TCONS_00065400-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065400-protein
Unique NameTCONS_00065400-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1704

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065400-protein ID=TCONS_00065400-protein|Name=TCONS_00065400-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1704bp
MSDEESSEKETNKMDDEEPPMKVEDESEIDKDNKTECSTEDDGELKIDDK
PEEMSADESKTDINTSQASDCDPDTDSQTIEDIDQSDIINNENTELLDKS
RSSDTKPKWKLKIRMNQGSPEKSKEWKVVEDEKPQVENTDNNDSCNTDQE
MIDVCTPSETPKMVADVPLTSAPGKRKIKKKSLETLTTPAKKPKGGLRSD
CPPFCKTNCTLEHHPLLVGARKMIENDSGTTLVFLDLINSYYGGSNGNLQ
ASDSIFDPGKNTNFPLLHYIALMGKCAGCFAMVDAGHEPENVVTEDGDTV
LHVMVKEMYVFNCTHGHMDILLKKFNLLLKEFKNCLIVTNKSWQNPLHLC
ADLISQTAFQCAQPDRGKPPFRLYQFQKNMLTSMLDQFKNDGLESSMLNM
TDNKQNTFSHYLARDRASHDLLDIAKEMGADLTVCNNENMNVEQVMDNAP
PPPPEDILEMAAFSAKGRKYKNSHQKPIITTGATKSPSMTTKSPSMTKSK
RTVKPSAKAKAVEEDLMYETFSRDIIKIEKKKEKRTVQKPVVDLTETHDL
PTIPTSQIISGLSNIKGKVRVKVTPTRKEKEEEKISKKLAKLQAKENSKN
GDSPKVIVIGDAPSSGSPSPDSSLPNSLKPPIFKVILPKAPLTNSSASNN
TLPNGPAAMIAKVKPTIITKQVNPPIGSDPKPMQNKLEISPMLPNNIRPP
TTIVVNQALSQKVGPFSVAQPQSSINQPQRSPILIKTAEGQVLQLRNISP
EVIQANQATTINQRAPLQCNQAKPLLNGQQVNQNRGVQMMGMQMRQLPVH
IGSLINGKPQIRHTNQPNIPPINVNINSQQHKIVPVNVNGQWALRYPTPM
TSPLGQMQRGPLSSNHYHQPLQSFIQNRGFPPANTHPRNMFPSPSMVPNQ
PLRMVQAQRLQPPIINPPTIPLQGNTNQSIVSPLPLQTSKQHEVINTKRG
RKLEASIKNLQNISMEIISRNFGSNDKAQGTPKTSPDTKPPPPTSQPSAA
PQPQEVAPPVYIIDTDDEQHILTEEMTKKKTSPSPTPSTDGNKVNDSEEV
NHKEHIEKRCNYQVELPFNTCQHFEQFLIINRLKYAKIECQGDHQEPGTS
SNPFLPENDSNRNQFVENTKDLAVELLEWFSLNKHLCKEHFARLILQENR
RHLEDLLSMVDLQEHLSTREVEDMIKIKHFLRNPELKRALSCPCGDSFDD
TEIAHQHHHQQNHHNHHHSNNHHYQEPPQQPTPRSPLIHQHRKAFWEDNL
ISQREVHQIAEALKAWLHRNHWVSQGYFATHYLNRSQGTISHLLRWATAP
TSRQGEEVWHRIKHFLENKELQDSFSLKAKKYKASQTSSSSSSYQQPISN
SMTHQEPLPSSSSQDPTTSSTIPSQAQSAEPDPQPEGVAQSAPTPTLVKT
TVSSTADSHLQVNLEPLAQPSSSIPSHDIHIGAFDQEDIHQLADHLQQWL
YRNPIISQARFSKHILQRSQGTLSSLLKMRCMPISRAGYEVWHKIRDFLN
DTDKQETLLRNYGWVGSFKEVKAENGDENRAPAEEAVLDASERREDRKRP
HPDNRIPVKSEDNHSSLHPPPDHPPHVQFPSISRIDDPSAFGPMSRPSQR
GPIPDVPTMSVSPYKVKRLGEFDQDTVTRLADQLKDWLDNQTRVSQGLFA
QRVLARSQGTLSLLLTRKTAPISTSGEEVWKKIRDFLHDERKQIELIHFA
NQQN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040991XLOC_040991Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065400TCONS_00065400Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003350CUT_dom
IPR020683Ankyrin_rpt-contain_dom
IPR010982Lambda_DNA-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 578..598
NoneNo IPR availableGENE3D1.10.260.40coord: 1252..1336
e-value: 4.0E-9
score: 36.1
coord: 1439..1511
e-value: 2.2E-7
score: 30.5
coord: 1625..1703
e-value: 9.1E-9
score: 34.9
NoneNo IPR availableGENE3D1.10.260.40coord: 1118..1191
e-value: 0.017
score: 14.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1025..1052
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 479..506
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1336..1393
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 971..1004
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 592..627
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1092..1112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1205..1236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1525..1609
IPR003350CUT domainSMARTSM01109CUT_2coord: 1242..1331
e-value: 0.0013
score: 23.6
coord: 1429..1510
e-value: 0.009
score: 16.4
coord: 1620..1702
e-value: 0.0017
score: 22.7
IPR003350CUT domainPFAMPF02376CUTcoord: 1628..1695
e-value: 6.5E-9
score: 35.7
coord: 1436..1506
e-value: 1.5E-9
score: 37.8
coord: 1257..1321
e-value: 3.2E-9
score: 36.7
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 208..468
e-value: 6.2E-8
score: 31.6
IPR010982Lambda repressor-like, DNA-binding domainSUPERFAMILY47413lambda repressor-like DNA-binding domainscoord: 1256..1333
IPR010982Lambda repressor-like, DNA-binding domainSUPERFAMILY47413lambda repressor-like DNA-binding domainscoord: 1440..1509
IPR010982Lambda repressor-like, DNA-binding domainSUPERFAMILY47413lambda repressor-like DNA-binding domainscoord: 1629..1700

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065400-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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