TCONS_00065314-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065314-protein
Unique NameTCONS_00065314-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length415

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065314-protein ID=TCONS_00065314-protein|Name=TCONS_00065314-protein|organism=Clytia hemisphaerica|type=polypeptide|length=415bp
MKRQEKPWITENILKKSQYKDFLYGKFMKTKCTEVEREYQVARQDIKKET
RKSQFLYMRNKFLSTGKNIKKFWENINAFFGRKKTSKYPNTMTYETKNIS
GNFNIAQAFNNHYSEVAPNLIKKLPKNSDSNVSKSXFNNHYSEVAPNLIK
KLPKNSDSNVSKSTPENNSSFLFQKTTRYEILTLLNKLDNKKSKDLYDFP
IDIIKATADLIAEPLSHIINHSIKGGVFPETLKHAKVLPLFKKGPRDDIK
NYRPISVLPLFDKVFEQVMHKRLSKFLDKNEYLDKNQHGFQKGKSTSSAV
LQLSRMIKKSLKAKEYGCAIFLDLAKAFDTVNHPILLQKLQRSGVRGPIL
KWFHSYLSNRLQTVTINQTKSDPKHISHGVPQGSVLGPLLFLIYINDISL
NTTLSSILFADDTCL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040951XLOC_040951Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065314TCONS_00065314Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..52
NoneNo IPR availableGENE3D3.30.70.270coord: 39..415
e-value: 1.2E-17
score: 63.6
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 234..415
e-value: 1.83593E-42
score: 148.979
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 159..414
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 244..414
e-value: 4.4E-39
score: 134.2
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 221..415
score: 17.957

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065314-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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