TCONS_00066027-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066027-protein
Unique NameTCONS_00066027-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length216

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066027-protein ID=TCONS_00066027-protein|Name=TCONS_00066027-protein|organism=Clytia hemisphaerica|type=polypeptide|length=216bp
MDSRRKTALKSLKRKDTVGMLLLGDVDIGKSALIRRWVNNDFPENYQATV
EDFFMKTIICMNQRVNVTIIDIAGSRQFPTMDDLYIARSDVLMLVYEIGN
QKSIDSMKWYYDSARKTLNDKKVAFIVVGTKYDKHGSDIHQNIETGLEFF
TELPEQPAQFSTSAKNGYNVKELFEHGVKEILKNNNVSDKRAKFERQITI
EAMEDEKEKKPCCTIL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041349XLOC_041349Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066027TCONS_00066027Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 41..57
score: 27.65
coord: 121..134
score: 33.35
coord: 18..39
score: 31.07
coord: 159..181
score: 35.4
coord: 58..80
score: 23.42
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 15..184
e-value: 1.6E-11
score: 45.8
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 20..184
e-value: 7.3E-6
score: -42.6
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 18..184
e-value: 3.2E-11
score: 30.4
NoneNo IPR availableGENE3D3.40.50.300coord: 11..192
e-value: 1.4E-32
score: 111.9
NoneNo IPR availablePROSITEPS51419RABcoord: 13..213
score: 16.083
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 20..182
e-value: 1.1E-30
score: 106.3
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 20..175
e-value: 5.3E-19
score: 66.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..193

Blast
[Close]
BLAST of TCONS_00066027-protein vs. Swiss-Prot (Human)
Match: DIRA2 (GTP-binding protein Di-Ras2 OS=Homo sapiens GN=DIRAS2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.516e-20
Identity = 53/155 (34.19%), Postives = 82/155 (52.90%), Query Frame = 0 
Query:   22 LLGDVDIGKSALIRRWVNNDFPENYQATVEDFFMKTIICMNQRVNVTIIDIAGSRQFPTMDDLYIARSDVLMLVYEIGNQKSIDSMKWYYDSARKTLND-KKVAFIVVGTKYDKHGSDIHQNIETGLEFFTELPEQPAQFSTSAKNGYNVKELFE 175
            + G   +GKS+L+ R+V   F E+Y  TVED + + I C      + I D  GS QFP M  L I++    +LVY I +++S++ +K  Y+   +   D + +  ++VG K D+  S   Q+ E      T    + A   TSAK  +NVKELF+
Sbjct:   12 VFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPSREVQSSEAEALART---WKCAFMETSAKLNHNVKELFQ 163
The following BLAST results are available for this feature:
BLAST of TCONS_00066027-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DIRA22.516e-2034.19GTP-binding protein Di-Ras2 OS=Homo sapiens GN=DIR... [more]
back to top