TCONS_00066466-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066466-protein
Unique NameTCONS_00066466-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length407

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066466-protein ID=TCONS_00066466-protein|Name=TCONS_00066466-protein|organism=Clytia hemisphaerica|type=polypeptide|length=407bp
FTGMTSEESAALTSAMKKSGDVLDWPAEWKDQVVDKHSTGGVGDKISLIL
APAVASCGLKLPMISGRSLGFTGGTLDKLESIPGFNIKFSPEDITKALET
AGCCIVGQTATLVPADKILYSIRDITSTVGSFPLIASSIVSKKAAEGISA
LVLDVKYGSGSYQKTLFQAEELASLMVDISCQLGIKTSAVITHMDHPIGK
MVGNAVEVIESIECLQGKGPNDLMELVTTQGGVLLYLKGICESPEKGKEE
IERRIKNGDALKKFEEMAIVQGVEKTVAENLCKNPYSVLSLSSNNTILHA
SSSGFISDMKAISFGEVSSRLGNGRQVPTDDVTYDTGIQILRHVGDEVKS
GDPILKVYHKEKTLDAGFKSKLEQAVTVSSTKPKPRNRVEKVIHRSSSSS
RIFMVSQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041580XLOC_041580Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066466TCONS_00066466Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013102PYNP_C
IPR000312Glycosyl_Trfase_fam3
IPR000053Thymidine/pyrmidine_PPase
IPR018090Pyrmidine_PPas_bac/euk
Vocabulary: Biological Process
TermDefinition
GO:0006213pyrimidine nucleoside metabolic process
GO:0008152metabolic process
GO:0006206pyrimidine nucleobase metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016763transferase activity, transferring pentosyl groups
GO:0016757transferase activity, transferring glycosyl groups
GO:0004645phosphorylase activity
GO:0016154pyrimidine-nucleoside phosphorylase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006213 pyrimidine nucleoside metabolic process
molecular_function GO:0004645 phosphorylase activity
molecular_function GO:0016154 pyrimidine-nucleoside phosphorylase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0016763 transferase activity, transferring pentosyl groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013102Pyrimidine nucleoside phosphorylase, C-terminalSMARTSM00941PYNP_C_2coord: 305..379
e-value: 8.0E-9
score: 45.3
IPR013102Pyrimidine nucleoside phosphorylase, C-terminalPFAMPF07831PYNP_Ccoord: 305..373
e-value: 5.4E-15
score: 54.7
IPR013102Pyrimidine nucleoside phosphorylase, C-terminalSUPERFAMILY54680Pyrimidine nucleoside phosphorylase C-terminal domaincoord: 298..393
IPR000312Glycosyl transferase, family 3GENE3D3.40.1030.10coord: 22..290
e-value: 5.5E-84
score: 281.1
IPR000312Glycosyl transferase, family 3PFAMPF00591Glycos_transf_3coord: 31..261
e-value: 4.2E-38
score: 131.3
IPR000312Glycosyl transferase, family 3SUPERFAMILY52418Nucleoside phosphorylase/phosphoribosyltransferase catalytic domaincoord: 27..282
IPR000053Thymidine/pyrimidine-nucleoside phosphorylasePIRSFPIRSF000478TP_PyNPcoord: 1..395
e-value: 7.4E-131
score: 434.5
NoneNo IPR availableGENE3D3.90.1170.30coord: 291..385
e-value: 3.9E-17
score: 61.7
IPR018090Pyrimidine-nucleoside phosphorylase, bacterial/eukaryoticTIGRFAMTIGR02644TIGR02644coord: 1..378
e-value: 4.1E-128
score: 425.7

Blast
[Close]
BLAST of TCONS_00066466-protein vs. Swiss-Prot (Human)
Match: TYPH (Thymidine phosphorylase OS=Homo sapiens GN=TYMP PE=1 SV=2)

HSP 1 Score: 340.887 bits (873), Expect = 9.201e-114
Identity = 175/387 (45.22%), Postives = 243/387 (62.79%), Query Frame = 0 
Query:    1 FTGMTSEESAALTSAMKKSGDVLDWPAEWKDQVVDKHSTGGVGDKISLILAPAVASCGLKLPMISGRSLGFTGGTLDKLESIPGFNIKFSPEDITKALETAGCCIVGQTATLVPADKILYSIRDITSTVGSFPLIASSIVSKKAAEGISALVLDVKYGSGSYQKTLFQAEELASLMVDISCQLGIKTSAVITHMDHPIGKMVGNAVEVIESIECLQGKGPNDLMELVTTQGGVLLYLKGICESPEKGKEEIERRIKNGDALKKFEEMAIVQGVEKTVAENLCKNPYS----VLSLSSNNTILHASSSGFISDMKAISFGEVSSRLGNGRQVPTDDVTYDTGIQILRHVGDEVKSGDPILKVYHKEKTLDAGFKSKLEQAVTVSSTKP 383
              GM  EE++ LT A+ +SG  L+WP  W+ Q+VDKHSTGGVGDK+SL+LAPA+A+CG K+PMISGR LG TGGTLDKLESIPGFN+  SPE +   L+ AGCCIVGQ+  LVPAD ILY+ RD+T+TV S PLI +SI+SKK  EG+SALV+DVK+G  +      QA ELA  +V +   LG++ +A +T MD P+G+ VG+A+EV E++ C+ G GP DL +LVTT GG LL+L G   +  +G   +   + +G AL +FE M   QGV+  +A  LC    +    +L  +     L A + G +  ++A+    V   LG GR    + +    G ++L  VG  ++ G P L+V+     L       L++A+ +S   P
Sbjct:   80 LRGMDLEETSVLTQALAQSGQQLEWPEAWRQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLESIPGFNVIQSPEQMQVLLDQAGCCIVGQSEQLVPADGILYAARDVTATVDSLPLITASILSKKLVEGLSALVVDVKFGGAAVFPNQEQARELAKTLVGVGASLGLRVAAALTAMDKPLGRCVGHALEVEEALLCMDGAGPPDLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQGVDPGLARALCSGSPAERRQLLPRAREQEELLAPADGTVELVRALPLALVLHELGAGRSRAGEPLRLGVGAELLVDVGQRLRRGTPWLRVHRDGPALSGPQSRALQEALVLSDRAP 466
The following BLAST results are available for this feature:
BLAST of TCONS_00066466-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TYPH9.201e-11445.22Thymidine phosphorylase OS=Homo sapiens GN=TYMP PE... [more]
back to top