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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00066606-protein ID=TCONS_00066606-protein|Name=TCONS_00066606-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1025bp
GKRNKKHYKNFKFYYNNIRGMTSKLEQLTEIIQDNVKPTMFCIVETHLQQ
DEAVKEIEEKFPEYKILRNDRTKADTGGGILIAVRKEIGKNMIEVDRQAD
EEETLWVKIDNKQTKIRIGVIYAPQESRTDLEQLKNMYNRIQQQVKVAKR
QGEELLILGDFNAKIYEQVTKGGKLLKELVKDNEIYIVNDDAEGKWTRIQ
GDEKSTIDYVMTNNYRKGGVKMTIDETKALTPYYIKDKEAKYTDHCAMIG
TVNWKTTASVEKKKKYISNITVKTKAAYKIVTNIEKLTSIATEKSLPLND
RYEKWEDEIIKMSKKCFTKCKVNKYTKTSPKRRKLMKKRRDLIKIEKGNE
TNENSIEKTRIKLLNQHIESETKEERMKTTRKKVEQIEKAGGVNSPDFWK
IIKPTKDKTQKKTSMIDERGEVKEDQEEIKNVYKQWYQNLLMASPATTEE
ERRSEERVNECFEMIKREATKCEIREISREELDKVIRNLSTKKAEDFSEI
KNEFIKYGGEKLKTSLLKLLNEILLKAEIPDRWKHMIIKSIYKNKGKRNE
MKNQRGIFLTSIVSKIFERILLNRNKTTIEENMSPFQCGGRSGRGICDHL
FTMRALIDDAKYYNKNLYLFYGDLEKCFDKLWLRDCIVEAWKAGVPANEA
MIIFEMNKEAKIVVDTPHGRTAEITTKEIVRQGTIWGPTLCAVSTEKVNK
VGEKVSTLYSNLNVESLTYVDDICGAGGRETVSKTIDNCARMEEKKRMTF
NETKSNYQILEFGEKRDRVEIKKRVKKGPIIKTDKYKYLGDYVNNKGTYK
DTIQNKEKKIYGITKAIIKDADCTGESYGKVVNKLYLTKALPYVTSNMET
WSAISKSEMASIEKMQKDMLLRIYGMPKTTPYEPFLSELGIWPIRHYINY
KKLLLLHNLINSPDERVAAKILKAQMENEIRNCWYSELKERCDQYEIDTT
SVKDISKNEWKKRIRKAITKSIENEEWTKRTKSRNSKGFERKKYLDETDK
ATMRNILSMKVNMIDVKMNYKGKYR Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 131..151 |
| None | No IPR available | COILS | Coil | Coil | coord: 370..390 |
| None | No IPR available | CDD | cd01650 | RT_nLTR_like | coord: 537..790
e-value: 1.02272E-28
score: 114.696 |
| IPR000477 | Reverse transcriptase domain | PFAM | PF00078 | RVT_1 | coord: 547..790
e-value: 2.3E-20
score: 72.9 |
| IPR005135 | Endonuclease/exonuclease/phosphatase | GENE3D | 3.60.10.10 | | coord: 5..254
e-value: 2.7E-19
score: 69.3 |
| IPR005135 | Endonuclease/exonuclease/phosphatase | PFAM | PF14529 | Exo_endo_phos_2 | coord: 117..214
e-value: 9.9E-8
score: 31.8 |
| IPR005135 | Endonuclease/exonuclease/phosphatase | SUPERFAMILY | 56219 | DNase I-like | coord: 10..251 |
Blast
The following BLAST results are available for this feature:
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