TCONS_00064604-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064604-protein
Unique NameTCONS_00064604-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length149

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064604-protein ID=TCONS_00064604-protein|Name=TCONS_00064604-protein|organism=Clytia hemisphaerica|type=polypeptide|length=149bp
MQTAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPAFIGMESAGIHE
TTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEISALAPPTMK
IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040513XLOC_040513Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064604TCONS_00064604Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin
IPR004001Actin_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004000Actin familySMARTSM00268actin_3coord: 1..149
e-value: 9.5E-9
score: -21.2
IPR004000Actin familyPFAMPF00022Actincoord: 3..149
e-value: 5.0E-64
score: 216.3
NoneNo IPR availableGENE3D3.30.420.40coord: 1..147
e-value: 2.0E-67
score: 225.6
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 2..149
IPR004001Actin, conserved sitePROSITEPS00432ACTINS_2coord: 130..138

Blast
[Close]
BLAST of TCONS_00064604-protein vs. Swiss-Prot (Human)
Match: ACTC (Actin, alpha cardiac muscle 1 OS=Homo sapiens GN=ACTC1 PE=1 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 1.343e-103
Identity = 141/149 (94.63%), Postives = 146/149 (97.99%), Query Frame = 0 
Query:    1 MQTAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPAFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 149
            M TAASSSSLEKSYELPDGQVITIGNERFRCPETLFQP+FIGMESAGIHETTYNSIMKCD+DIRKDLYAN VLSGGTTM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE+GPSIVHRKCF
Sbjct:  229 MATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRKCF 377
The following BLAST results are available for this feature:
BLAST of TCONS_00064604-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACTC1.343e-10394.63Actin, alpha cardiac muscle 1 OS=Homo sapiens GN=A... [more]
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