TCONS_00066730-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00066730-protein
Unique Name	TCONS_00066730-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1574

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00066730-protein ID=TCONS_00066730-protein|Name=TCONS_00066730-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1574bp
MASVKVAVRVRPLNKREINMNSKCIIQMEGKRTSILNLKSNTGTYRSNET
EEVERDRVKDFFFDYSYWSMDPNSSKFASQAQVYSDLGNDVVNSAKEGYN
ACIFAYGQTGSGKTHTMMGQQGNEGLIPRICENLFQQMHEKENDGISFRA
EVSYLEIYNERVRDLLRAHQPKSGQPSHTLKVREHPQGGPYVQGLTKHMV
TDYNAIEAIMKQGNELRTTASTNMNDTSSRSHAIFTVNFTQAKFMHDMPS
ETTSKINLVDLAGSERADSTGATGVRLKEGANINKSLVTLGSVISSLAEA
STNTKKKNVFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYAETLS
TLRYANRAKNIINKPTVNEDSNVKLIRXSFHFTYIFSFQDSNVKLIRDLR
AEIEKLKFIIGDDVLSDAEKIAARKLHENEERLGVLTDKWKDRWKEMQKI
MQERELAFQHSLDAGIRMESELPHLIALEDDLLSTGILLYPLKDGKTFVG
TKNSKTKPDIVIDGTDILNEHCVIENNNGFVLLNPFPDAVCLVNGTHAEK
KIRLKQGDVVTFGTTIFRFNHPKEAEELREKRKSVGPNFSELTTVTKYRS
ESDLQKIRSFEPRDNKREEDLSRQLDEARLLLEKQKQEEERRMEETRNEF
ARQIREESQRLQETRGELEQQRRARLNEVQTPQQIKKHIEELERKHTEAE
KKRQQRQKELSESINAKKESITLQEKKLKELEQKCSDVKSNDTTRIENEV
HVFMKNRSELMTTMSNDIQKIVTDMRAKSGDSNIDQIRSVWETETNRIET
QEKLCSTLRNELESLNTTLENMGNVTDEDKMNIEQQKSDLERTLKNADVS
LEEALNNKAESLAKYGQDYKNRYEFICWEREKVTGQTHLKKEKINVEKAQ
HEECFLEAEGVLDEVKTKYYEAVTLENEMISQERLKVDQRKKESIKQSIL
DQRECNEKVQQYRMLLTKRQEKINSKRIEMESIRNDLTEAMKGKTDDSRK
KADRLRMELNDKIEDVHELEKNHDIMKSEEERVIQNMLSELNDKKKRHEI
ETETSENILKEFEQVSREKVLLLQEEVDMAEKSVIQCRSVIERDEGKLKD
IDKLHEAETAKLDTDLLYVGYLIDKEFPKDSDSEELAGVLESKQTLEVLN
ENYKQKIESIKAETDSTWKPLVESREEAQVVLEDLVRTRGIAEVTLTELK
EQFLQERQTELTEIEQLKERLGDLIEEQDLSRSSLEDEVLKDETKDEQVS
FNRRLDEEKQKLEDEMYEKILIMEKAMQSEIDQLKERELDLITCMQSDRE
KIVEEKRALEQSKESATEGYQKIKSQIEDREKELEATREVATREIEELKT
KLSYANKEIYTLQEKLEKYVSLTSLDLDKRNSEDDDLSDTEVKQLLYRVN
ESSGIEEEDDEIARFRVSPPPTPINRFLQSVSIYRKNQIKVTLPRFILRG
FGRASYHVFEVKLSVGDDCWSVYRRYRRFRELHRAMLQQYSIVANIEFPS
RRYFGNKAERFVRVRRSQLEAYLTALLAIVSNMNGSCIYAVTDRQLTKQD
LGNFHPFFKQGVYEYTKNETDFSP

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041731	XLOC_041731	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00066730	TCONS_00066730	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001752	Kinesin_motor_dom
IPR001683	Phox
IPR000253	FHA_dom
IPR019821	Kinesin_motor_CS
IPR008984	SMAD_FHA_domain
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003777	microtubule motor activity
GO:0008017	microtubule binding
GO:0035091	phosphatidylinositol binding
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007018	microtubule-based movement

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007018	microtubule-based movement
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003777	microtubule motor activity
molecular_function	GO:0035091	phosphatidylinositol binding
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1143..1163
None	No IPR available	COILS	Coil	Coil	coord: 618..674
None	No IPR available	COILS	Coil	Coil	coord: 714..741
None	No IPR available	COILS	Coil	Coil	coord: 685..709
None	No IPR available	COILS	Coil	Coil	coord: 1200..1227
None	No IPR available	COILS	Coil	Coil	coord: 1241..1261
None	No IPR available	COILS	Coil	Coil	coord: 1002..1058
None	No IPR available	COILS	Coil	Coil	coord: 1267..1287
None	No IPR available	COILS	Coil	Coil	coord: 798..825
None	No IPR available	COILS	Coil	Coil	coord: 830..857
None	No IPR available	COILS	Coil	Coil	coord: 1313..1365
None	No IPR available	GENE3D	2.60.200.20		coord: 462..578 e-value: 4.6E-26 score: 90.5
None	No IPR available	CDD	cd00060	FHA	coord: 472..569 e-value: 2.09504E-11 score: 61.6334
None	No IPR available	CDD	cd01365	KISc_KIF1A_KIF1B	coord: 2..368 e-value: 0.0 score: 558.892
IPR001752	Kinesin motor domain	PRINTS	PR00380	KINESINHEAVY	coord: 311..332 score: 67.39 coord: 98..119 score: 76.06 coord: 255..273 score: 62.15 coord: 222..239 score: 57.27
IPR001752	Kinesin motor domain	SMART	SM00129	kinesin_4	coord: 1..369 e-value: 1.7E-168 score: 575.8
IPR001752	Kinesin motor domain	GENE3D	3.40.850.10		coord: 1..373 e-value: 4.1E-137 score: 456.0
IPR001752	Kinesin motor domain	PFAM	PF00225	Kinesin	coord: 9..361 e-value: 2.5E-113 score: 378.3
IPR001752	Kinesin motor domain	PROSITE	PS50067	KINESIN_MOTOR_2	coord: 3..361 score: 120.905
IPR001683	Phox homologous domain	GENE3D	3.30.1520.10		coord: 1435..1566 e-value: 1.5E-22 score: 79.3
IPR001683	Phox homologous domain	PFAM	PF00787	PX	coord: 1450..1529 e-value: 2.4E-13 score: 50.0
IPR001683	Phox homologous domain	PROSITE	PS50195	PX	coord: 1437..1574 score: 14.117
IPR001683	Phox homologous domain	SUPERFAMILY	64268	PX domain	coord: 1436..1530
IPR000253	Forkhead-associated (FHA) domain	PFAM	PF00498	FHA	coord: 506..563 e-value: 3.9E-5 score: 23.8
IPR019821	Kinesin motor domain, conserved site	PROSITE	PS00411	KINESIN_MOTOR_1	coord: 254..265
IPR008984	SMAD/FHA domain	SUPERFAMILY	49879	SMAD/FHA domain	coord: 470..570
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 3..370

Blast

[Close]

BLAST of TCONS_00066730-protein vs. Swiss-Prot (Human)
Match: KI16B (Kinesin-like protein KIF16B OS=Homo sapiens GN=KIF16B PE=1 SV=2)

HSP 1 Score: 683.33 bits (1762), Expect = 0.000e+0
Identity = 376/715 (52.59%), Postives = 479/715 (66.99%), Query Frame = 0

Query:    1 MASVKVAVRVRPLNKREINMNSKCIIQMEGKRTSILNLKSNTGTYRSNETEEVERDRVKDFFFDYSYWSMDPNSSKFASQAQVYSDLGNDVVNSAKEGYNACIFAYGQTGSGKTHTMMGQQGNEGLIPRICENLFQQMHEKEN-DGISFRAEVSYLEIYNERVRDLLRAHQPKSGQPSHTLKVREHPQGGPYVQGLTKHMVTDYNAIEAIMKQGNELRTTASTNMNDTSSRSHAIFTVNFTQAKFMHDMPSETTSKINLVDLAGSERADSTGATGVRLKEGANINKSLVTLGSVISSLAE-----ASTNTKKKNVFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYAETLSTLRYANRAKNIINKPTVNEDSNVKLIRXSFHFTYIFSFQDSNVKLIRDLRAEIEKLKFII--GDDV-LSDAEKIAA--RKLHENEERLGVLTDKWKDRWKEMQKIMQERELAFQHSLDAGIRMESELPHLIALEDDLLSTGILLYPLKDGKTFVGTKNSKTKPDIVIDGTDILNEHCVIENNNGFVLLNPFPDAVCLVNGTHAEKKIRLKQGDVVTFG-TTIFRFNHPKEAEELREKRKSVGPNFSELTTVTKYRSESDLQKIRSFEPRDNKREEDLSRQLDEARLLLEKQKQEEERRMEETRNEFARQIREESQRLQETRGELEQQRRARLNEVQTPQ-QIKKHIEELERKHTEAEKK 702
            MASVKVAVRVRP+N+RE ++ +K IIQME  +T+I NLK   G      T +  R+R K F +D+S++S D  S  + SQ  V+  LG DVV SA EGYNAC+FAYGQTGSGK++TMMG  G+ GLIPRICE LF +++E    D  SFR EVSYLEIYNERVRDLLR    K+      L+VREHP+ GPYV+ L+KH+V +Y  +E +M  GN  RTTA+T MND SSRSHAIFT+ FTQAKF  +MP ET SKI+LVDLAGSERAD+TGATGVRLKEG NINKSLVTLG+VIS+LA+     A+T  KKK VF+PYRDSVLTWLLKDSLGGNSKTIMIA ISPADVNY ETLSTLRYANRAKNIINKPT+NED                    +NVKLIR+LRAEI +LK ++  G+ + L D+    +   KL +NE R+  LT +W ++W E Q I++E+ LA +     G+ ++SELPHLI ++DDLLSTGI+LY LK+G+T+VG  ++ T+ DIV+ G D+ +EHC+ EN  G V L P   + C VNG    +   L QG V+  G T +FRFNHPKEA +LREKRKS   +   L+     +S  +L  +  + P       +  RQ  E     E +K E +R++ E   E  +  + E +R+Q+   E+E QR+    E +  Q QI+K  E L+R+    E K
Sbjct:    1 MASVKVAVRVRPMNRREKDLEAKFIIQMEKSKTTITNLKIPEGG-----TGDSGRERTKTFTYDFSFYSADTKSPDYVSQEMVFKTLGTDVVKSAFEGYNACVFAYGQTGSGKSYTMMGNSGDSGLIPRICEGLFSRINETTRWDEASFRTEVSYLEIYNERVRDLLRRKSSKT----FNLRVREHPKEGPYVEDLSKHLVQNYGDVEELMDAGNINRTTAATGMNDVSSRSHAIFTIKFTQAKFDSEMPCETVSKIHLVDLAGSERADATGATGVRLKEGGNINKSLVTLGNVISALADLSQDAANTLAKKKQVFVPYRDSVLTWLLKDSLGGNSKTIMIATISPADVNYGETLSTLRYANRAKNIINKPTINED--------------------ANVKLIRELRAEIARLKTLLAQGNQIALLDSPTALSMEEKLQQNEARVQELTKEWTNKWNETQNILKEQTLALRKE-GIGVVLDSELPHLIGIDDDLLSTGIILYHLKEGQTYVGRDDASTEQDIVLHGLDLESEHCIFENIGGTVTLIPLSGSQCSVNGVQIVEATHLNQGAVILLGRTNMFRFNHPKEAAKLREKRKSGLLSSFSLSMTDLSKSRENLSAVMLYNPG-----LEFERQQRE-----ELEKLESKRKLIEEMEEKQKSDKAELERMQQ---EVETQRK----ETEIVQLQIRKQEESLKRRSFHIENK 668

HSP 2 Score: 124.405 bits (311), Expect = 2.341e-28
Identity = 54/136 (39.71%), Postives = 90/136 (66.18%), Query Frame = 0

Query: 1436 KNQIKVTLPRFILRGFGRASYHVFEVKLSVGDDCWSVYRRYRRFRELHRAMLQQYSIVANIEFPSRRYFGNKAERFVRVRRSQLEAYLTALLAIVSNMNGSCIYA-VTDRQLTKQDLGNFHPFFKQGVYEYTKNET 1570
            K+ IK+++PR++L G G+ ++  FEVK++V D+ W+V+RRY RFRE+H+ +  +Y+ +A +EFP ++ FGNK ER +  RRS LE YL    +++     S ++       L+K  +  F PFFK+GV++Y+ + T
Sbjct: 1181 KDPIKISIPRYVLCGQGKDAHFEFEVKITVLDETWTVFRRYSRFREMHKTLKLKYAELAALEFPPKKLFGNKDERVIAERRSHLEKYLRDFFSVMLQSATSPLHINKVGLTLSKHTICEFSPFFKKGVFDYSSHGT 1316

The following BLAST results are available for this feature:

BLAST of TCONS_00066730-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00066730-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KI16B	2.341e-28	52.59	Kinesin-like protein KIF16B OS=Homo sapiens GN=KIF...	[more]

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TCONS_00066730-protein (polypeptide) - C. hemisphaerica