Kelch like protein (polypeptide) - C. hemisphaerica

Overview
NameKelch like protein
Unique NameTCONS_00066593-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length638

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066593-protein ID=TCONS_00066593-protein|Name=Kelch like protein|organism=Clytia hemisphaerica|type=polypeptide|length=638bp
MNVLINQIIGITLFPSAILFRKIYHNKQKMTTKKKVNLDDMVDDWDSYIM
IETSKDGTVCTTSGLPTPKSCNKMLVLELNHELASEVLYARGHNIPCDVY
LKCDDGTIFSAHKNVLSVTSLYFNAMFQTNMIEKSQAIIDIRCVTSEALK
YLIDFAYSSTLYVSFYQIYDLLMASNMLCVEQVEHQCVAFLGQNLDIENC
IEIWSLAEMINCEPLYNASFNFVQNNFRRVSQELDFLQLSFQQMELILSN
DYIDVSSESDVFEAIINWVSYDSMARLPYLARLLQYVRFMLLSRKYLADR
VLRENLVMSDENSRNIVLQILDRYILPERTYSLNTNQSSTSPRQASNRKI
YVIGGKASGKCKSSMECYNFKTNSWRTLSRMKYPRYNAVAVTLDGNLYVL
GGYYRGKDLKVVERYNPITDEWRVVSSLRKCKGALSAISIDGWIYAVGGS
EGHQESLRHAEQYDPVSDTWTQLPDMLTPRSHFGIGRMFGQLHVIGGFSG
ICELDQCECFDPSQREWRRFNSLNTSRMNHGITNFNNRFYAFGGKNSTGL
VHSVEKYNPELNMWLIIKTNLDVKIGMVCVGKSNGTGNSVFIIGGKNENG
EESNSSTVLTFKPIGSDLNNEQIVPMKEKRIYSAIAYL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041642XLOC_041642Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066593TCONS_00066593Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011705BACK
IPR006652Kelch_1
IPR000210BTB/POZ_dom
IPR015915Kelch-typ_b-propeller
IPR017096BTB-kelch_protein
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011705BTB/Kelch-associatedSMARTSM00875BACK_2coord: 200..302
e-value: 1.8E-31
score: 120.5
IPR011705BTB/Kelch-associatedPFAMPF07707BACKcoord: 200..301
e-value: 1.5E-28
score: 98.8
IPR006652Kelch repeat type 1SMARTSM00612kelc_smartcoord: 491..537
e-value: 9.7E-8
score: 41.7
coord: 349..395
e-value: 2.8E-10
score: 50.2
coord: 396..442
e-value: 7.3E-8
score: 42.1
coord: 538..585
e-value: 1.3
score: 10.7
coord: 443..490
e-value: 5.6E-11
score: 52.5
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 437..476
e-value: 8.5E-10
score: 38.0
coord: 479..523
e-value: 2.5E-6
score: 26.9
coord: 384..429
e-value: 1.9E-13
score: 49.7
coord: 346..381
e-value: 1.2E-9
score: 37.4
coord: 526..564
e-value: 2.8E-5
score: 23.5
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 97..195
e-value: 5.7E-14
score: 62.4
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 95..194
e-value: 1.6E-20
score: 73.3
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 97..165
score: 17.273
NoneNo IPR availableGENE3D3.30.710.10coord: 82..234
e-value: 7.2E-30
score: 103.3
NoneNo IPR availableCDDcd14735BACK_Kelchcoord: 195..251
e-value: 4.79877E-17
score: 75.2079
NoneNo IPR availableSUPERFAMILY117281Kelch motifcoord: 348..610
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 338..448
e-value: 1.7E-25
score: 89.1
coord: 449..633
e-value: 2.5E-31
score: 108.3
IPR017096BTB-kelch proteinPIRSFPIRSF037037Kelch_gigaxonincoord: 66..638
e-value: 1.6E-130
score: 433.9
IPR011333SKP1/BTB/POZ domainSUPERFAMILY54695POZ domaincoord: 88..193

Blast
[Close]
BLAST of Kelch like protein vs. Swiss-Prot (Human)
Match: KLH28 (Kelch-like protein 28 OS=Homo sapiens GN=KLHL28 PE=2 SV=2)

HSP 1 Score: 292.738 bits (748), Expect = 5.918e-91
Identity = 173/531 (32.58%), Postives = 266/531 (50.09%), Query Frame = 0 
Query:   91 RGHNIPCDVYLKCDDGTIFSAHKNVLSVTSLYFNAMFQTNMIEKSQAIIDIRCVTSEALKYLIDFAYSSTLYVSFYQIYDLLMASNMLCVEQVEHQCVAFLGQNLDIENCIEIWSLAEMINCEPLYNASFNFVQNNFRRVSQELDFLQLSFQQMELILSNDYIDVSSESDVFEAIINWVSYDSMARLPYLARLLQYVRFMLLSRKYLADRVLRENLVMSDENSRNIVLQILDRYILPERTYSLNTNQSSTSPRQAS-----------------------------------------------NRKIYVIGGKASG--------KCKSSMECYNFKTNSWRTLSRMKYPRYNAVAVTLDGNLYVLGGYYRGKDLKVVERYNPITDEWRVVSSLRKCKGALSAISIDGWIYAVGG-SEGHQESLRHAEQYDPVSDTWTQLPDMLTPRSHFGIGRMFGQLHVIGGFSGICELDQCECFDPSQREWRRFNSLNTSRMNHGITNFNNRFYAFGGKNSTGLVHSVEKYNPELNMWL 565
            R H+  CD+ L+  D  I  AHK VL+  S YF AMF  N+ EK  + ++ +C+   AL+ ++++AY+ T+++S   +  LL A+N+L ++ V  +C AFL   LD  NCI I   AE   C  LY A+  ++  NF  V Q  +F +L+   ++ I+SND ++V++E  VF A+ +W+ YD   R  YLA+LL  VR  LLS K+L       +L+  D   ++++ + L  + +PE   S  T    T PR A                                                ++K+YVIGG A+         K ++S+EC+N  TN+W +L RM   R     V L G LY LGGY     L+ VE+Y P   +W+ V+ +   +   +A  +DG IYA+GG    H  S+   E+YDP  D+W  +  M   R HFG+G M G + V+GG +G+  L   E +DP Q +W     +   R   G    +N  Y  GG + +  +++V+KY+P  + WL
Sbjct:   29 RQHHELCDIILRVGDVKI-HAHKVVLASVSPYFKAMFTGNLSEKENSEVEFQCIDETALQAIVEYAYTGTVFISQDTVESLLPAANLLQIKLVLKECCAFLESQLDPGNCIGISRFAETYGCRDLYLAATKYICQNFEAVCQTEEFFELTHADLDEIVSNDCLNVATEETVFYALESWIKYDVQERQKYLAQLLNSVRLPLLSVKFLTRLYEANHLIRDDRTCKHLLNEALKYHFMPEHRLSHQT-VLMTRPRCAPKVLCAVGGKSGLFACLDSVEMYFPQNDSWIGLAPLNIPRYEFGICVLDQKVYVIGGIATNVRPGVTIRKHENSVECWNPDTNTWTSLERMNESRSTLGVVVLAGELYALGGYDGQSYLQSVEKYIPKIRKWQPVAPMTTTRSCFAAAVLDGMIYAIGGYGPAHMNSV---ERYDPSKDSWEMVASMADKRIHFGVGVMLGFIFVVGGHNGVSHLSSIERYDPHQNQWTVCRPMKEPRTGVGAAVIDNYLYVVGGHSGSSYLNTVQKYDPISDTWL 554
The following BLAST results are available for this feature:
BLAST of Kelch like protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KLH285.918e-9132.58Kelch-like protein 28 OS=Homo sapiens GN=KLHL28 PE... [more]
back to top