TCONS_00064503-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064503-protein
Unique NameTCONS_00064503-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length211

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064503-protein ID=TCONS_00064503-protein|Name=TCONS_00064503-protein|organism=Clytia hemisphaerica|type=polypeptide|length=211bp
MMTEEEQMRMELQRMQRRADEVTDESLESTRRMLALAEETQDTGIKTLVA
LDEQGEKLNRVEENLDQINADMREAEKNLTGLEKFCGLCVCSCRRKQDFE
SSEQYKKAYSKGDSSGGGAGSSGRNNMQGGYDKAPATGYIQKVTGDARED
EMDENIGQVAGIVDNLKSMAMDMGGELDKQNTQIDRITDKATANESRIDV
ANKRAENILRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040454XLOC_040454Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064503TCONS_00064503Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR000928SNAP-25
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableCOILSCoilCoilcoord: 51..85
NoneNo IPR availableGENE3D1.20.5.110coord: 159..206
e-value: 4.1E-17
score: 61.6
NoneNo IPR availableGENE3D1.20.5.110coord: 20..84
e-value: 1.7E-27
score: 94.5
coord: 102..158
e-value: 0.039
score: 13.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..137
NoneNo IPR availableCDDcd15889SNARE_SNAP25N_23Ncoord: 18..81
e-value: 1.5499E-28
score: 102.328
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 9..83
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 138..209
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 15..82
e-value: 4.0E-9
score: 46.3
coord: 141..208
e-value: 1.0E-13
score: 61.6
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 146..208
score: 17.83
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 20..82
score: 14.101
IPR000928SNAP-25PFAMPF00835SNAP-25coord: 93..147
e-value: 3.5E-6
score: 27.1

Blast
[Close]
BLAST of TCONS_00064503-protein vs. Swiss-Prot (Human)
Match: SNP25 (Synaptosomal-associated protein 25 OS=Homo sapiens GN=SNAP25 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 8.206e-77
Identity = 119/208 (57.21%), Postives = 154/208 (74.04%), Query Frame = 0 
Query:    2 MTEEEQMRMELQRMQRRADEVTDESLESTRRMLALAEETQDTGIKTLVALDEQGEKLNRVEENLDQINADMREAEKNLTGLEKFCGLCVCSCRRKQDFESSEQYKKAYSKGDSSGGGAGSSGRNNMQGGYDKAPATGYIQKVTGDAREDEMDENIGQVAGIVDNLKSMAMDMGGELDKQNTQIDRITDKATANESRIDVANKRAENIL 209
            M E+  MR EL+ MQRRAD++ DESLESTRRML L EE++D GI+TLV LDEQGE+L R+EE +DQIN DM+EAEKNLT L KFCGLCVC C +    +SS+ YKKA+  G++  G   S     +      A + G+I++VT DARE+EMDEN+ QV+GI+ NL+ MA+DMG E+D QN QIDRI +KA +N++RID AN+RA  +L
Sbjct:    1 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNK---LKSSDAYKKAW--GNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKML 203
The following BLAST results are available for this feature:
BLAST of TCONS_00064503-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNP258.206e-7757.21Synaptosomal-associated protein 25 OS=Homo sapiens... [more]
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