TCONS_00065263-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065263-protein
Unique NameTCONS_00065263-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1062

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065263-protein ID=TCONS_00065263-protein|Name=TCONS_00065263-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1062bp
MVLLVFLIDTSASMNQRTCLGTSYLDLAKGAVESFIKIRARDPVNAKGDR
YMLVTYDENSKSVKAGWKGVNLQMFMTELKNLDGFNLSDVGRALKESFDL
LNINRLHMGLDNYGMGRNPFYLEPAIILLLTDGCAPMDPNGMIKEISIPT
HDLLPGAELTNELYRWDQRLFTLQMKIPGFAQPLNDKHLANTPEDVPLST
LCDLTGGKLYNIGGYKQLLQSMESIAQKIITPGVVLNFAMHGPDDMIQED
VQDHMKCDENDYLGINELKDGHHINGKISRTGVSDNQLTSLFTDQSNFYN
QQHGGMNGFVNGQGILPTPPSINNKNFIKNPNIINGDIEMNQPLKTEGLS
TSENLIPETPIRGGEEPENVFSPSSVAQTTAWHNQHRLIYVRKGKGSVCH
WPIPESFWPDPAATRIPARNSHPIVKFVCKPVDAVVGNLSYNLPFDKYEL
EPSPLTQNILERRMANTAWQTFISGSSPDSEIGYPFGYLKASTNFQTVNL
FVLPYNYPVILPLLDDLFQIHKCKPSVSWKQCFQEYLQTVPSYYYDPLRH
ALNSMKAPTNLIPDHMAGALSYSVSTYLKKLKHESKARADRYLQQKKDQD
NVPPAEIPRVPQLNDGKLRDFKELLIHKSSSRRKGKSSKTNSGDSKPFDK
RKIPKVLAQKLTIETFRNPFVIPYGDIIDHVNRMRLQFFHMSATSSATSD
KTLADEEQRHDVAITAMGNFQDHLQQNKSLREVDPSQIRVHTFGNPFKLK
QQEQANQAVIAVDEADVNENMPLGANANQRKRSGDIMASLQKGKRKRSET
PPPSRKPIGRPNVPPPKPILSNNTKEETEKLLRLLPDHKGVLKDVTGSLD
KNSLENNDKDKHSSNVTVSKQLRKLQQIHRNKKGVAVDLTNDNNTDDIEH
LDSHSPILSILRTSLEESDERDNDEVSQINERSVIYDDDNSNDSTSTTRT
TPSVAATPLSAILSPLLMEDMFRNKSNEQLKTIYQELHTRKVVQIRQSIW
QAIRGRKKFSVIEDMVKRLNVSMESKYLFVMNLIYEAERFQHLELENDLK
TLLREIQANRND
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040921XLOC_040921Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065263TCONS_00065263Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1042..1062
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 848..867
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 629..651
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 593..613
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 773..822
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 913..953
NoneNo IPR availableCDDcd00198vWFAcoord: 4..147
e-value: 1.51149E-10
score: 59.5018
IPR002035von Willebrand factor, type APFAMPF13519VWA_2coord: 4..133
e-value: 3.9E-15
score: 56.3
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 2..231
e-value: 9.0E-14
score: 51.3
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 3..133
score: 8.95
IPR002035von Willebrand factor, type ASUPERFAMILY53300vWA-likecoord: 4..229

Blast
BLAST of TCONS_00065263-protein vs. Swiss-Prot (Human)
Match: INT6 (Integrator complex subunit 6 OS=Homo sapiens GN=INTS6 PE=1 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 3.928e-90
Identity = 244/697 (35.01%), Postives = 362/697 (51.94%), Query Frame = 0
Query:  382 WHNQHRLIYVR---KGKGSVCHWPIPESFWPDPAATRIPARNSHPIVKFVCKPVDAVVGNLSYNLPFDKYELEPSPLTQNILERRMANTAWQTFISGSSPDSEIGYPFGYLKASTNFQTVNLFVLPYNYPVILPLLDDLFQIHKCKPSVSWKQCFQEYLQTVPSYYYDPLRHALNSMKAPTNLIPDHMAGALSYSVSTYLKKLKHESKARADRYLQQ--KKDQDNVPPAEIPRVPQLNDGKLRDFKELLIHKSSSRRKGKSSKTNSGDSKPFDKRKIPKVLAQKLTIETFRNPFVIPYGDIIDHVNRMRLQFFHMSATSSATSDKTLADEEQRHDVAITAMGNFQDHLQQNKS-LREVDPSQI-RVHTFGNPFKLKQQEQANQAVIAVDEADVNENMPLGANANQRKRSGDIMASLQKGKRKRSETPPPSRKPIGRPNVP----------PPKPILSNNTKEETEKLLRLLPDHKGVLKDVTGSLDKNSLENNDKDKHSSNVTVSKQLRKLQQIHRNKKGVAVDLTNDNNTDDIEHLDSHSPILSILRTSLEESDERDNDEVSQINERSVIYDDDNSNDSTSTTRTTPSVAATPLSAILSPLLMEDMFRNKSNEQLKTIYQELHTRKVVQIRQSIWQAIRGRKKFSVIEDMVKRLNVSMESKYLFVMNLIYEAERFQHLELENDLKTLLREIQANRN 1061
            WH+ H+LIYVR   K    + HWP+PESFWPD  +  +P R SHP+VKF C   + +V +    LPFDKYELEPSPLTQ ILER+   T WQ ++S S+  SE+G+PFGYLKAST    VNLFV+PYNYPV+LPLLDDLF++HK KP++ W+Q F+ YL+T+P YY  PL+ A+  M AP NLI D M   LSYSV +YLKKL  ++K  +DR +    KK           R   L+    +DF++LL    S     +    N  +   F       +L + L  +TFRN + IP  +++DH+ RMR     + +T      +   DE+Q H V I  MGN+Q++L+Q  S LRE+DP Q  R+HTFGNPFKL ++       + +DEAD     P     N+ KR G+   ++Q   ++R    P  R   GR   P          PP P     T +    L++ LP HK + +    S+  + +EN+  D+ SS++T +    +      +   +    TN       +HL ++   +     + EE   RD ++ ++ N                       + A+ L+        + +   +S+E++ T   EL  + + +IR+       GR K+  I  ++K +  S++++ +F+ N+I EA RF+   L   L+  L EI    N
Sbjct:  261 WHSCHKLIYVRPNPKTGVPIGHWPVPESFWPDQNSPTLPPRTSHPVVKFSCTDCEPMVID---KLPFDKYELEPSPLTQFILERKSPQTCWQVYVSNSAKYSELGHPFGYLKASTALNCVNLFVMPYNYPVLLPLLDDLFKVHKAKPTLKWRQSFESYLKTMPPYYLGPLKKAVRMMGAP-NLIADSMEYGLSYSVISYLKKLSQQAKIESDRVIGSVGKKVVQETGIKVRSRSHGLSMAYRKDFQQLL-QGISEDVPHRLLDLNMKEYTGFQV----ALLNKDLKPQTFRNAYDIPRRNLLDHLTRMRSNL--LKSTRRFLKGQ---DEDQVHSVPIAQMGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKG------MMIDEADEFVAGP----QNKHKRPGE--PNMQGIPKRRRCMSPLLR---GRQQNPVVNNHIGGKGPPAP-----TTQAQPDLIKPLPLHK-ISETTNDSIIHDVVENHVADQLSSDITPNAMDTEFSA--SSPASLLERPTNHMEALGHDHLGTNDLTVGGFLENHEEP--RDKEQCAEEN-----------------------IPASSLNK------GKKLMHCRSHEEVNT---ELKAQIMKEIRKP------GR-KYERIFTLLKHVQGSLQTRLIFLQNVIKEASRFKKRMLIEQLENFLDEIHRRAN 879          

HSP 2 Score: 259.61 bits (662), Expect = 7.595e-73
Identity = 130/253 (51.38%), Postives = 181/253 (71.54%), Query Frame = 0
Query:    1 MVLLVFLIDTSASMNQRTCLGTSYLDLAKGAVESFIKIRARDPVNAKGDRYMLVTYDENSKSVKAGWKGVNLQMFMTELKNLDGFNLSDVGRALKESFDLLNINRLHMGLDNYGMGRNPFYLEPAIILLLTDGCAPMDPNGMIKEISIPTHDLLPGAELTNELYRWDQRLFTLQMKIPGFAQPLNDKHLANTP-EDVPLSTLCDLTGGKLYNIGGYKQLLQSMESIAQKIITPGVVLNFAMHGPDDMIQEDVQ 252
            M +L+FLIDTSASMNQR+ LGT+YLD AKGAVE+F+K+RARDP  ++GDRYMLVT++E   ++KAGWK  N   FM ELKNL    L+ +G++L+ +FDLLN+NRL  G+DNYG GRNPF+LEPAII+ +TDG      +G+  E+ +P +  LPG+ELT E +RWDQRLF L +++PG    +  + L   P +D  ++ +C++TGG+ Y++   + L Q +ES+ QK+ + GVV+NF   GPD    ED Q
Sbjct:    1 MPILLFLIDTSASMNQRSHLGTTYLDTAKGAVETFMKLRARDPA-SRGDRYMLVTFEEPPYAIKAGWKE-NHATFMNELKNLQAEGLTTLGQSLRTAFDLLNLNRLVTGIDNYGQGRNPFFLEPAIIITITDGSKLTTTSGVQDELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPG-TMSVESEQLTGVPLDDSAITPMCEVTGGRSYSVCSPRMLNQCLESLVQKVQS-GVVINFEKAGPDPSPVEDGQ 249          
The following BLAST results are available for this feature:
BLAST of TCONS_00065263-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
INT63.928e-9035.01Integrator complex subunit 6 OS=Homo sapiens GN=IN... [more]
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