TCONS_00066783-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066783-protein
Unique NameTCONS_00066783-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length411

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066783-protein ID=TCONS_00066783-protein|Name=TCONS_00066783-protein|organism=Clytia hemisphaerica|type=polypeptide|length=411bp
LEVNFRYNKSTFQVNKKMTLDWPLHYEVVAKCSKSKGRASLMRLPHFTVE
TPIFMPVGTQGTMKGLTCDQLRELNCQIILANTYHLGMRPGEDVLNKAGR
LHKFMDWDRGMLTDSGGFQMVSLISLSEVTEEGVRFSSPYDGRDILLTPE
KSMQIQNAIGADIMMQLDDVVDVKVTGPRVEEAMHRSIRWLDRCIEGHQR
KEHQNLFPIIQGGLNLELRTKCIEAMVKRNMPGYAVGGLSGGEAKDDFWK
VVHHCTNLLPRDKPIYVMGVGYAIDLVVCSALGADMFDCVYPTRTARFGT
ALVPSGQLHLKTNQYADDFRPIDDQCTCLTCRKYTRAFIHSLVGKESVAC
YLLSIHNIKYQMNLMTTLRQSIIDDRLEDYIQQFFLKMFPNKDYPSWCIN
ALDAVNIQLVT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041762XLOC_041762Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066783TCONS_00066783Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002616tRNA_ribo_trans-like
IPR004803TGT
Vocabulary: Molecular Function
TermDefinition
GO:0016763transferase activity, transferring pentosyl groups
GO:0008479queuine tRNA-ribosyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006400tRNA modification
GO:0101030tRNA-guanine transglycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0101030 tRNA-guanine transglycosylation
biological_process GO:0006400 tRNA modification
molecular_function GO:0008479 queuine tRNA-ribosyltransferase activity
molecular_function GO:0016763 transferase activity, transferring pentosyl groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002616tRNA-guanine(15) transglycosylase-likePFAMPF01702TGTcoord: 151..384
e-value: 2.4E-88
score: 295.6
IPR002616tRNA-guanine(15) transglycosylase-likeGENE3D3.20.20.105coord: 11..393
e-value: 4.3E-158
score: 525.6
IPR002616tRNA-guanine(15) transglycosylase-likeTIGRFAMTIGR00449TIGR00449coord: 26..387
e-value: 1.6E-128
score: 426.6
IPR002616tRNA-guanine(15) transglycosylase-likeSUPERFAMILY51713tRNA-guanine transglycosylasecoord: 24..385
IPR004803tRNA-guanine transglycosylaseTIGRFAMTIGR00430TIGR00430coord: 27..388
e-value: 7.2E-134
score: 444.3
IPR004803tRNA-guanine transglycosylaseHAMAPMF_00168Q_tRNA_Tgtcoord: 24..387
score: 49.99

Blast
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BLAST of TCONS_00066783-protein vs. Swiss-Prot (Human)
Match: TGT (Queuine tRNA-ribosyltransferase catalytic subunit 1 OS=Homo sapiens GN=QTRT1 PE=1 SV=3)

HSP 1 Score: 509.22 bits (1310), Expect = 0.000e+0
Identity = 234/389 (60.15%), Postives = 301/389 (77.38%), Query Frame = 0 
Query:   23 PLHYEVVAKCSKSKGRASLMRLPHFTVETPIFMPVGTQGTMKGLTCDQLRELNCQIILANTYHLGMRPGEDVLNKAGRLHKFMDWDRGMLTDSGGFQMVSLISLSEVTEEGVRFSSPYDGRDILLTPEKSMQIQNAIGADIMMQLDDVVDVKVTGPRVEEAMHRSIRWLDRCIEGHQRKEHQNLFPIIQGGLNLELRTKCIEAMVKRNMPGYAVGGLSGGEAKDDFWKVVHHCTNLLPRDKPIYVMGVGYAIDLVVCSALGADMFDCVYPTRTARFGTALVPSGQLHLKTNQYADDFRPIDDQCTCLTCRKYTRAFIHSLVGKESVAC-YLLSIHNIKYQMNLMTTLRQSIIDDRLEDYIQQFFLKMFPNKDY-PSWCINALDAVNIQL 409
            P    +VA+CS+S+ RA  + LPH TV TP+FMPVGTQ TMKG+T +QL  L C+I L NTYHLG+RPG +++ KA  LH FM+W   +LTDSGGFQMVSL+SLSEVTEEGVRF SPYDG + LL+PEKS+QIQNA+G+DI+MQLDDVV   VTGPRVEEAM+RSIRWLDRCI  HQR + QNLF IIQGGL+ +LR  C+E M KR++PG+A+GGLSGGE+K  FW++V   T+ LP+DKP Y+MGVGYA DLVVC ALG DMFDCV+PTRTARFG+ALVP+G L L+   +  DF PID +CTC TC+K++RAF+H+L+  ++ A  + L++HNI YQ+ LM+ +R SI++ R  D+++ F   M+ +    P+W  +AL +V I L
Sbjct:   14 PRIMRLVAECSRSRARAGELWLPHGTVATPVFMPVGTQATMKGITTEQLDALGCRICLGNTYHLGLRPGPELIQKANGLHGFMNWPHNLLTDSGGFQMVSLVSLSEVTEEGVRFRSPYDGNETLLSPEKSVQIQNALGSDIIMQLDDVVSSTVTGPRVEEAMYRSIRWLDRCIAAHQRPDKQNLFAIIQGGLDADLRATCLEEMTKRDVPGFAIGGLSGGESKSQFWRMVALSTSRLPKDKPRYLMGVGYATDLVVCVALGCDMFDCVFPTRTARFGSALVPTGNLQLRKKVFEKDFGPIDPECTCPTCQKHSRAFLHALLHSDNTAALHHLTVHNIAYQLQLMSAVRTSIVEKRFPDFVRDFMGAMYGDPTLCPTWATDALASVGITL 402
The following BLAST results are available for this feature:
BLAST of TCONS_00066783-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TGT0.000e+060.15Queuine tRNA-ribosyltransferase catalytic subunit ... [more]
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