TCONS_00066636-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00066636-protein
Unique Name	TCONS_00066636-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	591

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00066636-protein ID=TCONS_00066636-protein|Name=TCONS_00066636-protein|organism=Clytia hemisphaerica|type=polypeptide|length=591bp
MKPIALFLVFLTCHDVLSSVSDQTSEVGLADIEGVIAGYGDFNSDQATDV
FVISKDWATVHVYLWNVRNQKFTKGDATVKSENIVNIVPADFNGDGDMDL
LISTESSKKTVISQVYFGNRKSLTKSDDLKIEAKDQPTVFDMNGDYLPDL
FGTDLNGNRTYWVYVPTENKNNAHFSTETQETGTDIAIPNSNGFVDATGD
LHPDLVVKSIAAEDKGVVFEIWKQNKKDMELAGTLLMFEDKNIEMVGQVS
FADIDNDETMDLIVPICLKKDCEHSKIYSHSLSMLNGKFITTWQLLLSNE
NSDWKFDPETFTKGKIPFMLNFGDFIMDGKIDAVAILQKKDDGTPFAVQL
VNQPCSPASHKCNGARSFRIAEIKTKGYPTSVSLMDVYENGALDFMVSYE
IKTQKKTIKGMQVLRNDYNSDAAFLKVAVLSGDKTSAKYGSNLAGATVII
QTTDTDDNALVRKATQLSQTAYFSLSLPYVVFGLGRSPNFVEKITVGVCQ
SDNPKIDRVRTWASIIPNSQVIVIPTPKDSPSDWVTRLLVTPSKILLQTA
GVLIGTCLLIAGLILILHIKEKKEDEREKRKEAHKFHFDAL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041679	XLOC_041679	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00066636	TCONS_00066636	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.130.10.130		coord: 15..220 e-value: 2.4E-13 score: 49.4
None	No IPR available	GENE3D	2.130.10.130		coord: 221..409 e-value: 8.5E-5 score: 21.1
None	No IPR available	PFAM	PF13517	VCBS	coord: 41..102 e-value: 5.0E-9 score: 36.5
None	No IPR available	SUPERFAMILY	69318	Integrin alpha N-terminal domain	coord: 39..398

Blast

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BLAST of TCONS_00066636-protein vs. Swiss-Prot (Human)
Match: TIP (T-cell immunomodulatory protein OS=Homo sapiens GN=ITFG1 PE=1 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 1.385e-99
Identity = 206/609 (33.83%), Postives = 324/609 (53.20%), Query Frame = 0

Query:   19 SVSDQTSEVGLADIEGVIAGYGDFNSDQATDVFVISKDWATVHVYLWNVRNQKFTKGDATVKSEN----IVNIVPADFNGDGDMDLLIS---TESSKKTVISQVYFGNRKSLTKSDD--LKIEAKDQPTVFDMNGDYLPDLFGTD---------LNGNRTYWVYVPTENKNNAHFSTETQETGTDIAIPNSNGFVDATGDLHPDLVVKSIAAEDKGVVFEIWKQNKKDMELAGTLLMFEDKNIEMVGQVSFADIDNDETMDLIVPICLKKDCEHSKIYSHSLSMLNGKFITTWQLLL---SNENSDWKFDP----ETFTKGKIPFMLNFGDFIMDGKIDAVAILQKKDDGTPFAVQLVNQPCSPASHKCNGARS-----FRIAEIKTKGYPTSVSLMDVYENGALDFMVSYEIKTQKKTIKGMQVLRNDYNSDAAFLKVAVLSG------DKTSAKYGSNLAGATVIIQTTDTDDNALVRKATQLSQTAYFSLSLPYVVFGLGRSPNFVEKITVGVCQSDNPKIDRVRTWASIIPNSQVIVIPTPKDSPSDWVTRLLVTPSKILLQTAGVLIGTCLLIAGLILILHIKEKKEDEREKRKEAHKFHFDAL 591
            ++ + T+E+  A+  G +A +GD NSD+ TD+FV+ ++   + V+L + +N  + K    V  +N    I ++VP D++GD  MD+L++      +K  + + +++G  ++L  ++   L    +D+P + D NGD +PD+FG           L GN ++   + T +K               + IP+S+ F+D T D   DL + ++ A      FEIW+    D   + + ++ + +N+ +VGQ +FAD D D  MD ++P C  K+C+ S IY      L    +  W  +L   SN+ + W F P    +  T+  IP  L+ GD+ MDG  DA+ IL+        A  L N PC+ AS  C  AR      + + ++         +  D+YE+G LD +V    K   K    +  L+N++ +DA F+KV VLSG       +    +G N  G  ++  T D +       A QLSQ+A+ +L LPY V GLGRS NF++ + VG+ +    K  R + W +IIPNSQ+IVIP P + P  W  +L +TPS I+L TA  LIG C+ I  +I ILH +EKK D+REKR+EAH+FHFDA+
Sbjct:   33 ALHNVTAELFGAEAWGTLAAFGDLNSDKQTDLFVL-RERNDLIVFLAD-QNAPYFKPKVKVSFKNHSALITSVVPGDYDGDSQMDVLLTYLPKNYAKSELGAVIFWGQNQTLDPNNMTILNRTFQDEPLIMDFNGDLIPDIFGITNESNQPQILLGGNLSWHPALTTTSK---------------MRIPHSHAFIDLTEDFTADLFLTTLNATTSTFQFEIWE--NLDGNFSVSTILEKPQNMMVVGQSAFADFDGDGHMDHLLPGCEDKNCQKSTIY------LVRSGMKQWVPVLQDFSNKGTLWGFVPFVDEQQPTEIPIPITLHIGDYNMDGYPDALVILKNTSGSNQQAFLLENVPCNNAS--CEEARRMFKVYWELTDLNQIKDAMVATFFDIYEDGILDIVVLS--KGYTKNDFAIHTLKNNFEADAYFVKVIVLSGLCSNDCPRKITPFGVNQPGPYIMYTTVDANGYLKNGSAGQLSQSAHLALQLPYNVLGLGRSANFLDHLYVGIPRPSGEKSIRKQEWTAIIPNSQLIVIPYPHNVPRSWSAKLYLTPSNIVLLTAIALIGVCVFILAIIGILHWQEKKADDREKRQEAHRFHFDAM 612

The following BLAST results are available for this feature:

BLAST of TCONS_00066636-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00066636-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TIP	1.385e-99	33.83	T-cell immunomodulatory protein OS=Homo sapiens GN...	[more]

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TCONS_00066636-protein (polypeptide) - C. hemisphaerica