TCONS_00066021 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066021
Unique NameTCONS_00066021
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5133

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066021 ID=TCONS_00066021|Name=TCONS_00066021|organism=Clytia hemisphaerica|type=transcript|length=5133bp
CTTCTCCACTATTTCTCCTCAAAGCTTAAGAATAATACATAGAAAGTAGA
AATAATAAGAGACatgaatttctttgtttatTGGATACATCTTGCAATGA
AAAACATGTAGTTgagatatttttataaattcgtAAATTTTAGGTTATAA
GGTAAAAATGAAATGCTAAAGCAATCATTTGTTGTATCTTTTGAACATCA
CGCACCATAATTTGATAACTAGAACGAATTTGAAATATACTATCCATTGA
ATGTACGTTCTTTCCAATAAGCATGCAAAATGTTAGAAGAATAACAGGAT
AAATGTAATAGATCCTTCTGCAATCGTGCCAACAGCAATGTGTGAAACAA
TTATCAGGTGAAAAATTGAATAGTTTACATGTGAATAGTGCCGCAAGACC
GGtcagaataaaaatatcgataaaattAATATTATTCATTATTACAATAA
AAAAGGGATATATTAGTACTAACGGTGACTAAGCAGGTAGCGCAAAACCC
CCACTGGCTGTTTCTGGAGGAAACATTATCTCCGAACCGAGTGCATCAGT
CACCCCGACCTCCGGAGTTTAAAGGTCCTCCCTttgtaaataataaaaaa
gctATACACAAAGTACGTTAAAAACAGCGTTGTTCCGTAATCTGGATTCA
TTAAAGATCGCGTGTAACCGTAAAAGTGGCCCACTTCGCTGCTTGTAATG
AGGATAGCCGTGCATGAACCATATCGAACAATGTCGTTGAATCCCGTTGT
TTTCTCCAATGCTGATGTCGATTCGTCTCGTTTTTACAtgaaagcaaaaa
aagaaatagaagtgATTAGCTTAACTTAACTACAAACTTTTTGCAAGAGC
GaggattttgaaatgaaaagatGAGACATTTAAACACGCATTTTTGACGC
ATGCGCGCAGCTTGTCCCAATCTGCGCAAAGATCATCAAGCAGCTTTGTG
TGCGAAACCGTTGAGAAACTCGTTTCCCGTCTTTCTTCGATCGCCGAGAA
ACACGCTTCTCCACTATTTCTCCTCAAAGCTTAAGAATAATACATAGAAA
GTAGAAATAATAAGAGACatgaatttctttgtttatTGGATACATCTTGC
AATGAAAAACACGaggagaagaaaagaaaaggtaTGGATGCAAAAACTCT
TCGATTATATTCCTAATCGGTTGGAAACTTTGAACCTGTTAGCATGACTG
TCCTTGATGTACTTATCTCTGCTTGTATTAGAGGACCAACGACCGTGCTT
CGAAATCATACGGTCCGAGACACCATTGTTCGCAGCCTCTGAGGCGCCTC
CAGAACGTAAAGAATGTAGACCATACTGTCTTGTGTCTGTAATAATATTT
GACAAATGCTCCTTAAAAGATTCCCTTGCAGTCGTGTAGGATATTTGATA
ATGACCATGGGCCGAATGACCTACCTTACACTTGAAAAGcctacaaaata
gaaaatctttaGGTTTCTTAAGCTTTGTGAGATGAAGATATTTTCGAAGC
CAGTAGACAGAACAGTAAGGTGTCTTTGTCTCGCTAATGAAAACTGTGTC
TCCTTCTCTCAGTTGATCGGTTTTTGAACTTGGTAGGAAGATTTTCACTC
CATCTGTACAAAGAGTAATATCTTTGATCTGGATTTCTAACATTTCGCTT
ATTCTGAAAAATCCGGAAAAACCAAGTACGGTCATCAATATAAATCTCAT
ATCAATTAGGTTGTCCGAAGTGGTGTAACGATCAACAATAACTTTCAAAA
ACTCAGATGTAATAGGCTCTTTTCGATTTCGTTTAGCATCGGGGTTTCTA
TTCGCAATAATGCGTTTCCCACCTTCGAATGCGAGTTTTACCAGAGGGTT
GTCCGTAGGAGAAGAAAAACCAGATGTATGGTGACTCCACCTGATTCCCA
TCATAGCGGTAGTTAGGGCTCCTTCGGTCGCGTCTGAGCAAGTTAAATCA
TTCAAGTAGATTGCCACAAAAAAGGGGTCTGCAGGACAAAAAGACACTTC
TTCaaagtttttggcccaaatctTCCATTTTTCCCACGCAGGTTTGTACT
TTTTCAGAGTTGATTCGGCATAGGCGGCCTCTAAGAGATCGGGGAGATTA
GCTGCTTTTTCCCTTAGCCTCTGATCTTTGATTGCCTCTATCCTTTGCTC
GAGAAGGGGATGCGTAACTTCTTCtgaataaaatgataaaagaaataata
taagaaaaaaactCTCATACCTCTGGAAGTGGCATATGCAACAAAGCAGT
GATACCATGATAATCGTCAATCGATATCTTCCTCACGCAAAAGATATCTT
TAAAAGGTATTGCAACAGAGCATGATACCAAAAACTGATATGAGCAACGA
GGCATTCATATCCACAAATATGCAACATATGTGCATCATAATCTCAAAAC
ACTGATATCTGCAACAGAGCACGATATCCACAAATTGATAATAATGTCGG
TATCCACCAATGTGCAACATATGTGCACCATAATCTCAAAACATTGATAT
CTGCAACAGAGCACGATATCCACAATTGATAACAATGTCGATACCAGCAA
ATATAGCATTGATACCATGCTTCATCGTTTGTTCTCAGTTTTTACAcatg
aaaatgagaaaagaaaTTACAAGATTGCATCATAAAAAACTTGGATCGGA
AAAAGAACAAACATGTTCTTGCCTCTAGTGTCAAGTACAtacacaacaac
aaaaaataaacatttccaaTAATTCATTCAGTAGAGTAACAAAAAACTAT
TAACAGAGACAGTAAGCATCggaaaaagtgtattttattCATCTTCGAAA
GTGATGTACAGTGCTAACGAGTAAAAATTAGCGAAACcatcaaaaataca
agaaatgtcagaattattaataaaataaggGTCTAACACAAGAAATTGCT
TAACAAAAGGCTTGAATTCTTTTCCATTGGAAGTTATCATAGGCCAAAAA
TAGACAGATGGCCATAACGGTATAAAAAGAATACCTTTCCCTTGACAGTT
TTTTAGATGGTTGATTGTTTTTCCGACTAAAGAAATTGGAGGACATAACC
AATTAAGTTCACCTTTTCCCCAATGGCAAGTGAATGCATTCATACCAGAC
GAGGTTGGACAGAATTCTTTGGAATTGAAACGTTTTGACTTTGTATTTAA
ATTATCTGCAAATCGATCTATGGTAATCGATCCGAAATGTGAAATTATGT
ATAGAAAAGTCGCATTGTCGATGGACCAATTATCTGTATCTAtagatttt
gaaataatgtcAGCCGGTTCGTTTTCCTCTCTTGGGATCCATGTAGGAAA
AATAGTAATGTTATTAACAacgcaaatattaaaaatttggaCAGCTAAAT
TCTGGAGGTGTTGTTTTGTACTACCACTTTTAATAATTTTGCATGTGTTG
TCGTTGTCAGTGAACCATTCTATTGTCTTGCCTTTTAACAAATGAATAAT
AGACTGTAAAACATATTTAACTGCAAGAAGCTCGCGATATGTTGAGCTAG
TATTCCTCTCGAGAGCACTAAAACTTCCTTTGGCGATGACGTCACCTAGT
TCTTCTACGGCGTAGCCTCCGTATCCTGTACCGCTAGCATCAGAATAAAC
AACTTTTGTTATTTCCGGTCTTGATTTTATacgaaaagtttttgtttttg
aaagattttgtatCCAAAATTCTAGTTCGTATTTGACATCGTAATTCAAA
AGGTGTCTTCTGTCCCAGGTATTTTTTGATTCGACAAATTTGTACATCTG
TTTAGTAAATAAATACGCTGGAGGCCCGATAGCAATTGCCATTGAAATTA
ACTGACCGGCTATTTTTGAAATAGTTCTGGCAGACGAATATTCAGATTTT
AAGGTTGAAGTAATATCTGAAAGAACCCCCTTTTTCTTCAGGGACttcaa
aaatcatattttcagtGTCCACGATAAAGCCTAGCCAAATCTTTTGCCTT
TCTGGTTTGAGactagatttttttaaatttaacgtTAACCCTGCTGACCA
CAAATCTCGAAGAATAACTATCCGGTTTTCAGTCATTTTACTGAAACTAC
TGCAACCTAAGATTCCATCATCGAGGTACATGGCACATTTAATCCCTTGA
CGGCGCCATCTCTTAACTAGTTGTCGCATTAGTTTTGTAAAAATCCAACA
AGCAATATTCAAACCAAAAGGTAGCACAcgaaaaataaagtattttgtTT
CACCGTTGTAATCCCATGCGAACCcaagaaatttttggaaattgttGTTT
ATTGGTACGTGATGATAGCCACTagttaaatcaaaagttatcatAAAATC
ATTCTGGTCCAGAATTTCGGCTGCAGTTTTTAAATCTTCATATTTGAATT
TTGGAGGTTGTATGTAAGAATTTATATGCCTGAGATCAAGTACAAGACGA
AGTTTAGAATTTTTCTCTACGACAGTCAGGGGGTTAACACAAAAAGGAAC
CTCTTTTACTTGTTTTATACGGCCCTCGATTAGCAGCTCGTTAATTGATG
TTTCGACAAAGTCTTTGTTTTTTAAACTCGACGCAttgttttttgcataa
aaaggGGGAGGAGTGCATTCAAAAGGCAATTTATAGCCATTTTTAACAGT
GTCCATCAGTGGGAAAGGTGTTTTTAGTTCGTCCTcccaaaattttgaga
atttgctTATCTTCCCAGCGATACAAGTTTCGTTTGATTGAAGAAATTCC
CAGTACTCTTGTTTTATGAATGTTAAAGCAGATTCATTTTCTCCGGTTTC
CAGTGCTTCTATGGCATCATCTAGACTTTCGATTACTTCGACTGTGTGTT
TGAATTGTTCTTCATGCCCacgttttgaaaacgttgtCTGGTCGTATGTT
CTTTTTCTTTCGAGTCTTTGCTTCAACTTTGATATGGAAGAGCCTTCCTT
CTTCTGTTCCTCAACCAAAATCTGTTTTATGGTATTTCTTAACTCTTCGT
TTTGAGCCATGTTCTTAACTTAACTACAAACTTTTTGCAAGAGCGaggat
tttgaaatgaaaagatGAGACATTTAAACACGCATTTTTGACGCATGCGC
GCAGCTTGTCCCAATCTGCGCAAAGATCATCAAGCAGCTTTGCGTGCGAA
ACCGTTGAGAAACTCGTTTCCTGTCTTTCTTCG
Run BLAST on NCBI

protein sequence of TCONS_00066021-protein

>TCONS_00066021-protein ID=TCONS_00066021-protein|Name=TCONS_00066021-protein|organism=Clytia hemisphaerica|type=polypeptide|length=372bp
MAQNEELRNTIKQILVEEQKKEGSSISKLKQRLERKRTYDQTTFSKRGHE
EQFKHTVEVIESLDDAIEALETGENESALTFIKQEYWEFLQSNETCIAGK
ISKFSKFWEDELKTPFPLMDTVKNGYKLPFECTPPPFYAKNNASSLKNKD
FVETSINELLIEGRIKQVKEVPFCVNPLTVVEKNSKLRLVLDLRHINSYI
QPPKFKYEDLKTAAEILDQNDFMITFDLTSGYHHVPINNNFQKFLGFAWD
YNGETKYFIFRVLPFGLNIACWIFTKLMRQLVKRWRRQGIKCAMYLDDGI
LGCSSFSKMTENRIVILRDLWSAGLTLNLKKSSLKPERQKIWLGFIVDTE
NMIFEVPEEKGGSFRYYFNLKI
Run BLAST on NCBI

transcript from alignment at scaffold_448:601950..607082

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066021 ID=TCONS_00066021|Name=TCONS_00066021|organism=Clytia hemisphaerica|type=transcript|length=5133bp|location=Sequence derived from alignment at scaffold_448:601950..607082 (Clytia hemisphaerica)
CGAAGAAAGACAGGAAACGAGTTTCTCAACGGTTTCGCACGCAAAGCTGC TTGATGATCTTTGCGCAGATTGGGACAAGCTGCGCGCATGCGTCAAAAAT GCGTGTTTAAATGTCTCatcttttcatttcaaaatcctCGCTCTTGCAAA AAGTTTGTAGTTAAGTTAAGAACATGGCTCAAAACGAAGAGTTAAGAAAT ACCATAAAACAGATTTTGGTTGAGGAACAGAAGAAGGAAGGCTCTTCCAT ATCAAAGTTGAAGCAAAGACTCGAAAGAAAAAGAACATACGACCAGacaa cgttttcaaaacgtGGGCATGAAGAACAATTCAAACACACAGTCGAAGTA ATCGAAAGTCTAGATGATGCCATAGAAGCACTGGAAACCGGAGAAAATGA ATCTGCTTTAACATTCATAAAACAAGAGTACTGGGAATTTCTTCAATCAA ACGAAACTTGTATCGCTGGGAAGATAagcaaattctcaaaattttgggAG GACGAACTAAAAACACCTTTCCCACTGATGGACACTGTTAAAAATGGCTA TAAATTGCCTTTTGAATGCACTCCTCCCcctttttatgcaaaaaacaaTG CGTCGAGTTTAAAAAACAAAGACTTTGTCGAAACATCAATTAACGAGCTG CTAATCGAGGGCCGTATAAAACAAGTAAAAGAGGTTCCTTTTTGTGTTAA CCCCCTGACTGTCGTAGAGAAAAATTCTAAACTTCGTCTTGTACTTGATC TCAGGCATATAAATTCTTACATACAACCTCCAAAATTCAAATATGAAGAT TTAAAAACTGCAGCCGAAATTCTGGACCAGAATGATTTTatgataacttt tgatttaactAGTGGCTATCATCACGTACCAATAAACaacaatttccaaa aatttcttgGGTTCGCATGGGATTACAACGGTGAAacaaaatactttatt tttcgTGTGCTACCTTTTGGTTTGAATATTGCTTGTTGGATTTTTACAAA ACTAATGCGACAACTAGTTAAGAGATGGCGCCGTCAAGGGATTAAATGTG CCATGTACCTCGATGATGGAATCTTAGGTTGCAGTAGTTTCAGTAAAATG ACTGAAAACCGGATAGTTATTCTTCGAGATTTGTGGTCAGCAGGGTTAac gttaaatttaaaaaaatctagtCTCAAACCAGAAAGGCAAAAGATTTGGC TAGGCTTTATCGTGGACactgaaaatatgatttttgaaGTCCCTGAAGAA AAAGGGGGTTCTTTCAGATATTACTTCAACCTTAAAATCTGAATATTCGT CTGCCAGAACTATTTCAAAAATAGCCGGTCAGTTAATTTCAATGGCAATT GCTATCGGGCCTCCAGCGTATTTATTTACTAAACAGATGTACAAATTTGT CGAATCAAAAAATACCTGGGACAGAAGACACCTTTTGAATTACGATGTCA AATACGAACTAGAATTTTGGatacaaaatctttcaaaaacaaaaactttt cgtATAAAATCAAGACCGGAAATAACAAAAGTTGTTTATTCTGATGCTAG CGGTACAGGATACGGAGGCTACGCCGTAGAAGAACTAGGTGACGTCATCG CCAAAGGAAGTTTTAGTGCTCTCGAGAGGAATACTAGCTCAACATATCGC GAGCTTCTTGCAGTTAAATATGTTTTACAGTCTATTATTCATTTGTTAAA AGGCAAGACAATAGAATGGTTCACTGACAACGACAACACATGCAAAATTA TTAAAAGTGGTAGTACAAAACAACACCTCCAGAATTTAGCTGtccaaatt tttaatatttgcgtTGTTAATAACATTACTATTTTTCCTACATGGATCCC AAGAGAGGAAAACGAACCGGCTgacattatttcaaaatctaTAGATACAG ATAATTGGTCCATCGACAATGCGACTTTTCTATACATAATTTCACATTTC GGATCGATTACCATAGATCGATTTGCAGATAATTTAAATACAAAGTCAAA ACGTTTCAATTCCAAAGAATTCTGTCCAACCTCGTCTGGTATGAATGCAT TCACTTGCCATTGGGGAAAAGGTGAACTTAATTGGTTATGTCCTCCAATT TCTTTAGTCGGAAAAACAATCAACCATCTAAAAAACTGTCAAGGGAAAGG TATTCTTTTTATACCGTTATGGCCATCTGTCTATTTTTGGCCTATGATAA CTTCCAATGGAAAAGAATTCAAGCCTTTTGTTAAGCAATTTCTTGTGTTA GACccttattttattaataattctgacatttcttgtatttttgatgGTTT CGCTAATTTTTACTCGTTAGCACTGTACATCACTTTCGAAGATGaataaa atacactttttccGATGCTTACTGTCTCTGTTAATAGTTTTTTGTTACTC TACTGAATGAATTAttggaaatgtttattttttgttgttgtgtaTGTACT TGACACTAGAGGCAAGAACATGTTTGTTCTTTTTCCGATCCAAGTTTTTT ATGATGCAATCTTGTAAtttcttttctcattttcatgTGTAAAAACTGAG AACAAACGATGAAGCATGGTATCAATGCTATATTTGCTGGTATCGACATT GTTATCAATTGTGGATATCGTGCTCTGTTGCAGATATCAATGTTTTGAGA TTATGGTGCACATATGTTGCACATTGGTGGATACCGACATTATTATCAAT TTGTGGATATCGTGCTCTGTTGCAGATATCAGTGTTTTGAGATTATGATG CACATATGTTGCATATTTGTGGATATGAATGCCTCGTTGCTCATATCAGT TTTTGGTATCATGCTCTGTTGCAATACCTTTTAAAGATATCTTTTGCGTG AGGAAGATATCGATTGACGATTATCATGGTATCACTGCTTTGTTGCATAT GCCACTTCCAGAGGTATGAGagtttttttcttatattatttcttttatca ttttattcaGAAGAAGTTACGCATCCCCTTCTCGAGCAAAGGATAGAGGC AATCAAAGATCAGAGGCTAAGGGAAAAAGCAGCTAATCTCCCCGATCTCT TAGAGGCCGCCTATGCCGAATCAACTCTGAAAAAGTACAAACCTGCGTGG GAAAAATGGAagatttgggccaaaaactttGAAGAAGTGTCTTTTTGTCC TGCAGACCCCTTTTTTGTGGCAATCTACTTGAATGATTTAACTTGCTCAG ACGCGACCGAAGGAGCCCTAACTACCGCTATGATGGGAATCAGGTGGAGT CACCATACATCTGGTTTTTCTTCTCCTACGGACAACCCTCTGGTAAAACT CGCATTCGAAGGTGGGAAACGCATTATTGCGAATAGAAACCCCGATGCTA AACGAAATCGAAAAGAGCCTATTACATCTGAGTTTTTGAAAGTTATTGTT GATCGTTACACCACTTCGGACAACCTAATTGATATGAGATTTATATTGAT GACCGTACTTGGTTTTTCCGGATTTTTCAGAATAAGCGAAATGTTAGAAA TCCAGATCAAAGATATTACTCTTTGTACAGATGGAGTGAAAATCTTCCTA CCAAGTTCAAAAACCGATCAACTGAGAGAAGGAGACACAGTTTTCATTAG CGAGACAAAGACACCTTACTGTTCTGTCTACTGGCTTCGAAAATATCTTC ATCTCACAAAGCTTAAGAAACCtaaagattttctattttgtaggCTTTTC AAGTGTAAGGTAGGTCATTCGGCCCATGGTCATTATCAAATATCCTACAC GACTGCAAGGGAATCTTTTAAGGAGCATTTGTCAAATATTATTACAGACA CAAGACAGTATGGTCTACATTCTTTACGTTCTGGAGGCGCCTCAGAGGCT GCGAACAATGGTGTCTCGGACCGTATGATTTCGAAGCACGGTCGTTGGTC CTCTAATACAAGCAGAGATAAGTACATCAAGGACAGTCATGCTAACAGGT TCAAAGTTTCCAACCGATTAGGAATATAATCGAAGAGTTTTTGCATCCAt accttttcttttcttctcctCGTGTTTTTCATTGCAAGATGTATCCAata aacaaagaaattcatGTCTCTTATTATTTCTACTTTCTATGTATTATTCT TAAGCTTTGAGGAGAAATAGTGGAGAAGCGTGTTTCTCGGCGATCGAAGA AAGACGGGAAACGAGTTTCTCAACGGTTTCGCACACAAAGCTGCTTGATG ATCTTTGCGCAGATTGGGACAAGCTGCGCGCATGCGTCAAAAATGCGTGT TTAAATGTCTCatcttttcatttcaaaatcctCGCTCTTGCAAAAAGTTT GTAGTTAAGTTAAGCTAATcacttctatttctttttttgctttcaTGTAA AAACGAGACGAATCGACATCAGCATTGGAGAAAACAACGGGATTCAACGA CATTGTTCGATATGGTTCATGCACGGCTATCCTCATTACAAGCAGCGAAG TGGGCCACTTTTACGGTTACACGCGATCTTTAATGAATCCAGATTACGGA ACAACGCTGTTTTTAACGTACTTTGTGTATagcttttttattatttacaa AGGGAGGACCTTTAAACTCCGGAGGTCGGGGTGACTGATGCACTCGGTTC GGAGATAATGTTTCCTCCAGAAACAGCCAGTGGGGGTTTTGCGCTACCTG CTTAGTCACCGTTAGTACTAATATATCCCTTTTTTATTGTAATAATGAAT AATATTaattttatcgatatttttattctgaCCGGTCTTGCGGCACTATT CACATGTAAACTATTCAATTTTTCACCTGATAATTGTTTCACACATTGCT GTTGGCACGATTGCAGAAGGATCTATTACATTTATCCTGTTATTCTTCTA ACATTTTGCATGCTTATTGGAAAGAACGTACATTCAATGGATAGTATATT TCAAATTCGTTCTAGTTATCAAATTATGGTGCGTGATGTTCAAAAGATAC AACAAATGATTGCTTTAGCATTTCATTTTTACCTTATAACCTAAAATTTa cgaatttataaaaatatctcAACTACATGTTTTTCATTGCAAGATGTATC CAataaacaaagaaattcatGTCTCTTATTATTTCTACTTTCTATGTATT ATTCTTAAGCTTTGAGGAGAAATAGTGGAGAAG

Coding sequence (CDS) from alignment at scaffold_448:601950..607082

>TCONS_00066021 ID=TCONS_00066021|Name=TCONS_00066021|organism=Clytia hemisphaerica|type=CDS|length=1119bp|location=Sequence derived from alignment at scaffold_448:601950..607082 (Clytia hemisphaerica)
ATGGCTCAAAACGAAGAGTTAAGAAATACCATAAAACAGATTTTGGTTGA
GGAACAGAAGAAGGAAGGCTCTTCCATATCAAAGTTGAAGCAAAGACTCG
AAAGAAAAAGAACATACGACCAGacaacgttttcaaaacgtGGGCATGAA
GAACAATTCAAACACACAGTCGAAGTAATCGAAAGTCTAGATGATGCCAT
AGAAGCACTGGAAACCGGAGAAAATGAATCTGCTTTAACATTCATAAAAC
AAGAGTACTGGGAATTTCTTCAATCAAACGAAACTTGTATCGCTGGGAAG
ATAagcaaattctcaaaattttgggAGGACGAACTAAAAACACCTTTCCC
ACTGATGGACACTGTTAAAAATGGCTATAAATTGCCTTTTGAATGCACTC
CTCCCcctttttatgcaaaaaacaaTGCGTCGAGTTTAAAAAACAAAGAC
TTTGTCGAAACATCAATTAACGAGCTGCTAATCGAGGGCCGTATAAAACA
AGTAAAAGAGGTTCCTTTTTGTGTTAACCCCCTGACTGTCGTAGAGAAAA
ATTCTAAACTTCGTCTTGTACTTGATCTCAGGCATATAAATTCTTACATA
CAACCTCCAAAATTCAAATATGAAGATTTAAAAACTGCAGCCGAAATTCT
GGACCAGAATGATTTTatgataacttttgatttaactAGTGGCTATCATC
ACGTACCAATAAACaacaatttccaaaaatttcttgGGTTCGCATGGGAT
TACAACGGTGAAacaaaatactttatttttcgTGTGCTACCTTTTGGTTT
GAATATTGCTTGTTGGATTTTTACAAAACTAATGCGACAACTAGTTAAGA
GATGGCGCCGTCAAGGGATTAAATGTGCCATGTACCTCGATGATGGAATC
TTAGGTTGCAGTAGTTTCAGTAAAATGACTGAAAACCGGATAGTTATTCT
TCGAGATTTGTGGTCAGCAGGGTTAacgttaaatttaaaaaaatctagtC
TCAAACCAGAAAGGCAAAAGATTTGGCTAGGCTTTATCGTGGACactgaa
aatatgatttttgaaGTCCCTGAAGAAAAAGGGGGTTCTTTCAGATATTA
CTTCAACCTTAAAATCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041344XLOC_041344Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066021-proteinTCONS_00066021-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066021-exon-scaffold_448-1491911889:601950..607082TCONS_00066021-exon-scaffold_448-1491911889:601950..607082Clytia hemisphaericaexon
TCONS_00066021-exon-scaffold_448-1510915933:601950..607082TCONS_00066021-exon-scaffold_448-1510915933:601950..607082Clytia hemisphaericaexon
TCONS_00066021-exon-scaffold_448-1575043694:601950..607082TCONS_00066021-exon-scaffold_448-1575043694:601950..607082Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_448supercontigscaffold_448:601950..607082 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.84083 5.04705 4.63011 2.33262 0.0618199 0.0566381 0.137637 0.237481 0.237707 0.296575 0.185439 0.331727 0.174613 0.215966 0.147282 0.186726 0.19503 0.320809 0.14456 0.0740879 0.200343 0.153049 0.827882 0.903671 0.290765 0.428929 0.0150549 0.0342561 0.39803 0.26843
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066021 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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