TCONS_00066016-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066016-protein
Unique NameTCONS_00066016-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length448

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066016-protein ID=TCONS_00066016-protein|Name=TCONS_00066016-protein|organism=Clytia hemisphaerica|type=polypeptide|length=448bp
PCPPKCICTSKVVNCEDKGLTNANLTTIVSQMSNETEVLYLGRNELTYFS
LRVFENLTALMELELDNNKLKRVPDNRFGYVKRLKVLNMEYNSLTALNGD
DFKGYGWLHVLFLSNNNLVSLTKNDLKYLVHLREIHLDNNHIHGILDDTF
HFNRDLHQISIVNNIVTRLVPGLFDHLTYLEEVFLYGNQLTFIPDFIISM
NQRLKRIEFSHNRISEISEYAFANMSNIGTVDIDLSYNTISTFQVSSFAF
SGELYVAIDVNLWHCSCPFLAALQKVSHQDHVIFEGGICQSPSKLIDKAI
DVTSLSPNQVGCNLCDIADCMNGADCTVNVEKKTFQCYCKYGFEGRYCEK
RKSVTEVCGNHTCPESQVCVPVDYRSYVCMCLNENGAKMMCDGKRDSEQP
SVLVWVISGICIVVIVTAVVVFVLFLRRRRNKHQRNILIDENDDNEDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041339XLOC_041339Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066016TCONS_00066016Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR000742EGF-like_dom
IPR001611Leu-rich_rpt
IPR032675L_dom-like
IPR013032EGF-like_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 81..104
e-value: 24.0
score: 10.2
coord: 202..224
e-value: 46.0
score: 7.9
coord: 177..200
e-value: 18.0
score: 11.2
coord: 32..56
e-value: 390.0
score: 0.2
coord: 129..152
e-value: 0.42
score: 19.7
coord: 57..80
e-value: 3.3
score: 16.7
IPR000742EGF-like domainSMARTSM00181egf_5coord: 357..392
e-value: 230.0
score: 0.4
coord: 314..349
e-value: 1.7E-4
score: 30.9
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 313..349
score: 14.06
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 131..190
e-value: 7.1E-8
score: 32.0
coord: 59..118
e-value: 3.4E-11
score: 42.6
NoneNo IPR availableGENE3D2.10.25.10coord: 313..353
e-value: 7.5E-6
score: 25.4
NoneNo IPR availableGENE3D1.20.5.100coord: 394..435
e-value: 0.0013
score: 17.8
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 309..350
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 1..111
e-value: 1.2E-19
score: 69.7
coord: 112..312
e-value: 2.7E-28
score: 98.1
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 1..275
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 337..348
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 337..348

Blast
[Close]
BLAST of TCONS_00066016-protein vs. Swiss-Prot (Human)
Match: ALS (Insulin-like growth factor-binding protein complex acid labile subunit OS=Homo sapiens GN=IGFALS PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.475e-22
Identity = 85/292 (29.11%), Postives = 134/292 (45.89%), Query Frame = 0 
Query:   37 EVLYLGRNELTYFSLRVFENLTALMELELDNNKLKRVPDNRFGYVKRLKVLNMEYNSLTALNGDDFKGYGWLHVLFLSNNNLVSLTKNDLKYLVHLREIHLDNNHIHGILDDTFHFNRDLHQISIVNNIVTRLVPGLFDHLTYLEEVFLYGNQLTFIPDFIISMNQRLKRIEFSHNRISEISEYAFANMSNIGTVDIDLSYNTISTFQVSSFAFSGELYVAIDVNLWHCSCPFLA----ALQKVSHQD---HVIFEGGICQSPSKLIDKAIDVTSLSPNQ-VGCNLCDIADC 320
            E L LG N +   + R FE L  L  L LD+N+L+ V    F  +  + V+N+  N L  L    F+G G LH L L  + L  +  +    L  LR + L +N + GI + +     +L ++ + +N +T L   LF  L  LE + L  N+L  +P   +   QR   ++ SHNR+  +     A +  +    + L  N++ TF        G   + ++ N W C CP  A    ALQ  S        I EG  CQ P+   +   ++T  SP + VG +L D+++ 
Sbjct:  317 EELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRY--LSLRNNSLRTFTPQP---PGLERLWLEGNPWDCGCPLKALRDFALQNPSAVPRFVQAICEGDDCQPPAYTYN---NITCASPPEVVGLDLRDLSEA 600

HSP 2 Score: 87.0409 bits (214), Expect = 3.064e-18
Identity = 69/244 (28.28%), Postives = 111/244 (45.49%), Query Frame = 0 
Query:   39 LYLGRNELTYFSLRVFENLTALMELELDNNKLKRVPDNRFGYVKRLKVLNMEYNSLTALNGDDFKGYGWLHVLFLSNNNLVSLTKNDLKYLVHLREIHLDNNHIHGILDDTFHFNRDLHQISIVNNIVTRLVPGLFDHLTYLEEVFLYGNQLTFI-----P------------DFIISMNQR-------LKRIEFSHNRISEISEYAFANMSNIGTVDIDLSYNTISTFQVSSFAFSGELYVAI 258
            L+L RN+L   +L  F +  AL  L L NN+L R+ D  F  +  L  LN+ +NSL  L    F+G G L  L L+ N L  L       L  LRE+ L  N +  I  + F     L ++ +  N++  + PG F  L  L  + L  N++  +     P            + I S+  R       L+ ++  HNRI +++E +F  +  +  + +D  +N +   +V + AF G   VA+
Sbjct:  127 LHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLD--HNQLQ--EVKAGAFLGLTNVAV 366
The following BLAST results are available for this feature:
BLAST of TCONS_00066016-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ALS2.475e-2229.11Insulin-like growth factor-binding protein complex... [more]
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