Znf Zn-finger transcription factor (polypeptide) - C. hemisphaerica

Overview
NameZnf Zn-finger transcription factor
Unique NameTCONS_00064345-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length549

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064345-protein ID=TCONS_00064345-protein|Name=Znf Zn-finger transcription factor|organism=Clytia hemisphaerica|type=polypeptide|length=549bp
MSCLFEIQRNLNIQKNNELLRAYGLPEMNVSVESFSSEDIEKRFGYLGED
NNNNAINSESNFVETFKDDSDSDDASDSNSSDSGDESDATYRDVVLSDLD
DDDEEGGDIIVVDNDVSDPDFIPDFISTNSHRDIEYISSDDEVVIFDENN
NVISERYNATKTVIYGQSNVNGLKKDVNNIKNDVNVQEDDVIKIRDFKII
IKMEDTNHMTQTSDASNVSGDRTVNKVGYFGELETIEPPVKFNPIVKLDR
IVLKDHASTKKQQWPHICDICDKDFPWPSELRRHREAVHMKQKPFACPTC
GSSFSKKSHLKEHAMSHTDERPFPCDICGKRFKLKHHLKTHLKLHPSEEP
YKCDICEKRYSTTEELSICLRVHAGEKRYQCDICGKDYNLRTRYLAHLAT
HENKRDFKCEQCPKTFTAHRYLYEHKRRCHLQNRRTYLCPHCGRAFKDSS
NMKRHQLTHELTATYKCGQCEAKYRRKGDLKQHLLRHEASDGKPYQCDVC
GTKFAQKNHLCKHQRSIHCQIKASVDESKPFVCRACGKRLKSADTLRRH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040345XLOC_040345Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064345TCONS_00064345Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..190
NoneNo IPR availableGENE3D2.20.28.30coord: 475..507
e-value: 3.1E-9
score: 36.4
NoneNo IPR availableGENE3D3.30.300.90coord: 408..449
e-value: 7.9E-11
score: 41.2
NoneNo IPR availableGENE3D3.30.160.60coord: 450..474
e-value: 3.3E-12
score: 46.1
coord: 279..303
e-value: 3.7E-16
score: 58.7
NoneNo IPR availableGENE3D2.20.28.10coord: 387..407
e-value: 1.0E-7
score: 31.2
NoneNo IPR availableGENE3D3.30.160.60coord: 127..278
e-value: 2.5E-6
score: 27.3
coord: 508..534
e-value: 8.1E-12
score: 44.9
NoneNo IPR availableGENE3D2.20.28.10coord: 304..331
e-value: 1.7E-17
score: 62.9
coord: 332..358
e-value: 3.9E-14
score: 52.1
NoneNo IPR availableGENE3D2.20.28.10coord: 377..386
e-value: 4.6E-4
score: 19.4
NoneNo IPR availableGENE3D3.30.160.60coord: 535..549
e-value: 0.0015
score: 18.3
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 437..459
e-value: 1.3E-5
score: 25.3
coord: 323..345
e-value: 9.7E-4
score: 19.4
coord: 295..317
e-value: 0.0011
score: 19.2
coord: 465..487
e-value: 0.003
score: 17.8
coord: 495..518
e-value: 2.5E-4
score: 21.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..91
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 407..430
e-value: 0.25
score: 20.4
coord: 266..289
e-value: 0.0027
score: 26.9
coord: 295..317
e-value: 0.0063
score: 25.7
coord: 351..373
e-value: 16.0
score: 11.4
coord: 495..518
e-value: 0.0013
score: 28.0
coord: 437..459
e-value: 8.3E-4
score: 28.6
coord: 531..549
e-value: 290.0
score: 0.4
coord: 323..345
e-value: 0.0049
score: 26.1
coord: 465..487
e-value: 0.0085
score: 25.3
coord: 379..401
e-value: 0.046
score: 22.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 325..345
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 497..518
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 409..430
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 381..401
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 268..289
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 439..459
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 297..317
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 437..459
score: 12.03
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 266..294
score: 12.383
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 351..378
score: 11.053
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 465..492
score: 9.473
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 323..350
score: 14.295
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 295..322
score: 15.272
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 531..549
score: 9.265
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 407..435
score: 11.718
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 379..406
score: 11.032
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 495..523
score: 12.778
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 303..360
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 360..416
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 263..313
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 433..483
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 474..538
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 359..376
e-value: 8.2E-11
score: 41.3

Blast
BLAST of Znf Zn-finger transcription factor vs. Swiss-Prot (Human)
Match: ZN287 (Zinc finger protein 287 OS=Homo sapiens GN=ZNF287 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.451e-56
Identity = 130/347 (37.46%), Postives = 175/347 (50.43%), Query Frame = 0
Query:  210 TQTSDASNV--SGDRTVNKVGYFGELETIEP---PVKFNPIVKLDRIV--LKDHASTKKQQWPHICDICDKDFPWPSELRRHREAVHMKQKPFACPTCGSSFSKKSHLKEHAMSHTDERPFPCDICGKRFKLKHHLKTHLKLHPSEEPYKCDICEKRYSTTEELSICLRVHAGEKRYQCDICGKDYNLRTRYLAHLATHENKRDFKCEQCPKTFTAHRYLYEHKRRCHLQNRRTYLCPHCGRAFKDSSNMKRHQLTHELTATYKCGQCEAKYRRKGDLKQHLLRHEASDGKPYQCDVCGTKFAQKNHLCKHQRSIHCQIKASVDESKPFVCRACGKRLKSADTLRRH 549
            TQ  + ++V   G  T N V Y      I P   P K N   K  R    L  H ST  ++  + C+ C K+F   S L  H + +H  +KP+ C  CG +FS+++HL  H   HT E+P+ CD CGK F  + HL  H + H  E+PYKC  C K +S +  L    RVH GEK Y C+ CGK ++  T  L H   H  K+ +KC +C K F+   YL  H+ R H    + Y C  CG+AF  SS + +HQ TH    +Y C  C   + +  +L QH   H     KPY+C VCG  F+Q  HL +HQR IH       +  KPF C  CGK  +    L +H
Sbjct:  326 TQLDNKTSVYNEGRATFNHVSYGIVHRKILPGEKPYKCNVCGKKFRKYPSLLKHQSTHAKEKSYECEECGKEFRHISSLIAH-QRMHTGEKPYECHQCGKAFSQRAHLTIHQRIHTGEKPYKCDDCGKDFSQRAHLTIHQRTHTGEKPYKCLECGKTFSHSSSLINHQRVHTGEKPYICNECGKTFSQSTHLLQHQKIHTGKKPYKCNECWKVFSQSTYLIRHQ-RIH-SGEKCYKCNECGKAFAHSSTLIQHQTTHTGEKSYICNICGKAFSQSANLTQHHRTHTGE--KPYKCSVCGKAFSQSVHLTQHQR-IH-------NGEKPFKCNICGKAYRQGANLTQH 659          

HSP 2 Score: 173.711 bits (439), Expect = 1.567e-46
Identity = 114/380 (30.00%), Postives = 175/380 (46.05%), Query Frame = 0
Query:  193 KIRDFKIIIKMEDTNHMTQTSDASNVSGD-RTVNKVGYFGELETIEPPVKFNPIVKL--DRIVLKDHASTKKQQWPHICDICDKDFPWPSELRRHREAVHMKQKPFACPTCGSSFSKKSHLKEHAMSHTDERPFPCDICGKRFKLKHHLKTHLKLHPSEEPYKCDICEKRYSTTEELSICLRVHAGEKRYQCDICGKDYNLRTRYLAHLATHENKRDFKCEQCPKTFTAHRYLYEHKRRCHLQNRRTYLCPHCGRAFKDSSNMKRHQLTHELTATYKCGQCEAKYRRKGDLKQHLLRHEASDGKPYQCDVCGTKFAQKNHLCKHQRSIHCQIKASVDE--------------------SKPFVCRACGKRLKSADTLRRH 549
            K R +  ++K + T+   ++ +      + R ++ +     + T E P + +   K    R  L  H      + P+ CD C KDF   + L  H +  H  +KP+ C  CG +FS  S L  H   HT E+P+ C+ CGK F    HL  H K+H  ++PYKC+ C K +S +  L    R+H+GEK Y+C+ CGK +   +  + H  TH  ++ + C  C K F+    L +H R       + Y C  CG+AF  S ++ +HQ  H     +KC  C   YR+  +L QH   H     KPY+C+ CG  F   + L +HQR+   +     +E                     KP+ CR CGK    +  L +H
Sbjct:  369 KFRKYPSLLKHQSTHAKEKSYECEECGKEFRHISSLIAHQRMHTGEKPYECHQCGKAFSQRAHLTIHQRIHTGEKPYKCDDCGKDFSQRAHLTIH-QRTHTGEKPYKCLECGKTFSHSSSLINHQRVHTGEKPYICNECGKTFSQSTHLLQHQKIHTGKKPYKCNECWKVFSQSTYLIRHQRIHSGEKCYKCNECGKAFAHSSTLIQHQTTHTGEKSYICNICGKAFSQSANLTQHHRT--HTGEKPYKCSVCGKAFSQSVHLTQHQRIHNGEKPFKCNICGKAYRQGANLTQHQRIHTGE--KPYKCNECGKAFIYSSSLNQHQRTHTGERPYKCNECDKDFSQRTCLIQHQRIHTGEKPYACRICGKTFTQSTNLIQH 743          

HSP 3 Score: 158.688 bits (400), Expect = 2.614e-41
Identity = 90/263 (34.22%), Postives = 135/263 (51.33%), Query Frame = 0
Query:  253 LKDHASTKKQQWPHICDICDKDFPWPSELRRHREAVHMKQKPFACPTCGSSFSKKSHLKEHAMSHTDERPFPCDICGKRFKLKHHLKTHLKLHPSEEPYKCDICEKRYSTTEELSICLRVHAGEKRYQCDICGKDYNLRTRYLAHLATHENKRDFKCEQCPKTFTAHRYLYEHKRRCHLQNRRTYLCPHCGRAFKDSSNMKRHQLTHELTATYKCGQCEAKYRRKGDLKQHLLRHEASDGKPYQCDVCGTKFAQKNHLCKHQR 515
            L +H      + P+IC+ C K F   + L +H++ +H  +KP+ C  C   FS+ ++L  H   H+ E+ + C+ CGK F     L  H   H  E+ Y C+IC K +S +  L+   R H GEK Y+C +CGK ++       H   H  ++ FKC  C K +     L +H+R  H    + Y C  CG+AF  SS++ +HQ TH     YKC +C+  + ++  L QH   H     KPY C +CG  F Q  +L +HQR
Sbjct:  488 LINHQRVHTGEKPYICNECGKTFSQSTHLLQHQK-IHTGKKPYKCNECWKVFSQSTYLIRHQRIHSGEKCYKCNECGKAFAHSSTLIQHQTTHTGEKSYICNICGKAFSQSANLTQHHRTHTGEKPYKCSVCGKAFSQSVHLTQHQRIHNGEKPFKCNICGKAYRQGANLTQHQR-IHT-GEKPYKCNECGKAFIYSSSLNQHQRTHTGERPYKCNECDKDFSQRTCLIQHQRIHTGE--KPYACRICGKTFTQSTNLIQHQR 745          

HSP 4 Score: 139.043 bits (349), Expect = 9.979e-35
Identity = 71/192 (36.98%), Postives = 107/192 (55.73%), Query Frame = 0
Query:  268 CDICDKDFPWPSELRRHREAVHMKQKPFACPTCGSSFSKKSHLKEHAMSHTDERPFPCDICGKRFKLKHHLKTHLKLHPSEEPYKCDICEKRYSTTEELSICLRVHAGEKRYQCDICGKDYNLRTRYLAHLATHENKRDFKCEQCPKTFTAHRYLYEHKRRCHLQNRRTYLCPHCGRAFKDSSNMKRHQLTH 459
            C+ C K F   S L +H +  H  +K + C  CG +FS+ ++L +H  +HT E+P+ C +CGK F    HL  H ++H  E+P+KC+IC K Y     L+   R+H GEK Y+C+ CGK +   +    H  TH  +R +KC +C K F+    L +H+ R H    + Y C  CG+ F  S+N+ +HQ  H
Sbjct:  559 CNECGKAFAHSSTLIQH-QTTHTGEKSYICNICGKAFSQSANLTQHHRTHTGEKPYKCSVCGKAFSQSVHLTQHQRIHNGEKPFKCNICGKAYRQGANLTQHQRIHTGEKPYKCNECGKAFIYSSSLNQHQRTHTGERPYKCNECDKDFSQRTCLIQHQ-RIHT-GEKPYACRICGKTFTQSTNLIQHQRVH 747          

HSP 5 Score: 83.5741 bits (205), Expect = 7.603e-17
Identity = 44/127 (34.65%), Postives = 66/127 (51.97%), Query Frame = 0
Query:  251 IVLKDHASTKKQQWPHICDICDKDFPWPSELRRHREAVHMKQKPFACPTCGSSFSKKSHLKEHAMSHTDERPFPCDICGKRFKLKHHLKTHLKLHPSEEPYKCDICEKRYSTTEELSICLRVHAGEK 377
            + L  H      + P  C+IC K +   + L +H + +H  +KP+ C  CG +F   S L +H  +HT ERP+ C+ C K F  +  L  H ++H  E+PY C IC K ++ +  L    RVH G K
Sbjct:  626 VHLTQHQRIHNGEKPFKCNICGKAYRQGANLTQH-QRIHTGEKPYKCNECGKAFIYSSSLNQHQRTHTGERPYKCNECDKDFSQRTCLIQHQRIHTGEKPYACRICGKTFTQSTNLIQHQRVHTGAK 751          
The following BLAST results are available for this feature:
BLAST of Znf Zn-finger transcription factor vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN2871.451e-5637.46Zinc finger protein 287 OS=Homo sapiens GN=ZNF287 ... [more]
back to top