TCONS_00066703-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066703-protein
Unique NameTCONS_00066703-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length352

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066703-protein ID=TCONS_00066703-protein|Name=TCONS_00066703-protein|organism=Clytia hemisphaerica|type=polypeptide|length=352bp
QVEDEYQKAKDIFIDMTSELYEELPALYDSRIGFYVSCFQSIFTLEEVFH
REAAELNHNLNDLMDQLIADFSAGTFSTRKPFSAGIESSLNVSEKEKDDT
KLSSGSLAQFYDVAVPDAEEVEEHNSSTETPHQQDTPPTQDETDALQPPS
HYDAPNSEDIDSTPPPAVPSQPTRPAPTPPLTSSPARPSQPELFTVGKEE
IDGVVEHEHGTSKEEQEPDEVDPLENSSSTSQAQEENSPEENPSASNTVE
GSLPADSNSVSTRADVLAYRNVPSPENPCNLVVPNAVYKAIATHKYSPED
EDELSFEKGEIIHVIPYDDPEEQDDGWLMGVMDSNGFVGVFPENFSKRLS
PS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041709XLOC_041709Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066703TCONS_00066703Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR027267AH/BAR-dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainSMARTSM00326SH3_2coord: 288..350
e-value: 1.8E-13
score: 60.8
IPR001452SH3 domainPFAMPF14604SH3_9coord: 292..345
e-value: 1.3E-9
score: 37.6
IPR001452SH3 domainPROSITEPS50002SH3coord: 285..351
score: 12.991
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 284..347
NoneNo IPR availableGENE3D1.20.1270.60coord: 1..70
e-value: 9.7E-13
score: 47.7
NoneNo IPR availableGENE3D2.30.30.40coord: 202..352
e-value: 4.2E-16
score: 58.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..260
NoneNo IPR availableCDDcd11790SH3_Amphiphysincoord: 288..349
e-value: 7.85829E-32
score: 113.962
IPR027267Arfaptin homology (AH) domain/BAR domainSUPERFAMILY103657BAR/IMD domain-likecoord: 2..64

Blast
[Close]
BLAST of TCONS_00066703-protein vs. Swiss-Prot (Human)
Match: BIN2 (Bridging integrator 2 OS=Homo sapiens GN=BIN2 PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 3.489e-18
Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = 0 
Query:    1 QVEDEYQKAKDIFIDMTSELYEELPALYDSRIGFYVSCFQSIFTLEEVFHREAAELNHNLNDLMDQLIADFSAGTFSTR 79
            + E+E+ KA+ +F D+  EL EELP LY+SRIG YV+ FQ+I  L +VF+RE ++LNHNL ++M +L    S   F  +
Sbjct:  172 KAEEEFNKAQTVFEDLNQELLEELPILYNSRIGCYVTIFQNISNLRDVFYREMSKLNHNLYEVMSKLEKQHSNKVFVVK 250
The following BLAST results are available for this feature:
BLAST of TCONS_00066703-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BIN23.489e-1846.84Bridging integrator 2 OS=Homo sapiens GN=BIN2 PE=1... [more]
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