLKQQCEQLKSMLS
EKENTLNESNLSMINNTEMENSFMVQVKQLEEVMKEKESKITELQNTLSD
MEYLQNECRVLKEMITEKETMFGELQNDLDLANNVIEQRHNDLSVKNTEC
KLLRDQLKEMSETMASKESEMVGLREEMSEAVLQDENIHMLQTEYRNVEE
QLKSKEKELQETQERLFNAETHCDRLKVYEEQYQGLKDTLKDKDAELSNL
QLQSSESSIFESETVTLMQQELNQLKTLLYEKENELEELRKVLEKKNLEI
QELMQNHQQIKNDLMSEXIQELMQNRQQIKNDLMSEQNRVRELMDERNKD
QEEHQQSSAAGNTDQLESQIMYHKSMADELAKTNKELSANLKTLESRYHE
SLAEVDSLKKENDELIAGQKQLQQALFEAKQSGDSGRSSPVSAVGGGVKF
GVLKRKIKELEDTNATLQNEILSLKQHGPVVSPVTAELTNTSNNSLSDSE
YQELLSEKQSLLEQFKQMENQLKVTANALQDQTLENQQLQTYIQQSEQNH
KEALEQMNSQNNENQQSTQSLNQEKQIIDTFVNNLRNLLQMSSTSGQDST
NEFGEITQQVQQMVYTLQQKDTLLAERSNEVTNLSDQIRALGEAKSNYEF
RMTDLQSQLLEYQELVTMYKAKCTECENLQSSLQQTSSQLQQGSLQTSEE
SDHLRDELTKNSHSLLAKNRECDDLKLEILKLEEKVFNQEQSLNQVQGVE
GLHMKIQELNVLCQRKEQENQQLQSQLEDNQAVFENSKKEKAFIDQLLRE
KGTLETERNELVFQRDQLTNRLQEQDVELKHNTTNTKEVEVKTKRELERL
RNHLMMIEENHTKDILECQQREDTLRAELDEARETLGKKSIILQDSSKQF
QEHVGTLEEQLHTIAAQRDANTFELDKSKHQIERDASAIYNLQNALEQLQ
REKDEQYEYLVSVDQKKVQNYESRIDELMQEQEKSQVAMSEASLAVQGIA
KLNLELEQKDRELQASNEKAVELSTSLQERDMQYNKILQASDGKMEKSLI
RNLLEKYFQAPEDKRGDIVKVIGGLLGMSHDQIKQIGTGAAPSKVGGWIS
NVWGYAATPSKKENEQAANRPPVDPNQSFSEMFIKFLEHESTNRQPPVDS
SASLANAANVPMPANMLMLSSTTPDILAFHNKTNEELNSSSTIPAPGQEI
PRVHTHHAQSTLKTLLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040320XLOC_040320Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064313TCONS_00064313Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000237GRIP_dom
Vocabulary: Biological Process
TermDefinition
GO:0000042protein targeting to Golgi
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000042 protein targeting to Golgi
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1299..1326
NoneNo IPR availableCOILSCoilCoilcoord: 230..250
NoneNo IPR availableCOILSCoilCoilcoord: 619..653
NoneNo IPR availableCOILSCoilCoilcoord: 169..199
NoneNo IPR availableCOILSCoilCoilcoord: 1140..1160
NoneNo IPR availableCOILSCoilCoilcoord: 488..522
NoneNo IPR availableCOILSCoilCoilcoord: 801..874
NoneNo IPR availableCOILSCoilCoilcoord: 1015..1042
NoneNo IPR availableCOILSCoilCoilcoord: 1232..1259
NoneNo IPR availableCOILSCoilCoilcoord: 268..288
NoneNo IPR availableCOILSCoilCoilcoord: 377..404
NoneNo IPR availableCOILSCoilCoilcoord: 1261..1288
NoneNo IPR availableCOILSCoilCoilcoord: 12..39
NoneNo IPR availableCOILSCoilCoilcoord: 450..484
NoneNo IPR availableCOILSCoilCoilcoord: 526..553
NoneNo IPR availableCOILSCoilCoilcoord: 677..725
NoneNo IPR availableCOILSCoilCoilcoord: 328..362
NoneNo IPR availableCOILSCoilCoilcoord: 1165..1185
NoneNo IPR availableCOILSCoilCoilcoord: 750..777
NoneNo IPR availableCOILSCoilCoilcoord: 51..71
NoneNo IPR availableCOILSCoilCoilcoord: 304..324
NoneNo IPR availableCOILSCoilCoilcoord: 115..149
NoneNo IPR availableCOILSCoilCoilcoord: 565..617
NoneNo IPR availableCOILSCoilCoilcoord: 1049..1090
NoneNo IPR availableGENE3D1.20.120.330coord: 887..1018
e-value: 1.6E-4
score: 20.8
NoneNo IPR availableGENE3D1.20.58.60coord: 322..462
e-value: 4.8E-4
score: 19.6
NoneNo IPR availableGENE3D1.10.287.620coord: 463..614
e-value: 1.9E-5
score: 23.7
NoneNo IPR availableGENE3D1.20.1170.10coord: 615..886
e-value: 7.6E-9
score: 34.4
NoneNo IPR availableGENE3D1.20.5.1000coord: 12..77
e-value: 4.7E-4
score: 19.6
NoneNo IPR availableGENE3D1.20.5.170coord: 1192..1296
e-value: 0.16
score: 11.6
IPR000237GRIP domainPROSITEPS50913GRIPcoord: 1340..1389
score: 9.802

Blast
[Close]
BLAST of TCONS_00064313-protein vs. Swiss-Prot (Human)
Match: TRIPB (Thyroid receptor-interacting protein 11 OS=Homo sapiens GN=TRIP11 PE=1 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 7.279e-36
Identity = 127/427 (29.74%), Postives = 221/427 (51.76%), Query Frame = 0 
Query: 1084 FE-NSKKEKAF-IDQLLREKGTLET-ERNEL------------VFQ--RDQLTNRLQEQDVE---LKHNTTNTKEVEVKTKRELERLRNHLMMIEENHTKDILECQQREDTLRAELDEARETLGKKSIILQDSSKQFQEHVGTLEEQLHTIAAQRDANTFELDKSKHQIERDASAIYNLQNALEQLQREKDEQYEY-------LVSVDQKKVQNYESRIDELMQEQEKSQVAMSEASLAVQGIAKLNLELEQKD---RELQASNEKAVELSTSLQERDMQYNKILQASDGKMEKSLIRNLLEKYFQAPEDKRGDIVKVIGGLLGMSHDQIKQI---GTGAAPSKVGGWISNVWGYAATPSKKENEQAANRPPVDPNQ------SFSEMFIKFLEHESTNRQP----------PVDSSASLANAANVP 1461
            FE +S KEKA   +QLL+EK   +T E N+L            VFQ  RDQ+   L+++ +E   L++     ++ E ++ +ELERLRNHL+  E+++T++ L  + RE  LR ++    E L   S  ++++S Q    V +L+EQL+ ++ QRD    +L  S+ Q+++ A ++ NLQ  LE  Q+E+   Y         L++  +K  +N E ++  L       Q  + EA+ A+   ++L  +L+ K+    EL+  NE   E+   +Q++ M    +  +S+GK++K L+RNL   +F  P+++R ++++++G +LG+  ++++Q+     G     + GW+    G  + P+           P+ PNQ      SFSE+F+KFLE ES    P          P+DS        N P
Sbjct: 1498 FECHSMKEKALAFEQLLKEKEQGKTGELNQLLNAVKSMQEKTVVFQQERDQVMLALKQKQMENTALQNEVQRLRDKEFRSNQELERLRNHLLESEDSYTREALAAEDREAKLRKKVTVLEEKLVSSSNAMENASHQASVQVESLQEQLNVVSKQRDETALQLSVSQEQVKQYALSLANLQMVLEHFQQEEKAMYSAELEKQKQLIAEWKKNAENLEGKVISL-------QECLDEANAALDSASRLTEQLDVKEEQIEELKRQNELRQEMLDDVQKKLM---SLANSSEGKVDKVLMRNLFIGHFHTPKNQRHEVLRLMGSILGVRREEMEQLFHDDQGGVTRWMTGWLGG--GSKSVPN----------TPLRPNQQSVVNSSFSELFVKFLETESHPSIPPPKLSVHDMKPLDSPGRRKRDTNAP 1902
The following BLAST results are available for this feature:
BLAST of TCONS_00064313-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRIPB7.279e-3629.74Thyroid receptor-interacting protein 11 OS=Homo sa... [more]
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