TCONS_00066160-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00066160-protein
Unique Name	TCONS_00066160-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	480

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00066160-protein ID=TCONS_00066160-protein|Name=TCONS_00066160-protein|organism=Clytia hemisphaerica|type=polypeptide|length=480bp
MAGLALVLSYVLENSFICIERIAFIQSWLLNSTNLQHIHWSVDLKQQQIQ
EVMAGNEEDFEINYDELVKMLVYSAKNLFTANGSSKQLGMQMKCMELFER
DYKIQIIDNDEGELCTTYPNKMAYFLGYQDEEEDRISRESARRSLPIAPG
RYRQYVERTKTARVYSRFILPCIFMKNFKVVSRAATISTTAEVFWKNGIR
GILPQKFSSRMDRDKKYADDSWDLNIVNKKRLVDIELLKQMNIQYIVDMM
VEVKKIKHGVIVSSSEKVDKHQRYKEFDLICTPFPGCELMMDMDQLFSKE
GLFFDWTEDFVNTELMVPNTVLQYADEIDWTKYKEWDIVLLLQNYMLLMI
RTLREGKSNMMIHCISGWDRTPMWTCLLRLSLWADGETHPNLNADEILYL
TLAYDWFFFGHNLGNRRRRGEFVLHFTYMFLPYIRSEKYSIHGRDSEKLK
ERDEKIMAVYKRYKEIDIATFGIPYKTTSV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041412	XLOC_041412	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00066160	TCONS_00066160	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029021	Prot-tyrosine_phosphatase-like
IPR010569	Myotubularin-like_Pase_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029021	Protein-tyrosine phosphatase-like	GENE3D	3.90.190.10		coord: 181..463 e-value: 5.8E-8 score: 32.0
IPR029021	Protein-tyrosine phosphatase-like	SUPERFAMILY	52799	(Phosphotyrosine protein) phosphatases II	coord: 225..442 coord: 98..189
IPR010569	Myotubularin-like phosphatase domain	PFAM	PF06602	Myotub-related	coord: 98..416 e-value: 6.2E-5 score: 22.0

Blast

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BLAST of TCONS_00066160-protein vs. Swiss-Prot (Human)
Match: MTMRE (Myotubularin-related protein 14 OS=Homo sapiens GN=MTMR14 PE=1 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 1.811e-86
Identity = 149/375 (39.73%), Postives = 232/375 (61.87%), Query Frame = 0

Query:   73 YSAKNLFTANGSSKQLGMQMKCMELFERDYKIQIIDNDEGELCTTYPNKMAYFLGYQDEEEDRISRESARRSLPIAPGRYRQYVERTKTARVYSRFILPCIFMKNFKVVSRAATISTTAEVFWKNG----IRGILPQKFSSRMD-RDKKYADDSWDLNIVNKKRLVDIELLKQMNIQYIVDMMVEVKKIKHGVIVSSSEKVDKHQRYKEFDLICTPFPGCELMMDM-DQLFSKEGLFFDWTEDFVNTELMVPNTVLQYADEIDWTKYKEWDIVLLLQNYMLLMIRTLR-EGKSNMMIHCISGWDRTPMWTCLLRLSLWADGETHPNLNADEILYLTLAYDWFFFGHNLGNRRRRGEFVLHFTYMFLPYIRSEKYS 440
            Y AK+  +  G SK   ++ +C+ELF RDY   +I N  G++C  YP  +  FL Y+  E+++ + ES      +   + +  + R+K AR   RF+ P I  K  K + R+AT++   E++ ++G      G     ++   D  ++  A  S D ++ +K R  DI+LL+ ++++YI D+MVE KK+K G+ V+SSEKVDK QRY +F L+  P+PGCE   +  D+ +  EGL F+W +D+V+  L +P+  L ++  IDW++Y+ WD+V   QNY+ L++  +  +  S +++HCISGWDRTP++  LLRLSLWADG  H +L   EILYLT+AYDWF FGH L +R  +GE +  F + FL +I SE++S
Sbjct:   41 YRAKD-GSGTGGSKVERIEKRCLELFGRDYCFSVIPNTNGDICGHYPRHIV-FLEYESSEKEKDTFEST-----VQVSKLQDLIHRSKMARCRGRFVCPVILFKG-KHICRSATLAGWGELYGRSGYNYFFSGGADDAWADVEDVTEEDCALRSGDTHLFDKVRGYDIKLLRYLSVKYICDLMVENKKVKFGMNVTSSEKVDKAQRYADFTLLSIPYPGCEFFKEYKDRDYMAEGLIFNWKQDYVDAPLSIPD-FLTHSLNIDWSQYQCWDLVQQTQNYLKLLLSLVNSDDDSGLLVHCISGWDRTPLFISLLRLSLWADGLIHTSLKPTEILYLTVAYDWFLFGHMLVDRLSKGEEIFFFCFNFLKHITSEEFS 406

The following BLAST results are available for this feature:

BLAST of TCONS_00066160-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00066160-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MTMRE	1.811e-86	39.73	Myotubularin-related protein 14 OS=Homo sapiens GN...	[more]

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TCONS_00066160-protein (polypeptide) - C. hemisphaerica