TCONS_00065120-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065120-protein
Unique NameTCONS_00065120-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length198

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065120-protein ID=TCONS_00065120-protein|Name=TCONS_00065120-protein|organism=Clytia hemisphaerica|type=polypeptide|length=198bp
PVGYPDSVCPEYIEFQFWDTLQEACGYFRAILKNQAWLTVLGVGDAQASV
VSAVAMTMMVDYSGMVSGLYFAGSQKRVKKFAANQKYWTMVHEVLTLISA
VLTLLSSVFPKHLILILVIGRVIATAAGVMNGSCQSNLVTHIARNNNFAD
CKAKEGNQNRMLKLLLIGIGYKFLIFVNKTGERVLLAFIVLSMGKLFC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040826XLOC_040826Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065120TCONS_00065120Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006968RUS_fam
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006968Root UVB sensitive familyPFAMPF04884DUF647coord: 1..198
e-value: 3.7E-39
score: 134.7

Blast
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BLAST of TCONS_00065120-protein vs. Swiss-Prot (Human)
Match: RUS1 (RUS1 family protein C16orf58 OS=Homo sapiens GN=C16orf58 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.350e-24
Identity = 51/164 (31.10%), Postives = 87/164 (53.05%), Query Frame = 0 
Query:    1 PVGYPDSVCPEYIEFQFWDTLQEACGYFRAILKNQAWLTVLGVGDAQASVVSAVAMTMMVDYSGMVSGLYFAGSQKRVKKFAANQKYWTMVHEVLTLISAVLTLLSSVFPKHLILILVIGRVIATAAGVMNGSCQSNLVTHIARNNNFADCKAKEGNQNRMLKL 164
            P G+PDSV P+Y+ +Q WD++Q         L  QA L  +GVG+A+A+V +A A  ++ D +GM+  + FA    +  K   N K W +  ++L  ++  L +++ V+P    + +    +      V  G+ ++ L  H AR NN AD  AK+ +Q  ++ L
Sbjct:   79 PQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDSTGMLGRIVFA--WWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAKCIVSVAGGATRAALTVHQARRNNMADVSAKDSSQETLVNL 240
The following BLAST results are available for this feature:
BLAST of TCONS_00065120-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RUS14.350e-2431.10RUS1 family protein C16orf58 OS=Homo sapiens GN=C1... [more]
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