TCONS_00066704-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066704-protein
Unique NameTCONS_00066704-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length177

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066704-protein ID=TCONS_00066704-protein|Name=TCONS_00066704-protein|organism=Clytia hemisphaerica|type=polypeptide|length=177bp
EENKNNFKIATLLKNEMSEKNDGKSERGLLARTATYTSKKARRAQTKLKQ
RVGKGDETKDEVFDEFVFNFNKQQASATRLHAELKNYMRCITAMQVAHTN
FGEAVKEVYESDWSCRPKMVDYFKEYDSNWTKLRHRVSEEVLEPLTSYLK
PFPDVKTKISKRARKLVDYDHSRHAVD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041710XLOC_041710Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066704TCONS_00066704Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003005Amphiphysin
IPR004148BAR_dom
IPR027267AH/BAR-dom
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003005AmphiphysinPRINTSPR01251AMPHIPHYSINcoord: 107..119
score: 52.75
coord: 47..64
score: 61.11
coord: 142..156
score: 47.94
coord: 75..85
score: 39.39
coord: 164..175
score: 75.0
IPR004148BAR domainPFAMPF03114BARcoord: 39..176
e-value: 1.4E-24
score: 86.9
IPR004148BAR domainPROSITEPS51021BARcoord: 48..177
score: 19.822
NoneNo IPR availableGENE3D1.20.1270.60coord: 44..177
e-value: 2.9E-26
score: 92.0
IPR027267Arfaptin homology (AH) domain/BAR domainSUPERFAMILY103657BAR/IMD domain-likecoord: 50..176

Blast
[Close]
BLAST of TCONS_00066704-protein vs. Swiss-Prot (Human)
Match: AMPH (Amphiphysin OS=Homo sapiens GN=AMPH PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.899e-33
Identity = 63/147 (42.86%), Postives = 89/147 (60.54%), Query Frame = 0 
Query:   28 GLLARTATYTSKKARRAQTKLKQRVGKGDETKDEVFDEFVFNFNKQQASATRLHAELKNYMRCITAMQVAHTNFGEAVKEVYESDWSCRPKMVDYFKEYDSNWTKLRHRVSEEVLEPLTSYLKPFPDVKTKISKRARKLVDYDHSRH 174
            G+ A+      K+  RAQ K+ Q++GK DETKDE F+E+V NF +Q+A  TRL  EL+ Y+  I  MQ A     E++ EVYE DW  R  +    ++ D  W     ++ +  L  L +YL  FPD+K +I+KR+RKLVDYD +RH
Sbjct:    7 GIFAKN---VQKRLNRAQEKVLQKLGKADETKDEQFEEYVQNFKRQEAEGTRLQRELRGYLAAIKGMQEASMKLTESLHEVYEPDWYGREDVKMVGEKCDVLWEDFHQKLVDGSLLTLDTYLGQFPDIKNRIAKRSRKLVDYDSARH 150
The following BLAST results are available for this feature:
BLAST of TCONS_00066704-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AMPH3.899e-3342.86Amphiphysin OS=Homo sapiens GN=AMPH PE=1 SV=1[more]
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