TCONS_00066021-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066021-protein
Unique NameTCONS_00066021-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length372

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066021-protein ID=TCONS_00066021-protein|Name=TCONS_00066021-protein|organism=Clytia hemisphaerica|type=polypeptide|length=372bp
MAQNEELRNTIKQILVEEQKKEGSSISKLKQRLERKRTYDQTTFSKRGHE
EQFKHTVEVIESLDDAIEALETGENESALTFIKQEYWEFLQSNETCIAGK
ISKFSKFWEDELKTPFPLMDTVKNGYKLPFECTPPPFYAKNNASSLKNKD
FVETSINELLIEGRIKQVKEVPFCVNPLTVVEKNSKLRLVLDLRHINSYI
QPPKFKYEDLKTAAEILDQNDFMITFDLTSGYHHVPINNNFQKFLGFAWD
YNGETKYFIFRVLPFGLNIACWIFTKLMRQLVKRWRRQGIKCAMYLDDGI
LGCSSFSKMTENRIVILRDLWSAGLTLNLKKSSLKPERQKIWLGFIVDTE
NMIFEVPEEKGGSFRYYFNLKI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041344XLOC_041344Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066021TCONS_00066021Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 196..346
e-value: 3.3E-17
score: 62.6
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 162..347
score: 16.522
NoneNo IPR availableGENE3D3.10.10.10coord: 129..264
e-value: 2.2E-18
score: 65.9
NoneNo IPR availableGENE3D3.30.70.270coord: 265..352
e-value: 2.2E-15
score: 56.0
NoneNo IPR availableCDDcd03714RT_DIRS1coord: 226..347
e-value: 1.9267E-28
score: 106.659
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 134..351

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066021-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top