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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00066273-protein ID=TCONS_00066273-protein|Name=TCONS_00066273-protein|organism=Clytia hemisphaerica|type=polypeptide|length=695bp
IEKFQYLKSYLIDEAADAIKGLRLSAENYDKAREMLEQRFGDTQVLISHH
MSQLLDIPPCANVENLKELRKLHDSIEFAIRNLETLGLDQKEYGPMLSPI
LLNKIPVEIKLIVSRTLEKNQKWDISKIMNTFLTELEAREKVSTSYTEEG
AYACSGASLHVSSKFENKQKREFHRKEDNQKLICIFCRRGHRSRDCDIIT
KPEIRKTILQKENRCFICMKIGHRAQKCSNKMKCFNCKGRHHVAVCTYKS
DSSQSNSPNANSSHQKEEKKEEKDQHPIVPVTTSNFVDVNKVNSVLLKTA
RAEIFTIDEKHSKNVRLLFDDGSMSSYVTKELCKELCLKPIAKQKVAIKT
FGQNKTIKELDVVELCIKSKDNRESLYIEAFVNDICLPIENQNISLAKEQ
YEPLNFVDLADSNPRNLPMTIDILIGSAHYWNFIGNKQIRCPDGPTALES
KLGYVLSGPIASNDTSPATSNLFVTTHALKVASEFVDPRHEIRDHLHQIY
DTNNEIPSDPDVLKTFDETTKFRDGRYEVQLPFKSESIDTLGDNYNTCRK
RLRNLTKTFKNNPDLLQEYASILENQESLGVIERIEPNDYKVGETHYLPH
RAVVHEQRETTKVRVVFDASCKSGKDAPSLNDVLESGPSLTPLLQDVLMR
FRSFNYLVVADIEKAFLNIALAREHQDYVRFLWFRDISNINFEHF Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
| molecular_function |
GO:0008270 |
zinc ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 19..39 |
| None | No IPR available | GENE3D | 3.10.10.10 | | coord: 553..695
e-value: 9.4E-10
score: 38.1 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 250..276 |
| None | No IPR available | SUPERFAMILY | 56672 | DNA/RNA polymerases | coord: 557..684 |
| IPR001878 | Zinc finger, CCHC-type | SMART | SM00343 | c2hcfinal6 | coord: 233..248
e-value: 35.0
score: 1.7
coord: 214..230
e-value: 0.045
score: 19.5
coord: 183..198
e-value: 8.0
score: 5.7 |
| IPR001878 | Zinc finger, CCHC-type | GENE3D | 4.10.60.10 | | coord: 152..221
e-value: 0.0076
score: 15.7
coord: 222..252
e-value: 5.7E-4
score: 19.3 |
| IPR005312 | Protein of unknown function DUF1759 | PFAM | PF03564 | DUF1759 | coord: 1..113
e-value: 4.0E-25
score: 88.4 |
| IPR021109 | Aspartic peptidase domain | GENE3D | 2.40.70.10 | | coord: 270..426
e-value: 9.1E-6
score: 25.4 |
| IPR008737 | Peptidase aspartic, putative | PFAM | PF05585 | DUF1758 | coord: 312..463
e-value: 1.6E-13
score: 50.7 |
Blast
The following BLAST results are available for this feature:
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