TCONS_00064951-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064951-protein
Unique NameTCONS_00064951-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length464

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064951-protein ID=TCONS_00064951-protein|Name=TCONS_00064951-protein|organism=Clytia hemisphaerica|type=polypeptide|length=464bp
MKKYDGKQSYAGGVPGSIMDDDDTRAISPSNNLFQQKLEQQRQRTAAKQR
QKRMGSGMMQANDNLRPRTAGSTRPRSANKQWQSSGVNDGTGMVNSGFVS
DNPNSNHVNNENTDEDGIPTEIVDGGIRQSRNSPINNTSTTQIVDSSDDN
GDDDDDIESAELPVVQPNVRAERSASPYRDAAPVDIKQGSDSNEKLQMKN
TSNDIEVGDVNEFILRPAPQGQTIKCRITRDKKGVDRQMFPTYFLHLEKD
DGKKVFLLAGRKRKKSKTSNYLIAVDPIDLSRAGENFVGKLRSNLVGTKF
TCFDGGRSPKKGGVLTDGSNLREELCAIIYDTNVLGFKGPRKMTVVIPGM
GLDHQRVPIQPQNENECLLERHRTKHMENLIALQNKTPVWNDDTQSYVLN
FHGRVTQASVKNFQVVHENDQDYIVMQFGRVADDVFTMDFNYPLCALQAF
SIALSSFDGKLACE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040729XLOC_040729Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064951TCONS_00064951Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000007Tubby_C
IPR018066Tubby_C_CS
IPR025659Tubby_C-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000007Tubby, C-terminalPRINTSPR01573SUPERTUBBYcoord: 401..417
score: 82.62
coord: 271..287
score: 46.52
coord: 383..400
score: 64.65
coord: 287..311
score: 53.82
coord: 322..349
score: 55.68
coord: 421..440
score: 66.14
coord: 442..464
score: 80.04
IPR000007Tubby, C-terminalPFAMPF01167Tubcoord: 217..458
e-value: 1.4E-88
score: 296.5
IPR000007Tubby, C-terminalGENE3D3.20.90.10coord: 210..458
e-value: 2.4E-97
score: 325.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..162
IPR018066Tubby, C-terminal, conserved sitePROSITEPS01200TUB_1coord: 401..414
IPR025659Tubby C-terminal-like domainSUPERFAMILY54518Tubby C-terminal domain-likecoord: 205..464

Blast
[Close]
BLAST of TCONS_00064951-protein vs. Swiss-Prot (Human)
Match: TUB (Tubby protein homolog OS=Homo sapiens GN=TUB PE=1 SV=1)

HSP 1 Score: 429.098 bits (1102), Expect = 5.587e-147
Identity = 193/262 (73.66%), Postives = 230/262 (87.79%), Query Frame = 0 
Query:  204 DIEVGDVNEFILRPAPQGQTIKCRITRDKKGVDRQMFPTYFLHLEKDDGKKVFLLAGRKRKKSKTSNYLIAVDPIDLSRAGENFVGKLRSNLVGTKFTCFDGGRSPKKGGVLT-DGSNLREELCAIIYDTNVLGFKGPRKMTVVIPGMGLDHQRVPIQPQNENECLLERHRTKHMENLIALQNKTPVWNDDTQSYVLNFHGRVTQASVKNFQVVHENDQDYIVMQFGRVADDVFTMDFNYPLCALQAFSIALSSFDGKLACE 464
            D+EV D+ EF LRPAPQG TIKCRITRDKKG+DR M+PTYFLHL+++DGKKVFLLAGRKRKKSKTSNYLI+VDP DLSR G++++GKLRSNL+GTKFT +D G +P+K    T +   LR+EL A+ Y+TNVLGFKGPRKM+V++PGM + H+RV I+P+NE+E LL R + K+ E++I LQNKTPVWNDDTQSYVLNFHGRVTQASVKNFQ++H ND DYIVMQFGRVA+DVFTMD+NYPLCALQAF+IALSSFD KLACE
Sbjct:  245 DVEVQDLEEFALRPAPQGITIKCRITRDKKGMDRGMYPTYFLHLDREDGKKVFLLAGRKRKKSKTSNYLISVDPTDLSRGGDSYIGKLRSNLMGTKFTVYDNGVNPQKASSSTLESGTLRQELAAVCYETNVLGFKGPRKMSVIVPGMNMVHERVSIRPRNEHETLLARWQNKNTESIIELQNKTPVWNDDTQSYVLNFHGRVTQASVKNFQIIHGNDPDYIVMQFGRVAEDVFTMDYNYPLCALQAFAIALSSFDSKLACE 506
The following BLAST results are available for this feature:
BLAST of TCONS_00064951-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TUB5.587e-14773.66Tubby protein homolog OS=Homo sapiens GN=TUB PE=1 ... [more]
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