|
|
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00066237-protein ID=TCONS_00066237-protein|Name=TCONS_00066237-protein|organism=Clytia hemisphaerica|type=polypeptide|length=379bp
MDVQIPPGLTELMQDFTVAALRERPNDIVDFAADYFVKLRESKKQYDGGA
KPKGVQFSGGQDSDESSGEEPEPPKNRYARRQSVCAEAYNPDESDDEDEK
LVVHPKSDVQRKRLNEAVGNILLFKNLDNEQLNNVLDAMFERKTTADEHI
IDQGDDGDNFYVIDRGIFDIYVKIDGSDKKVGAYNNKGSFGELALMYNTP
RAATIVSNDEGIIWALDRVTFRRIVLKAAYLRRKMHEALLEKVPMLKHLN
EFERMNVADALESRQYNDDVTIIRQGEEGSSMFFIEKGEVSVKIQDDSGR
EVEVTTLREGQYFGELALVTHKPRAASVYSKGDCKVAALDILAFERLLGS
CMEVMKRSIGDYEEQLKKLGLSNRDLRGK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005952 | cAMP-dependent protein kinase complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0001932 | regulation of protein phosphorylation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008603 | cAMP-dependent protein kinase regulator activity |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0001932 |
regulation of protein phosphorylation |
| cellular_component |
GO:0005952 |
cAMP-dependent protein kinase complex |
| molecular_function |
GO:0008603 |
cAMP-dependent protein kinase regulator activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PRINTS | PR00103 | CAMPKINASE | coord: 144..158
score: 54.44
coord: 344..356
score: 57.44
coord: 159..173
score: 61.56
coord: 311..320
score: 71.67
coord: 323..334
score: 55.28 |
| None | No IPR available | GENE3D | 1.20.890.10 | | coord: 3..41
e-value: 2.2E-16
score: 58.7 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 44..80 |
| None | No IPR available | CDD | cd12099 | DD_RII_PKA | coord: 5..43
e-value: 2.25629E-18
score: 76.9007 |
| None | No IPR available | CDD | cd00038 | CAP_ED | coord: 123..236
e-value: 1.49583E-24
score: 95.4705 |
| None | No IPR available | CDD | cd00038 | CAP_ED | coord: 245..357
e-value: 2.54761E-30
score: 111.649 |
| IPR000595 | Cyclic nucleotide-binding domain | SMART | SM00100 | cnmp_10 | coord: 123..240
e-value: 2.5E-19
score: 80.2
coord: 245..363
e-value: 4.9E-27
score: 105.8 |
| IPR000595 | Cyclic nucleotide-binding domain | PFAM | PF00027 | cNMP_binding | coord: 264..349
e-value: 5.3E-20
score: 71.1
coord: 142..226
e-value: 3.2E-17
score: 62.2 |
| IPR000595 | Cyclic nucleotide-binding domain | PROSITE | PS50042 | CNMP_BINDING_3 | coord: 123..242
score: 38.577 |
| IPR000595 | Cyclic nucleotide-binding domain | PROSITE | PS50042 | CNMP_BINDING_3 | coord: 245..365
score: 37.103 |
| IPR003117 | cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain | SMART | SM00394 | akam_3 | coord: 7..44
e-value: 2.3E-9
score: 47.1 |
| IPR003117 | cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain | PFAM | PF02197 | RIIa | coord: 8..41
e-value: 6.6E-11
score: 41.6 |
| IPR003117 | cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain | SUPERFAMILY | 47391 | Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit | coord: 3..43 |
| IPR014710 | RmlC-like jelly roll fold | GENE3D | 2.60.120.10 | | coord: 113..236
e-value: 8.0E-29
score: 99.6 |
| IPR014710 | RmlC-like jelly roll fold | GENE3D | 2.60.120.10 | | coord: 237..378
e-value: 1.5E-34
score: 118.2 |
| IPR012198 | cAMP-dependent protein kinase regulatory subunit | PIRSF | PIRSF000548 | PK_regulatory | coord: 11..376
e-value: 7.6E-130
score: 431.8 |
| IPR018488 | Cyclic nucleotide-binding, conserved site | PROSITE | PS00888 | CNMP_BINDING_1 | coord: 150..166 |
| IPR018488 | Cyclic nucleotide-binding, conserved site | PROSITE | PS00889 | CNMP_BINDING_2 | coord: 313..330 |
| IPR018488 | Cyclic nucleotide-binding, conserved site | PROSITE | PS00888 | CNMP_BINDING_1 | coord: 272..288 |
| IPR018488 | Cyclic nucleotide-binding, conserved site | PROSITE | PS00889 | CNMP_BINDING_2 | coord: 190..207 |
| IPR018490 | Cyclic nucleotide-binding-like | SUPERFAMILY | 51206 | cAMP-binding domain-like | coord: 239..361 |
| IPR018490 | Cyclic nucleotide-binding-like | SUPERFAMILY | 51206 | cAMP-binding domain-like | coord: 104..233 |
Blast
BLAST of TCONS_00066237-protein vs. Swiss-Prot (Human)
Match: KAP2 (cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Homo sapiens GN=PRKAR2A PE=1 SV=2) HSP 1 Score: 410.994 bits (1055), Expect = 9.580e-143 Identity = 210/396 (53.03%), Postives = 268/396 (67.68%), Query Frame = 0
Query: 3 VQIPPGLTELMQDFTVAALRERPNDIVDFAADYFVKLRESK-----------KQYDGGAKPKG----VQFSGGQDSDESSGEEPEPPKNRYARRQSVCAEAYNPDESDDEDEKLVVHPKSDVQRKRLNEAVGNILLFKNLDNEQLNNVLDAMFERKTTADEHIIDQGDDGDNFYVIDRGIFDIYVKIDGSDKKVGAYNNKGSFGELALMYNTPRAATIVSNDEGIIWALDRVTFRRIVLKAAYLRRKMHEALLEKVPMLKHLNEFERMNVADALESRQYNDDVTIIRQGEEGSSMFFIEKGEVSVKI-------QDDSGREVEVTTLREGQYFGELALVTHKPRAASVYSKGDCKVAALDILAFERLLGSCMEVMKRSIGDYEEQLKKLGLSNRDL 376
+QIPPGLTEL+Q +TV LR++P D+V+FA +YF +LRE++ +Q G P+ V + G E + P +R+ RR SVCAE YNPDE +++ + V+HPK+D QR RL EA +ILLFKNLD EQL+ VLDAMFER ADEH+IDQGDDGDNFYVI+RG +DI V D + VG Y+N+GSFGELALMYNTPRAATIV+ EG +W LDRVTFRRI++K +RKM E+ +E VP+LK L ERM + D + + Y D II QGE+ S + IE GEVS+ I +D +EVE+ +GQYFGELALVT+KPRAAS Y+ GD K +D+ AFERLLG CM++MKR+I YEEQL K+ S+ DL
Sbjct: 4 IQIPPGLTELLQGYTVEVLRQQPPDLVEFAVEYFTRLREARAPASVLPAATPRQSLGHPPPEPGPDRVADAKGDSESEEDEDLEVPVPSRFNRRVSVCAETYNPDEEEEDTDPRVIHPKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFERIVKADEHVIDQGDDGDNFYVIERGTYDILVTKDNQTRSVGQYDNRGSFGELALMYNTPRAATIVATSEGSLWGLDRVTFRRIIVKNNAKKRKMFESFIESVPLLKSLEVSERMKIVDVIGEKIYKDGERIITQGEKADSFYIIESGEVSILIRSRTKSNKDGGNQEVEIARCHKGQYFGELALVTNKPRAASAYAVGDVKCLVMDVQAFERLLGPCMDIMKRNISHYEEQLVKMFGSSVDL 399
The following BLAST results are available for this feature:
|
