TCONS_00066637-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066637-protein
Unique NameTCONS_00066637-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length687

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066637-protein ID=TCONS_00066637-protein|Name=TCONS_00066637-protein|organism=Clytia hemisphaerica|type=polypeptide|length=687bp
CFRTENFTLVFIKSKGKMKTILLINALFLVNICHGVTYTYPGKGFTKFPI
LKSSQTTKISFEFQTSSTREEINILYVDDVENGGKSGDYLRVTLERGRLN
VHWDVSNGNYRDGDTKVIGHNLDDNIKHYVVIESYNGKDFLVRVDGGDVQ
SKSFSKAVRFNSEVYLGGCHPDPTKRTLQRDPYFCFQNGFIGCISNLRWS
TERGEPEQIVHPIESDNVAKGCTNRCLTDPSFSCSNRGRCLNQYIKTGCD
CRGTGFTGTTCQKPKQAVTFFGEQYVTWVPQTSMNSLVTDIFVRFKSNQP
SGIILFITGQSTSEFMLLELHKGTLILKTKINGYDEKVFKIPKSMNEKAS
NWRMVSFSRMGASTTISMDDGLYEYTNSVKRLENKVVQVKFIINKIYFGG
VDKLQDGDFALRKSDSKINFIGCLQNIDINQFELIGKITNSSSINDKSIT
LNGGALQKGACKTLPDVGNGLIPTPLVEEFITPKPPTTVSWNRHNNSLSN
RLNYVQNDEKDSKSMLWIIVGSCISFLVLTIAVVFVVRHVMKKRQERHRQ
YRDHYLRQTAMRIEQEDLLPTEQKCIREEIAKRKLQTFSPLRKDFYVSSS
SHAGSLPRSVHHEPIYQSHEVFHHAHPCLGKNYAVPSIQEQPGQNCPSPV
SSHYGISRKCSHSSSVRYQTPNVKPAESIKSFSSQQS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041680XLOC_041680Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066637TCONS_00066637Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001791Laminin_G
IPR000742EGF-like_dom
IPR013320ConA-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001791Laminin G domainSMARTSM00282LamG_3coord: 287..432
e-value: 2.1E-12
score: 57.2
coord: 55..202
e-value: 1.3E-13
score: 61.2
IPR001791Laminin G domainPFAMPF02210Laminin_G_2coord: 76..199
e-value: 1.5E-13
score: 51.3
coord: 295..431
e-value: 1.7E-13
score: 51.2
IPR001791Laminin G domainPROSITEPS50025LAM_G_DOMAINcoord: 35..222
score: 26.331
IPR001791Laminin G domainPROSITEPS50025LAM_G_DOMAINcoord: 265..461
score: 22.854
NoneNo IPR availableGENE3D1.20.5.900coord: 513..560
e-value: 3.3E-5
score: 23.2
NoneNo IPR availableGENE3D2.60.120.200coord: 255..447
e-value: 2.6E-23
score: 82.1
NoneNo IPR availableGENE3D2.10.25.10coord: 228..254
e-value: 0.0019
score: 17.8
NoneNo IPR availableGENE3D2.60.120.200coord: 32..227
e-value: 3.2E-23
score: 82.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 663..687
NoneNo IPR availableCDDcd00110LamGcoord: 267..430
e-value: 1.40046E-17
score: 79.3844
NoneNo IPR availableCDDcd00110LamGcoord: 37..199
e-value: 1.95675E-15
score: 73.2212
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 223..262
score: 9.399
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 33..226
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 234..430

Blast
BLAST of TCONS_00066637-protein vs. Swiss-Prot (Human)
Match: NRX1A (Neurexin-1 OS=Homo sapiens GN=NRXN1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.664e-19
Identity = 92/424 (21.70%), Postives = 177/424 (41.75%), Query Frame = 0
Query:   36 VTYTYPGKGFTKFPILKSSQTTKISFEFQTSSTREEINILYVDDVENGGKSG--------DYLRVTLERGRLNVHWDVSNGNYRDGDTKVIGHNLDDNIKHYVVIESYNGKDFLVRVDG--GDVQSKSFSKAVRFNSEVYLGGCHPDPTKRTLQRDPYFCFQN-GFIGCISNLRWSTERGEPEQIVHPIESDNVAKGCTNR----CLTDPSFSCSNRGRCLNQYIKTGCDCRGTGFTGTTCQKPKQAVTFFGEQYVTWVPQTSMNSLVTDIFVRFKSNQPSGIILFITGQSTSEFMLLELHKGTLILKTKIN--GYDEKVFKIPKSM----NEKASNWRMVSFSRMGASTTISMDDGLY---EYTNSVKRLENKVVQVKFIINKIYFGGVDKLQDGDFALRKSDSKINFIGCLQNIDINQFELI 435
            +T+  P + F   P   + +T  ISF+F+T  T     IL+        K          D+  + +  G L +  D+ +G  +    K +   ++D   ++V  +  +G+   + V+       +   S+ +  + E+YLGG   +        + +    N G++GCI +L    +  +  Q+     +  V   C+      CL++P   C N G C + + +  CDC GTG+ G +C++    +++ G  ++       M++   D+ +RF+S +  GI++  T + +++ + LEL  G + L   ++    +    K P+++    N   + W  V   R G S  +++DD      +      RLE   ++   I  + Y   V                 NFIG LQ++  N    I
Sbjct:  482 ITFETP-ESFISLPKWNAKKTGSISFDFRT--TEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIK---IKALLKKVNDGEWYHVDFQR-DGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSKETAKPCLSNP---CKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIITERRYLSSVPS---------------NFIGHLQSLTFNGMAYI 880          

HSP 2 Score: 88.1965 bits (217), Expect = 6.816e-18
Identity = 80/333 (24.02%), Postives = 150/333 (45.05%), Query Frame = 0
Query:   45 FTKFPILKSSQTTKISFEFQTSSTREEINILYVDDVENGGKSGDYLRVTLERGRLNVHWDVSNG-NYRDGDTKVIGHNLDDNIKHYVVIESYNGKDFLVRVDGG-DVQSKSFSKAVRFNSEVYLGGCHPDPTKRTLQRDPYFCF-QNGFIGCISNLRWSTERGEPEQIVHPIESDN-VAKGCTNRCLTDPSFSCSNRGRCLNQYIKTGCDCRGTGFTGTTCQKPKQAVTFF---GEQYVTWVPQTSMNSLVTDIFVRFKSNQPSGIILFITGQS-TSEFMLLELHKGTLILKTKINGYDEKVFKIPKSMNEKASNWRMVSFSRMGASTTISMD 369
            +     L++  +  + F+F+T+S   +  ILY     N G   D++ V L +G L+  +D+ NG N   G +      L+DN  H V+I         V++D     Q  + ++ +   S++Y+GG      K T +  P     + GF GC++++  +     P+ I   +  +  + +GC     T    SCSN+G CL Q+    CDC  T F+G  C  P     F    G+    W P    ++    + + F + Q   +++ +   S   +++ L +H+G + +K  +   D  + +    +N+    + +V F+R G + T+ +D
Sbjct:  915 YVALATLQAYTSMHLFFQFKTTSL--DGLILY-----NSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSN---KPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGV----AKETYKSLPKLVHAKEGFQGCLASVDLNGRL--PDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIIND--GKYHVVRFTRSGGNATLQVD 1229          
The following BLAST results are available for this feature:
BLAST of TCONS_00066637-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NRX1A1.664e-1921.70Neurexin-1 OS=Homo sapiens GN=NRXN1 PE=2 SV=1[more]
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