TCONS_00066672-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066672-protein
Unique NameTCONS_00066672-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length245

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066672-protein ID=TCONS_00066672-protein|Name=TCONS_00066672-protein|organism=Clytia hemisphaerica|type=polypeptide|length=245bp
MEMPRKHENEGTSNFGDGEEFDDSGRTYFVERINIPRDGEGDKAYAFSFK
RLWAFTGPGFLMSIAYLDPGNIESDLQQGAVARYQLLWVLLASTCVGLLM
QFLSARLGTVTGLHLAEVCHEKYPKIPRLIVWVMVEIAIIGSDMQEVIGT
AIGFHLLSDGRIPIWGGVLITICDTFVFLFLDKYGLRKLELFFATLITIM
AVTFGYEVSKFKCMILILNIKSICLYLGGPWIIRKTDNKYKLLYN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041706XLOC_041706Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066672TCONS_00066672Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001046NRAMP_fam
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001046NRAMP familyPRINTSPR00447NATRESASSCMPcoord: 161..180
score: 71.0
coord: 131..157
score: 66.37
coord: 186..207
score: 67.82
IPR001046NRAMP familyPFAMPF01566Nrampcoord: 72..210
e-value: 1.5E-45
score: 155.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Blast
[Close]
BLAST of TCONS_00066672-protein vs. Swiss-Prot (Human)
Match: NRAM1 (Natural resistance-associated macrophage protein 1 OS=Homo sapiens GN=SLC11A1 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.438e-82
Identity = 127/182 (69.78%), Postives = 146/182 (80.22%), Query Frame = 0 
Query:   26 RTYFVERINIPRDGEGDKAYAFSFKRLWAFTGPGFLMSIAYLDPGNIESDLQQGAVARYQLLWVLLASTCVGLLMQFLSARLGTVTGLHLAEVCHEKYPKIPRLIVWVMVEIAIIGSDMQEVIGTAIGFHLLSDGRIPIWGGVLITICDTFVFLFLDKYGLRKLELFFATLITIMAVTFGYE 207
             TY  E+I IP    G     FS ++LWAFTGPGFLMSIA+LDPGNIESDLQ GAVA ++LLWVLL +T +GLL Q L+ARLG VTG  L EVCH  YPK+PR ++W+ +E+AI+GSDMQEVIGTAI F+LLS GRIP+WGGVLITI DTF FLFLD YGLRKLE FF  LITIMA+TFGYE
Sbjct:   36 ETYLSEKIPIPDTKPG----TFSLRKLWAFTGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKDLGEVCHLYYPKVPRTVLWLTIELAIVGSDMQEVIGTAIAFNLLSAGRIPLWGGVLITIVDTFFFLFLDNYGLRKLEAFFGLLITIMALTFGYE 213
The following BLAST results are available for this feature:
BLAST of TCONS_00066672-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NRAM11.438e-8269.78Natural resistance-associated macrophage protein 1... [more]
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