TCONS_00065043-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00065043-protein
Unique Name	TCONS_00065043-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	515

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00065043-protein ID=TCONS_00065043-protein|Name=TCONS_00065043-protein|organism=Clytia hemisphaerica|type=polypeptide|length=515bp
KVRYSSDKMRTFYGLLAGSITLIVSLSLCTKVESTRPLFTLGGQLENGAE
GLDYDKVHLHNQHERVRRSANPEEERIFLTFKAFDREFNIELHHDPWKIL
DFKSSGNNGPDISKYLYSGWLKDESNTRVSGSVRNGILQATIYINDKPTF
KIESSQRYPEIPSEKYHSLIYHYSDVKKLKSSNFGKMAGAAQIPMDDAME
VPESLEQAKEHKHSRQRRSTPFDPARKECLVLMVADYTYVAAHNYDIEEA
YLKMATTFDAAKQIYEQSDFDGDGNADGITLRIGGFNRTKNSTECVGDEC
RYNSTLGINELLTVFTTNDHGDYCLASLFVDRNFAPAATIGLAWVGVICE
TYKRYRLDDGVTLSDRTYNTNWVTINSRGTPLTDAVVEIVTAHEFGHNYG
SDHDNSTCQPSDVSPNGYYIMNPTAPQNGNLPNERQFSRCSLNEMWAKIQ
TQGGCFKAVKLNESSSSAIVPQPSSMPLPSSSHISPSPSQLAPPMSTSMS
ASPQSSMPPPQSSMP

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040778	XLOC_040778	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00065043	TCONS_00065043	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024079	MetalloPept_cat_dom
IPR001590	Peptidase_M12B

Vocabulary: **Molecular Function**
Term	Definition
GO:0008237	metallopeptidase activity
GO:0004222	metalloendopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008237	metallopeptidase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13688	Reprolysin_5	coord: 226..438 e-value: 2.2E-25 score: 89.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 468..515
None	No IPR available	SUPERFAMILY	55486	Metalloproteases ("zincins"), catalytic domain	coord: 227..453
IPR024079	Metallopeptidase, catalytic domain	GENE3D	3.40.390.10		coord: 222..459 e-value: 5.3E-35 score: 120.6
IPR001590	Peptidase M12B, ADAM/reprolysin	PROSITE	PS50215	ADAM_MEPRO	coord: 227..445 score: 13.286

Blast

[Close]

BLAST of TCONS_00065043-protein vs. Swiss-Prot (Human)
Match: ADA10 (Disintegrin and metalloproteinase domain-containing protein 10 OS=Homo sapiens GN=ADAM10 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.295e-37
Identity = 125/448 (27.90%), Postives = 208/448 (46.43%), Query Frame = 0

Query:   41 LGGQLEN-------GAEGLDYDKVHLHNQHERVRRSANPEEERIFLTFKAFDREFNIELHHDPW------------KILDFKSSGNNGPDISKYLYSGWLKDESNTRVSGSVRNGILQATIYINDKPTFKIESSQRYPEIPSEKYHSLIYHYSDVKK----------LKSSNFGKMAGAAQIPMDDAMEVPESLEQAKEHKHSRQRRSTPFDPARKECLVLMVADYTYVAAHNYDIEEAYL-KMATTFDAAKQIYEQSDFDGDGNADGITLRIGGFNRTKNSTECVGDECRYNSTLGINELLTVFTTNDHGDYCLASLFVDRNFAPAATIGLAWVGV-------ICETYKRYRLDDGVTLSDRTYNTNWVTINSRGTPLTDAVVEIVTAHEFGHNYGSDHDNST-CQPSDV-----SPNGYYIMNPTAPQNGNLPNERQFSRCSLNEM 445
            +GGQ  N         EGL Y+   LH +H+R +R+ + E++ + L F A  R FN+ +  D              K+LD+ +S         ++Y+G +  E  +   GSV +G  +  I      TF +E ++RY +  +  +HS+IYH  D+               S F +M       +++  ++P+    A   +  R++R+T  +  +  C + +  D+ +     Y   EA + ++++   A   IY+ +DF G  N   +  RI   N T +  +   +  R+   +G+ + L + +  +H DYCLA +F DR+F     +GLAWVG        ICE  K Y   DG     ++ NT  +T+ + G+ +   V  I  AHE GHN+GS HD+ T C P +        NG YIM   A  +G+  N  +FS CS+  +
Sbjct:   17 MGGQYGNPLNKYIRHYEGLSYNVDSLHQKHQRAKRAVSHEDQFLRLDFHAHGRHFNLRMKRDTSLFSDEFKVETSNKVLDYDTS---------HIYTGHIYGEEGSFSHGSVIDGRFEGFIQTRGG-TFYVEPAERYIKDRTLPFHSVIYHEDDINYPHKYGPQGGCADHSVFERMRKYQMTGVEEVTQIPQEEHAANGPELLRKKRTTSAE--KNTCQLYIQTDHLFFKY--YGTREAVIAQISSHVKAIDTIYQTTDFSGIRNISFMVKRIR-INTTADEKD-PTNPFRF-PNIGVEKFLELNSEQNHDDYCLAYVFTDRDFDDG-VLGLAWVGAPSGSSGGICEKSKLY--SDG---KKKSLNTGIITVQNYGSHVPPKVSHITFAHEVGHNFGSPHDSGTECTPGESKNLGQKENGNYIMYARAT-SGDKLNNNKFSLCSIRNI 440

The following BLAST results are available for this feature:

BLAST of TCONS_00065043-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00065043-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ADA10	2.295e-37	27.90	Disintegrin and metalloproteinase domain-containin...	[more]

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TCONS_00065043-protein (polypeptide) - C. hemisphaerica