TCONS_00064842-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064842-protein
Unique NameTCONS_00064842-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length485

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064842-protein ID=TCONS_00064842-protein|Name=TCONS_00064842-protein|organism=Clytia hemisphaerica|type=polypeptide|length=485bp
MASLGQLICLTTITLLVFIKLAESSGTMEIKLLSYANPEHRMSNGRCCEE
GLEKDCKRNDKNRCIECTMECDPQFKFEMRRNNERVMFYNTSTLEHKDNF
DFKDVLEPNIHNPFMLNLSSFKGNFTFSIKSFDHDDQGIDPIDESIFQFN
TKSLDTKIQPNNETVYLCSSGKVTKTNFTIRYTCDADFYGPACDRFCLAQ
NDVKGHYTCDRASGEMICLDGWTDAKTNCTTITPSSMIIAPSTSTPTLMM
SSTVNTDASSSMMVYGSIRPTRSAIQMMTSSVVCNSTITKVNLDLKLQGE
LKLNEFNDTMQHIICIEVNKACYNLIGQCTKTSSRDQLNLKDIEILEERF
VNQTLSDFKLRISSATGKCNENFAKCARESIYNSKQLRHQLGAEKVEICT
NSKGCEQRATLLNNDRNKKEEGKDEVIIIAVLCTMFGVVVLALGLLYLRK
KRMMKIGNLEDQKSSNNNNDDEKTNIVDDKETSSC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040669XLOC_040669Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064842TCONS_00064842Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001774DSL
IPR011651Notch_ligand_N
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0007154cell communication
GO:0007275multicellular organism development
GO:0007219Notch signaling pathway
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007154 cell communication
biological_process GO:0007275 multicellular organism development
biological_process GO:0007219 Notch signaling pathway
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001774Delta/Serrate/lag-2 (DSL) proteinSMARTSM00051dsl11coord: 167..229
e-value: 1.1E-5
score: 34.8
IPR001774Delta/Serrate/lag-2 (DSL) proteinPFAMPF01414DSLcoord: 171..225
e-value: 8.3E-14
score: 51.4
IPR011651Notch ligand, N-terminal domainPFAMPF07657MNNLcoord: 25..81
e-value: 1.3E-5
score: 25.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 460..485

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064842-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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