TCONS_00066736-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066736-protein
Unique NameTCONS_00066736-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length175

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066736-protein ID=TCONS_00066736-protein|Name=TCONS_00066736-protein|organism=Clytia hemisphaerica|type=polypeptide|length=175bp
MSKTITINEKLEKAGEEKELGNGFFKEGNLRKAIKKYHIALMYIKDLEKP
SPFDKLAGIEPKKVTDSELHGIKSLRSVCYNNLSACLLKSEEYQKVIEYT
TKALEYDQSNIKSLYRRGQAHFHTKDFDKSEKDFLHIKSIDPKETCYNPF
MKKIEANKKVRTVNEKEMYRKMMDG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041733XLOC_041733Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066736TCONS_00066736Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 111..144
e-value: 0.068
score: 22.3
coord: 77..110
e-value: 0.025
score: 23.8
coord: 14..47
e-value: 39.0
score: 9.7
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 112..143
e-value: 0.0031
score: 17.5
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 14..47
score: 5.93
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 77..110
score: 8.113
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 111..144
score: 8.113
NoneNo IPR availableGENE3D1.10.150.160coord: 5..89
e-value: 3.3E-11
score: 42.6
NoneNo IPR availableGENE3D1.20.58.280coord: 121..172
e-value: 0.26
score: 11.0
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 90..120
e-value: 3.6E-11
score: 42.3
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 7..144
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 77..144
score: 13.673

Blast
[Close]
BLAST of TCONS_00066736-protein vs. Swiss-Prot (Human)
Match: TTC9C (Tetratricopeptide repeat protein 9C OS=Homo sapiens GN=TTC9C PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.125e-25
Identity = 56/171 (32.75%), Postives = 96/171 (56.14%), Query Frame = 0 
Query:    7 INEKLEKAGEEKELGNGFFKEGNLRKAIKKYHIALMYIKDLEK--PSPFDKLAGIEPKKVTDSELHGIKSLRSVCYNNLSACLLKSE--EYQKVIEYTTKALEYDQSNIKSLYRRGQAHFHTKDFDKSEKDFLHIKSIDPKETCYNPFMKKIEANKKVRTVNEKEMYRKMM 173
            + ++L++A   KE GN  ++EG  R A+ +YH AL+ ++ L+   PSP   L G +   +T  + + + + ++ CYNNL+ACLL+ E   Y++V EY+ K LE    N K+LYR G A FH +D+D++    L   +  PK+     +++  ++        EK++Y  M 
Sbjct:    1 MEKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNL-GPQGPALTPEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQLYLGMF 170
The following BLAST results are available for this feature:
BLAST of TCONS_00066736-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTC9C1.125e-2532.75Tetratricopeptide repeat protein 9C OS=Homo sapien... [more]
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