TCONS_00066783 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066783
Unique NameTCONS_00066783
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2587

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066783 ID=TCONS_00066783|Name=TCONS_00066783|organism=Clytia hemisphaerica|type=transcript|length=2587bp
TTAGAAGTCAATTTCAGATATAATAAATCAACATTCCAAGTAAATAAAAA
GATGACATTAGATTGGCCATTGCATTATGAAGTTGTTGCCAAATGCTCTA
AAAGTAAAGGACGAGCCTCACTGATGAGGCTACCTCATTTTACAGTTGAG
ACACCTATCTTTATGCCTGTTGGTACCCAAGGTACAATGAAAGGGTTGAC
CTGTGATCAGTTACGTGAACTTAATTGTCAAATCATCCTGGCCAATACTT
ATCACTTAGGAATGAGACCAGGTGAGGATGTATTGAATAAAGCAGGAAGG
TTACACAAATTCATGGACTGGGACAGGGGAATGCTCACGGACAGTGGAGG
ATTTCAAATGGTTTCTCTCATCTCTCTGTCAGAAGTCACTGAGGAAGGTG
TACGTTTTAGTTCGCCTTACGATGGTCGAGATATTCTTCTTACACCAGAA
AAATCTATGCAGATACAGAATGCTATTGGAGCTGATATCATGATGCAATT
AGATGACGTAGTCGATGTCAAAGTTACGGGACCGAGAGTAGAAGAAGCAA
TGCATCGCTCCATTCGATGGCTCGATCGGTGCATTGAAGGTCATCAACGG
AAAGAACATCAGAATTTATTCCCTATCATTCAAGGTGGATTGAATTTGGA
ACTGAGGACAAAATGTATCGAAGCCATGGTCAAACGCAACATGCCAGGTT
ACGCAGTTGGTGGTTTGAGCGGTGGTGAGGCCAAGGATGACTTTTGGAAA
GTCGTTCATCATTGCACTAATCTTTTACCGAGAGATAAACCTATCTATGT
TATGGGAGTTGGgtATGCGATAGATTTGGTTGTATGTTCTGCGTTAGGAG
CTGATATGTTTGATTGTGTCTACCCCACGCGTACTGCAagGTTCGGTACA
GCATTGGTGCCATCTGGTCAGCTGCATCTCAAAACAAACCAATATGCTGA
CGATTTCAGGCCCATTGACGACCAATGTACTTGTTTAACGTGTCGCAAAT
ATACAAGAGCTTTTATCCATAGTTTGGTTGGCAAGGAATCAGTTGCTTGT
TACCTTTTATCCATCCATAATATCAAGTATCAGATGAACCTTATGACCAC
GTTACGTCAAAGTATAATCGACGATCGATTGGAAGATTATATACAACAAT
TCTTCTTGAAAATGTTCCCTAATAAAGACTATCCTTCGTGGTGCATAAAC
GCTCTTGATGCTGTCAATATACAACTTGTCACGTGATACTTACATAAGAA
TGAATAGTATGGTGGGATGGTTTTATAGGTGGATGGATGAGCAGGTTTTA
TTTATTTGTCTCACATTCTTATACTTTATTGGCTACAAGAGTTAtatgtt
ttcaaaataatggTATCTTTGAAATTAAGCTTtcgttttttatgtttttt
tttattgtcacCAGTCTCTCTGACCAAAGGCAGTCACGTCGTATCAAGTA
CGACTTTAGGAAGACTGCTTAAgcctttttaaagctttttgtaaattatt
taCATCTGCCGTGAAGCCGACTTAAAAGATCTCCGTCAAACAGTTTGAGC
ATAATAGAAAAATCGTTTTAATTACGTTTGAAAGTTACTCATGTTGAGAA
TTTTCAtgtttgcttcatttttcatttttgttcaatctacaattgaaaaa
tttatatGGAATATCgataaaataactttttcatgaaGTTTTTTATATGG
GCGTTGAATGACATTGACTATGGCTGGAACCATgaAATGTTTATGCTCAT
TGGTGGTTCTGTTGATCCTTGTTGTTCAGAGTTTGGGTGCTCCACGACAC
CGTCACACACACAACGAAAAAGCATCGGCTAGAAGTTATATCGACATTGA
TGCATCGGACCCTTTCAAAGTTCCTAAGAACAGTCATTATATGGAAAATG
ATATTcctgaaaatttcgaaaaagaagaaCCAGAATTGAAAGCCAGTGTC
TCGGAAGGCGAAGAAAGTCCCGCCCCTCAAGAACAGGGCGGAGATGAATC
TGAACACGAATCAAACGGAGAGCAACCGCCAAGTGAACCTCAAGAAGAAG
AGGGCGCCGGGCGTGAAGGTCCAGACGCCAAAGAAGGTGCGTCAAAAGAA
TTGCCTCAGGAGCAACCTTCTCAGGGACAAAATGGAGGAGGTTTGAACGA
CTTACCGCCAGGGATAACGGAAAAGATTGACGAGATAGCAAAGAACCAAG
GAAACAGTGACGGAAAACCCattgaaattaatgaaaatgatttgaaagGA
ATGGTGAACAATGCTGGCGGTGCACCTCAGGCTGAGGGCGGTCCTCCTGC
TGGGGAAGGTGCAGCAGAAGGGGAGGAAAATTAGATAGAGTGTACTTCTC
GACCTGTTTTGAAAAGCAACGCTTTATGGATGTATACCTGACAATGGACC
ATATCGAAAACTTTTATTACGCACacctttttcttctattttgtaatttt
ctttcgTTTGACAATTTTaaatagttttgacattttcGACAATAATTCGA
AGCTAGCAAAGATAAATGTAGGAATCAAATAAACCATTAGTCGTTTTGGT
GTTTCGGGTCTTATTTGCATTTTTCTAGGACTTTCAC
Run BLAST on NCBI

protein sequence of TCONS_00066783-protein

>TCONS_00066783-protein ID=TCONS_00066783-protein|Name=TCONS_00066783-protein|organism=Clytia hemisphaerica|type=polypeptide|length=411bp
LEVNFRYNKSTFQVNKKMTLDWPLHYEVVAKCSKSKGRASLMRLPHFTVE
TPIFMPVGTQGTMKGLTCDQLRELNCQIILANTYHLGMRPGEDVLNKAGR
LHKFMDWDRGMLTDSGGFQMVSLISLSEVTEEGVRFSSPYDGRDILLTPE
KSMQIQNAIGADIMMQLDDVVDVKVTGPRVEEAMHRSIRWLDRCIEGHQR
KEHQNLFPIIQGGLNLELRTKCIEAMVKRNMPGYAVGGLSGGEAKDDFWK
VVHHCTNLLPRDKPIYVMGVGYAIDLVVCSALGADMFDCVYPTRTARFGT
ALVPSGQLHLKTNQYADDFRPIDDQCTCLTCRKYTRAFIHSLVGKESVAC
YLLSIHNIKYQMNLMTTLRQSIIDDRLEDYIQQFFLKMFPNKDYPSWCIN
ALDAVNIQLVT
Run BLAST on NCBI

transcript from alignment at scaffold_46:207317..215828-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066783 ID=TCONS_00066783|Name=TCONS_00066783|organism=Clytia hemisphaerica|type=transcript|length=8512bp|location=Sequence derived from alignment at scaffold_46:207317..215828- (Clytia hemisphaerica)
TTAGAAGTCAATTTCAGATATAATAAATCAACATTCCAAGTAAATAAAAA
GATGACATTAGATTGGCCATTGCATTATGAAGTTGTTGCCAAATGCTCTA
AAAGTAAAGGACGAGCCTCACTGATGAGGCTACCTCATTTTACAGTTGAG
ACACCTATCTTTATGCCTGTTGGTACCCAAGGTACAATGAAAGGGTTGAC
CTGTGATCAGTTACGTGAACTTAATTGTCAAATCATCCTGGCCAATACTT
ATCACTTAGGAATGAGACCAGTAAGTATATTTGTGATATGCAGCATTGCA
ATATCTTCCACGGACCCAACAGCTGATTGGTTCGTGCAAGTGACGTATTG
ACTGATTTTACGTCATTTACAACAAATCAGCTGCTGGGTCATGTAGACAT
TGCAATGGCGCATATCATGAATTTGTGCATTTATTTTGTATTTTTCGCTT
TATTTGATTATGTTTGAAAAGTGTTTTTATGCTTATTAAAATGTTTTGTA
ACTATTATTTTAGCTCTTTTTAAAGATTTTATTTTTACATAAGTGTTCCC
GTTTCATATCAGAAACATAAGGACAGTGTGTCTGGCCTTTTGTTATATTG
TGCTGATATAAACAAAAAATGTTTTTCTTGCCCTCTTTTTGATCAATCTT
GATTCACATCCGTGTCAATCCAATGTGAAAAAGCAAACGATATCACTCTT
ATTTAAAATAAAACCTTTCAATTTCAATTAAAATCGTCAATCTTAGAAAC
TGAAATGTAATGTTGCTTGGGCGGTGATGATTGTTGCTCCCATGAACGTA
CTTGTGAGAGCATTTCGCTAGCCCACGCTTGTTCGAGTAATGTTGCCGTT
ACGCCACGGCTCACATGGTATCCTTGTAATGTACCGTGTCTGACCTGAAA
TATATTTCATTTATAATATGACAGTCTCTTTTTAACGTAAATTGCGAATT
AATTCTTTAGAAATAATAATAATGGGCTTTTCCAGAAAATATTAGAATTT
GGAAGGGGCGTGGAGTAACTTAAACCGCCGGACAAGGCAAATTTTGTAGA
TTTTTCACTACCCCCTGGACACTATAGCCTCCCCCCTCGTGTACGAACAT
TTTTTGGAAGAGCCTAATATAATAATGAATCACAAAACTCGAGATCTATC
ATTTTGATGCAGCAGGACAATAATCCGAAAATATTTCTGTGAATATCGTT
TGTTGAACAACGCAAAAAAAATCGTCTGATTTAAAAGGCCAACTCATTTA
TTTTATCTATCCCTACAATTCTCTAGGGTGAGGATGTATTGAATAAAGCA
GGAAGGTTACACAAATTCATGGACTGGGACAGGGGAATGCTCACGGTACG
TTTTCATATTGAATTGTTTAAATATTTGTAGCATTTCAGATCTTAATAAT
TTTCTACTTTATCCTCAATGTGTATGCTTTGACAACCTTTGATGTTTCTT
GAGATAATAAGCCTTTTTATACGTTTCCATCCATATTGACATTGAATGAA
TTAATGAAAGCCTTCTCTTTCTACTGAAATATAAATTGTTGCTTTTAACC
TATTGTAAATAACCTGACTTCCTTCTCTTAGGACAGTGGAGGATTTCAAA
TGGTTTCTCTCATCTCTCTGTCAGAAGTCACTGAGGTTTGCTACTAATTT
GTTAAACCATATGAAAGCCTTGGAAACTATTGTTAAAGATTATTACACGA
AACCTTTTTATTTGTTAATCTTTGGCAACTATTGCTAAAGGTCACTGCAC
GAAGCCTAATTTTATTTGTTAGAAAATATCTTTGTCCGAATCGGTCAAAA
GGATTTCTTCATTTTTGTGTACTCTTTGAATCGTCCATAAATACCTAGTA
TCTATGCATGCCTTACTGATCCCAATCTTTCNAACAACGCAAAAAAAATC
GTCTGATTTAAAAGGCCAACTCATTTATTTTATCTATCCCTACAATTCTC
TAGGGTGAGGATGTATTGAATAAAGCAGGAAGGTTACACAAATTCATGGA
CTGGGACAGGGGAATGCTCACGGTACGTTTTCATATTGAATTGTTTAAAT
ATTTGTAGCATTTCAGATCTTAATAATTTTCTACTTTATCCTCAATGTGT
ATGCTTTGACAACCTTTGATGTTTCTTGAGATAATAAGCCTTTTTATACG
TTTCCATCCATATTGACATTGAATGAATTAATGAAAGCCTTCTCTTTCTA
CTGAAATATAAATTGTTGCTTTTAACCTATTGTAAATAACCTGACTTCCT
TCTCTTAGGACAGTGGAGGATTTCAAATGGTTTCTCTCATCTCTCTGTCA
GAAGTCACTGAGGTTTGCTACTAATTTGTTAAACCATATGAAAGCCTTGG
AAACTATTGTTAAAGATTATTACACGAAACCTTTTTATTTGTTAATCTTT
GGCAACTATTGCTAAAGGTCACTGCACGAAGCCTAATTTTATTTGTTAGA
AAATATCTTTGTCCGAATCGGTCAAAAGGATTTCTTCATTTTTGTGTACT
CTTTGAATCGTCCATAAATACCTAGTATCTATGCATGCCTTACTGATCCC
AATCTTTCCAAACTGCAATACAATATATCCATTCATTTGCCGCAAATAAT
GTTTTTTATTGGCCTATTTTTTACTTATTTGCCTTTCACCTTTCAGGAAG
GTGTACGTTTTAGTTCGCCTTACGATGGTCGAGATATTCTTCTTACACCA
GAAAAATCTATGCAGATACAGAATGCTATTGGAGCTGATATCATGATGCA
ATTAGATGACGTAGTCGATGTCAAAGTTACGGGACCGAGAGTAGAAGAAG
CAATGCATCGCTCCATTCGATGGCTCGATCGGTGCATTGAAGGTCATCAA
CGGAAAGAACATCAGAATTTATTCCCTATCATTCAAGGTGGATTGAATTT
GGAACTGAGGACAAAATGTATCGAAGGTACTTGTTATTCTTGAAAAAATT
TCTTGCTGGGCCAGATAAATTTGATAAAAAAGTGAAAACTAAAAATTTAA
TTTTATTCATTGTTTGAAGTTTCGGTGTCTTCTTTGCACCATGATCATAA
GTATAGTAAATACTTGTTATTCGTTAGGAAAAGGAGCCAAGTGGGATGAG
TAATAAGCAAAAACCCTTTGTGCGCGCTGTTTTTTTTAAAAAAGTTGAAA
TTTTTCTAATTTTTTTTTTTAAAACTCAAAACATTAAAGTGCCATAAAAG
CTTGTAGCTTTTGATTTAGAAGATGGTTTTGTTACATTGATAAGCTATTT
TTATACTCCTTCTAAAAGCATTCGGCTTATGCCCCTTTAAATCAAGTTGA
TATTGATTAGCCTCGAGCTAACTAAGTACACATTGTACTACTTTGCATCA
ACTTTAAAGAAAAGAAACATAAACATAAACATAAACACCTTTTAAAAAAT
GCAGGGACGTTTCTACCATGGTTATCCTTATAACTTAGCATTTTTACGTT
TTGAATTATAGCCATGGTCAAACGCAACATGCCAGGTTACGCAGTTGGTG
GTTTGAGCGGTGGTGAGGCCAAGGATGACTTTTGGAAAGTCGTTCATCAT
TGCACTAATCTTTTACCGAGAGATAAACCTATCTATGTTATGGGAGTTGG
GTGAGTAAAAGTTTTCATTTCGAGATCTCATTTTTTAATTATATTTCACC
TCGTCTACTGTTCCACTGTTCTCATTTATTAAATTCCCGTAAACACTCAA
AATATGATATATCGAAAAGTGTCAACGATAAGGCTTTGCAACAGATTGAA
GTCTCGCTAATGGTTTGTTCTCGCAACTTCAGTTAAGCTAGTGCGAATGT
CTGTCTGTCAGTCTGTCCAAAAAATCTGGGACGAAAAATATTGTTTAGCC
TGCCAGTGCGGTGCCCTTGTCCCTGTTGTCAATTTATAAAGTAAAGGTAA
AGGTTTTGAAATTTATTTTTGTTTAGGTATGCGATAGATTTGGTTGTATG
TTCTGCGTTAGGAGCTGATATGTTTGATTGTGTCTACCCCACGCGTACTG
CAGTAAGAAATAGTTTATCAAATATTTTTTCATATTATTTCTCCGTTAAA
AACTTCATCCGTTGTGCTTTTCAAAGGTTAAAGAAAGTCTTTCGAAAGAT
GGCACTCAAATTTTCAATTTTGTCTAAATCCAAAGATTGACCAATTTTTC
TTGACTGATCGGTTGATACTTCTAGACTCCTGAATGCCTGATAATCTTGA
AATCCTCATATAAAAGCTTTTCAATAAACGCCCAATGTTAACAAATACAT
TCAATCGAACGAAACTTAAACATTTTTAAATGTAATTTTTTGATTAAAAT
TTCTTTTCAGAGGTTCGGTACAGCATTGGTGCCATCTGGTCAGCTGCATC
TCAAAACAAACCAATATGCTGACGATTTCAGGCCCATTGACGACCAATGT
ACTTGTTTAACGTGTCGCAAATATACAAGAGCTTTTATCCATAGTTTGGT
TGGCAAGGAATCAGTTGCTTGTTACCTTTTATCCATCCATAATATCAAGT
ATCAGGTCAGGATTTTCAATATAAATTATCCAGTTTGATGGTTTTATTTA
TTGAATAATTCCACCCATAAGTCCACACAACAATCAAATCAATCTGATTG
GTTGAATCTGAAAAGTATGATGTAATTGAGTCAAATAAACCAATCAGTTG
AGCGGACTGTGGGATAGTTAGCCGTAAGTACGGTGATGATGCCAGTGAGT
GGTCTTTTCAAATGTTACTTTGAACGAAGAAATTTCCTTTTCTTGTGCTA
TGACCAAATTTTATCACTAAAAAGATGAGACTTCAGTGCTTGCTTTCGAG
TGTTCAACTCTGTTTTAGATAAACCAATTAGCGGGGACTCGATATCTGAC
AGCTAAGGTGACGNGTGTTCAACTCTGTTTTAGGTAAACCAATTAGGGGG
GACTCGATTTCTGACAGCTAAGGTGACATTTTTAAACAGCTTGGAGCTTG
GATCATCACTCACTATTTTATTCCCACAATTTTGCTTTCAGATGAACCTT
ATGACCACGTTACGTCAAAGTATAATCGACGATCGATTGGAAGATTATAT
ACAACAATTCTTCTTGAAAATGTTCCCTAATAAAGACTATCCTTCGTGGT
GCATAAACGCTCTTGATGCTGTCAATATACAACTTGTCACGTGATACTTA
CATAAGAATGAATAGTATGGTGGGATGGTTTTATAGGTGGATGGATGAGC
AGGTTTTATTTATTTGTCTCACATTTTTATACTTTATTGGCTACAAGAGT
TATATGTTTTCAAAATAATGGTATCTTTGAAATTAAGCTTTCGTTTTTTA
TGTTTTTTTATTGTCACTAGTCTAACTGACCAAAGGCAGTCACGACGTAT
CAAGTACGACTTTAGGAAGACCGCTTAAGCCTTTTTAACCCTATTAGCCC
CAGGGGGGGGGGGTAGAATCTACCACGCTGGAGTTCTTTTGTTTATATCT
CAAAGAAAAATTTTTTAAACGACTTAAAACTTTCTGACTTTTAGTAAAAT
CTTATTAAGAGTACTTGTGCAAAATTTTAGGGTCATAGGTTGTCCATATC
AGGTTTTATGACTTTATCGTGAAACATGACATAAAACCCAGCTAAAATCA
CTTAAAACTCAAAACTTTAAAGTGCTGATAACTTCTAAACTATTTATTCA
ATCATTTTCAAATTTTGACACGTGATAGGCATTGATAATACAAATTTAAA
AAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAA
AATTTTACTCATCTTCAGCATAGATTTTAAGAAAAACTCTTCATGGAAAT
TGCAAAACCGGCAATTATGTTAAAGAACAGTCTTTTACCTTTCAAAATCT
TCAAACAGAATTGAAATATCTTTATTGGTTCAACTGTAATAGACATTTTT
GTAAACCATATATTGGGACTTTTTTTCCAAAAGGTCGAAATTTTGTGATG
ACGTCATCAGTTTTTGCATGACGTCATCAATTTTTTTTTCTTCCTGGAAA
ATTCTATCATGATGGAGAAAATCTGTACCAAATTTCATGGCCATAGCTCT
TCTAGATCGAAAATAATCGAGGGTGGTAGATTCTACCCCCCCCCCCCCNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTGAGCAGGTTTTATTTATTCGTCTCACATTCTTATACTTTATTGGC
TACAAGAGTTATATGTTTTCAAAATAATGGTATCTTTGAAATTAAGCTTT
CGTTTTTTATGTTTTTTTTTATTGTCACCAGTCTCTCTGACCAAAGGCAG
TCACGTCGTATCAAGTACGACTTTAGGAAGACTGCTTAAGCCTTTTTAAA
GCTTTTTGTAAATTATTTACATCTGCCGTGAAGCCGACTTAAAAGATCTC
CGTCAAACAGTTTGAGCATAATAGAAAAATCGTTTTAATTACGTTTGAAA
GTTACTCATGTTGAGAATTTTCATGTTTGCTTCATTTTTCATTTTTGTTC
AATCTACAATTGAAAAATTTATATGGAATATCGATAAAATAACTTTTTCA
TGAAGTTTTTTATATGGGCGTTGAATGACATTGACTATGGCTGGAACCAT
GTAAGAATAATTCTTTTCATTTTTACAACAGTTTACTTTTTGTTTATCTT
ATTTTAAATATCAATTCAAGCATTTTCTACTCGTTGTTAAAGCTTTTCTC
TCTGCCGTCTCAAATTGTTAAATTATGAGCCACAGTTGTTGAACACACTA
CTTTTTCAAGTGGCCGATGAAATTTCCAAGCCAAATTTGATCAGGGCCAA
CATTGAATATGATAGAAGGTTTCTCTTATTACACGACTATAGATTCATCG
GGAGTCCTTACATCAAAATTGATTGATTGTGGGAAAAAATTCTACTGTTT
CAAAAGGATTTCCCTTGTTTTGGATATCTGGGTGACTTTTAGCCGAATTT
CAGAAACTAGGGATCCCTCGGGGGCAAATGGAATAAAGGGAAACTGGCCA
TCGGTCACTGGATAGAGGAGTGTGTTTGTGTTCAATAACTCTGGCTGGGA
GATAAAAATGATTCGATTTTAGCAGAATTTCAGTGGAGTATTATCAAAAA
AGTAAGTAATTTATAGCATATCCTAAAATTTATAACCCGAACGAATAAAA
AAACAGTAAAAAGCTCATGGTTATTGTTTTTTTTCTCAGGAAATGTTTAT
GCTCATTGGTGGTTCTGTTGATCCTTGTTGTTCAGAGTTTGGGTAAGTAA
TAATTTCTTAATTTCTTAATTTTAGATCATTCAGTGAGATAGGGGTTGTC
TTTTCTGACTCTCTTTTTAGTGTGAGAAATGGTGTTTTATGTCACCAGGC
TGTCAGGAGAAATTAATAGTCTCTGGTTCTGTTGACCAGAGTTTAGAGGT
GTAGAAAAAAAATCGAATCAGCTTAATTTTAAACATATTGATATTATTAT
CGCTGTAATGACTGCCTTTTTTCGGTGTACAAACTTTCTCTCAAACTAAT
ATCAATGGCTCCAGTTATCTTACAGTCTACATCTAACTTTTCGCATTCTA
TCAACGTTTAGGTGCTCCACGACACCGTCACACACACAACGAAAAAGCAT
CGGCTAGAAGTTATATCGACATTGATGCATCGGACCCTTTCAAAGTTCCT
AAGAACAGTCATTATATGGAAAATGATATTCCTGAAAATTTCGAAAAAGA
AGAACCAGAATTGAAAGCCAGTGTCTCGGAAGGCGAAGAAAGTCCCGCCC
CTCAAGAACAGGGCGGAGATGAATCTGAACACGAATCAAACGGAGAGCAA
CCGCCAAGTGAACCTCAAGAAGAAGAGGGCGCCGGGCGTGAAGGTCCAGA
CGCCAAAGAAGGTGCGTCAAAAGAATTGCCTCAGGAGCAACCTTCTCAGG
GACAAAATGGAGGAGGTTTGAACGACTTACCGCCAGGGATAACGGAAAAG
ATTGACGAGATAGCAAAGAACCAAGGAAACAGTGACGGAAAACCCATTGA
AATTAATGAAAATGATTTGAAAGGAATGGTGAACAATGCTGGCGGTGCAC
CTCAGGCTGAGGGCGGTCCTCCTGCTGGGGAAGGTGCAGCAGAAGGGGAG
GAAAATTAGATAGAGTGTACTTCTCGACCTGTTTTGAAAAGCAACGCTTT
ATGGATGTATACCTGACAATGGACCATATCGAAAACTTTTATTACGCACA
CCTTTTTCTTCTATTTTGTAATTTTCTTTCGTTTGACAATTTTAAATAGT
TTTGACATTTTCGACAATAATTCGAAGCTAGCAAAGATAAATGTAGGAAT
CAAATAAACCATTAGTCGTTTTGGTGTTTCGGGTCTTATTTGCATTTTTC
TAGGACTTTCAC

Coding sequence (CDS) from alignment at scaffold_46:207317..215828-

>TCONS_00066783 ID=TCONS_00066783|Name=TCONS_00066783|organism=Clytia hemisphaerica|type=CDS|length=9888bp|location=Sequence derived from alignment at scaffold_46:207317..215828- (Clytia hemisphaerica)
ATGAACCTTATGACCACGTTACGTCAAAGTATAATCGACGATCGATTGGA
AGATTATATACAACAATTCTTCTTGAAAATGTTCCCTAATAAAGACTATC
CTTCGTGGTGCATAAACGCTCTTGATGCTGTCAATATACAACTTGTCACG
TGAAGGTTCGGTACAGCATTGGTGCCATCTGGTCAGCTGCATCTCAAAAC
AAACCAATATGCTGACGATTTCAGGCCCATTGACGACCAATGTACTTGTT
TAACGTGTCGCAAATATACAAGAGCTTTTATCCATAGTTTGGTTGGCAAG
GAATCAGTTGCTTGTTACCTTTTATCCATCCATAATATCAAGTATCAGGT
ATGCGATAGATTTGGTTGTATGTTCTGCGTTAGGAGCTGATATGTTTGAT
TGTGTCTACCCCACGCGTACTGCACCATGGTCAAACGCAACATGCCAGGT
TACGCAGTTGGTGGTTTGAGCGGTGGTGAGGCCAAGGATGACTTTTGGAA
AGTCGTTCATCATTGCACTAATCTTTTACCGAGAGATAAACCTATCTATG
TTATGGGAGTTGGGAAGGTGTACGTTTTAGTTCGCCTTACGATGGTCGAG
ATATTCTTCTTACACCAGAAAAATCTATGCAGATACAGAATGCTATTGGA
GCTGATATCATGATGCAATTAGATGACGTAGTCGATGTCAAAGTTACGGG
ACCGAGAGTAGAAGAAGCAATGCATCGCTCCATTCGATGGCTCGATCGGT
GCATTGAAGGTCATCAACGGAAAGAACATCAGAATTTATTCCCTATCATT
CAAGGTGGATTGAATTTGGAACTGAGGACAAAATGTATCGAAGGACAGTG
GAGGATTTCAAATGGTTTCTCTCATCTCTCTGTCAGAAGTCACTGAGGGT
GAGGATGTATTGAATAAAGCAGGAAGGTTACACAAATTCATGGACTGGGA
CAGGGGAATGCTCACGTTAGAAGTCAATTTCAGATATAATAAATCAACAT
TCCAAGTAAATAAAAAGATGACATTAGATTGGCCATTGCATTATGAAGTT
GTTGCCAAATGCTCTAAAAGTAAAGGACGAGCCTCACTGATGAGGCTACC
TCATTTTACAGTTGAGACACCTATCTTTATGCCTGTTGGTACCCAAGGTA
CAATGAAAGGGTTGACCTGTGATCAGTTACGTGAACTTAATTGTCAAATC
ATCCTGGCCAATACTTATCACTTAGGAATGAGACCAATGAACCTTATGAC
CACGTTACGTCAAAGTATAATCGACGATCGATTGGAAGATTATATACAAC
AATTCTTCTTGAAAATGTTCCCTAATAAAGACTATCCTTCGTGGTGCATA
AACGCTCTTGATGCTGTCAATATACAACTTGTCACGTGAAGGTTCGGTAC
AGCATTGGTGCCATCTGGTCAGCTGCATCTCAAAACAAACCAATATGCTG
ACGATTTCAGGCCCATTGACGACCAATGTACTTGTTTAACGTGTCGCAAA
TATACAAGAGCTTTTATCCATAGTTTGGTTGGCAAGGAATCAGTTGCTTG
TTACCTTTTATCCATCCATAATATCAAGTATCAGGTATGCGATAGATTTG
GTTGTATGTTCTGCGTTAGGAGCTGATATGTTTGATTGTGTCTACCCCAC
GCGTACTGCACCATGGTCAAACGCAACATGCCAGGTTACGCAGTTGGTGG
TTTGAGCGGTGGTGAGGCCAAGGATGACTTTTGGAAAGTCGTTCATCATT
GCACTAATCTTTTACCGAGAGATAAACCTATCTATGTTATGGGAGTTGGG
AAGGTGTACGTTTTAGTTCGCCTTACGATGGTCGAGATATTCTTCTTACA
CCAGAAAAATCTATGCAGATACAGAATGCTATTGGAGCTGATATCATGAT
GCAATTAGATGACGTAGTCGATGTCAAAGTTACGGGACCGAGAGTAGAAG
AAGCAATGCATCGCTCCATTCGATGGCTCGATCGGTGCATTGAAGGTCAT
CAACGGAAAGAACATCAGAATTTATTCCCTATCATTCAAGGTGGATTGAA
TTTGGAACTGAGGACAAAATGTATCGAAGGACAGTGGAGGATTTCAAATG
GTTTCTCTCATCTCTCTGTCAGAAGTCACTGAGGGTGAGGATGTATTGAA
TAAAGCAGGAAGGTTACACAAATTCATGGACTGGGACAGGGGAATGCTCA
CGTTAGAAGTCAATTTCAGATATAATAAATCAACATTCCAAGTAAATAAA
AAGATGACATTAGATTGGCCATTGCATTATGAAGTTGTTGCCAAATGCTC
TAAAAGTAAAGGACGAGCCTCACTGATGAGGCTACCTCATTTTACAGTTG
AGACACCTATCTTTATGCCTGTTGGTACCCAAGGTACAATGAAAGGGTTG
ACCTGTGATCAGTTACGTGAACTTAATTGTCAAATCATCCTGGCCAATAC
TTATCACTTAGGAATGAGACCAATGAACCTTATGACCACGTTACGTCAAA
GTATAATCGACGATCGATTGGAAGATTATATACAACAATTCTTCTTGAAA
ATGTTCCCTAATAAAGACTATCCTTCGTGGTGCATAAACGCTCTTGATGC
TGTCAATATACAACTTGTCACGTGAAGGTTCGGTACAGCATTGGTGCCAT
CTGGTCAGCTGCATCTCAAAACAAACCAATATGCTGACGATTTCAGGCCC
ATTGACGACCAATGTACTTGTTTAACGTGTCGCAAATATACAAGAGCTTT
TATCCATAGTTTGGTTGGCAAGGAATCAGTTGCTTGTTACCTTTTATCCA
TCCATAATATCAAGTATCAGGTATGCGATAGATTTGGTTGTATGTTCTGC
GTTAGGAGCTGATATGTTTGATTGTGTCTACCCCACGCGTACTGCACCAT
GGTCAAACGCAACATGCCAGGTTACGCAGTTGGTGGTTTGAGCGGTGGTG
AGGCCAAGGATGACTTTTGGAAAGTCGTTCATCATTGCACTAATCTTTTA
CCGAGAGATAAACCTATCTATGTTATGGGAGTTGGGAAGGTGTACGTTTT
AGTTCGCCTTACGATGGTCGAGATATTCTTCTTACACCAGAAAAATCTAT
GCAGATACAGAATGCTATTGGAGCTGATATCATGATGCAATTAGATGACG
TAGTCGATGTCAAAGTTACGGGACCGAGAGTAGAAGAAGCAATGCATCGC
TCCATTCGATGGCTCGATCGGTGCATTGAAGGTCATCAACGGAAAGAACA
TCAGAATTTATTCCCTATCATTCAAGGTGGATTGAATTTGGAACTGAGGA
CAAAATGTATCGAAGGACAGTGGAGGATTTCAAATGGTTTCTCTCATCTC
TCTGTCAGAAGTCACTGAGGGTGAGGATGTATTGAATAAAGCAGGAAGGT
TACACAAATTCATGGACTGGGACAGGGGAATGCTCACGTTAGAAGTCAAT
TTCAGATATAATAAATCAACATTCCAAGTAAATAAAAAGATGACATTAGA
TTGGCCATTGCATTATGAAGTTGTTGCCAAATGCTCTAAAAGTAAAGGAC
GAGCCTCACTGATGAGGCTACCTCATTTTACAGTTGAGACACCTATCTTT
ATGCCTGTTGGTACCCAAGGTACAATGAAAGGGTTGACCTGTGATCAGTT
ACGTGAACTTAATTGTCAAATCATCCTGGCCAATACTTATCACTTAGGAA
TGAGACCAATGAACCTTATGACCACGTTACGTCAAAGTATAATCGACGAT
CGATTGGAAGATTATATACAACAATTCTTCTTGAAAATGTTCCCTAATAA
AGACTATCCTTCGTGGTGCATAAACGCTCTTGATGCTGTCAATATACAAC
TTGTCACGTGAAGGTTCGGTACAGCATTGGTGCCATCTGGTCAGCTGCAT
CTCAAAACAAACCAATATGCTGACGATTTCAGGCCCATTGACGACCAATG
TACTTGTTTAACGTGTCGCAAATATACAAGAGCTTTTATCCATAGTTTGG
TTGGCAAGGAATCAGTTGCTTGTTACCTTTTATCCATCCATAATATCAAG
TATCAGGTATGCGATAGATTTGGTTGTATGTTCTGCGTTAGGAGCTGATA
TGTTTGATTGTGTCTACCCCACGCGTACTGCACCATGGTCAAACGCAACA
TGCCAGGTTACGCAGTTGGTGGTTTGAGCGGTGGTGAGGCCAAGGATGAC
TTTTGGAAAGTCGTTCATCATTGCACTAATCTTTTACCGAGAGATAAACC
TATCTATGTTATGGGAGTTGGGAAGGTGTACGTTTTAGTTCGCCTTACGA
TGGTCGAGATATTCTTCTTACACCAGAAAAATCTATGCAGATACAGAATG
CTATTGGAGCTGATATCATGATGCAATTAGATGACGTAGTCGATGTCAAA
GTTACGGGACCGAGAGTAGAAGAAGCAATGCATCGCTCCATTCGATGGCT
CGATCGGTGCATTGAAGGTCATCAACGGAAAGAACATCAGAATTTATTCC
CTATCATTCAAGGTGGATTGAATTTGGAACTGAGGACAAAATGTATCGAA
GGACAGTGGAGGATTTCAAATGGTTTCTCTCATCTCTCTGTCAGAAGTCA
CTGAGGGTGAGGATGTATTGAATAAAGCAGGAAGGTTACACAAATTCATG
GACTGGGACAGGGGAATGCTCACGTTAGAAGTCAATTTCAGATATAATAA
ATCAACATTCCAAGTAAATAAAAAGATGACATTAGATTGGCCATTGCATT
ATGAAGTTGTTGCCAAATGCTCTAAAAGTAAAGGACGAGCCTCACTGATG
AGGCTACCTCATTTTACAGTTGAGACACCTATCTTTATGCCTGTTGGTAC
CCAAGGTACAATGAAAGGGTTGACCTGTGATCAGTTACGTGAACTTAATT
GTCAAATCATCCTGGCCAATACTTATCACTTAGGAATGAGACCAATGAAC
CTTATGACCACGTTACGTCAAAGTATAATCGACGATCGATTGGAAGATTA
TATACAACAATTCTTCTTGAAAATGTTCCCTAATAAAGACTATCCTTCGT
GGTGCATAAACGCTCTTGATGCTGTCAATATACAACTTGTCACGTGAAGG
TTCGGTACAGCATTGGTGCCATCTGGTCAGCTGCATCTCAAAACAAACCA
ATATGCTGACGATTTCAGGCCCATTGACGACCAATGTACTTGTTTAACGT
GTCGCAAATATACAAGAGCTTTTATCCATAGTTTGGTTGGCAAGGAATCA
GTTGCTTGTTACCTTTTATCCATCCATAATATCAAGTATCAGGTATGCGA
TAGATTTGGTTGTATGTTCTGCGTTAGGAGCTGATATGTTTGATTGTGTC
TACCCCACGCGTACTGCACCATGGTCAAACGCAACATGCCAGGTTACGCA
GTTGGTGGTTTGAGCGGTGGTGAGGCCAAGGATGACTTTTGGAAAGTCGT
TCATCATTGCACTAATCTTTTACCGAGAGATAAACCTATCTATGTTATGG
GAGTTGGGAAGGTGTACGTTTTAGTTCGCCTTACGATGGTCGAGATATTC
TTCTTACACCAGAAAAATCTATGCAGATACAGAATGCTATTGGAGCTGAT
ATCATGATGCAATTAGATGACGTAGTCGATGTCAAAGTTACGGGACCGAG
AGTAGAAGAAGCAATGCATCGCTCCATTCGATGGCTCGATCGGTGCATTG
AAGGTCATCAACGGAAAGAACATCAGAATTTATTCCCTATCATTCAAGGT
GGATTGAATTTGGAACTGAGGACAAAATGTATCGAAGGACAGTGGAGGAT
TTCAAATGGTTTCTCTCATCTCTCTGTCAGAAGTCACTGAGGGTGAGGAT
GTATTGAATAAAGCAGGAAGGTTACACAAATTCATGGACTGGGACAGGGG
AATGCTCACGTTAGAAGTCAATTTCAGATATAATAAATCAACATTCCAAG
TAAATAAAAAGATGACATTAGATTGGCCATTGCATTATGAAGTTGTTGCC
AAATGCTCTAAAAGTAAAGGACGAGCCTCACTGATGAGGCTACCTCATTT
TACAGTTGAGACACCTATCTTTATGCCTGTTGGTACCCAAGGTACAATGA
AAGGGTTGACCTGTGATCAGTTACGTGAACTTAATTGTCAAATCATCCTG
GCCAATACTTATCACTTAGGAATGAGACCAATGAACCTTATGACCACGTT
ACGTCAAAGTATAATCGACGATCGATTGGAAGATTATATACAACAATTCT
TCTTGAAAATGTTCCCTAATAAAGACTATCCTTCGTGGTGCATAAACGCT
CTTGATGCTGTCAATATACAACTTGTCACGTGAAGGTTCGGTACAGCATT
GGTGCCATCTGGTCAGCTGCATCTCAAAACAAACCAATATGCTGACGATT
TCAGGCCCATTGACGACCAATGTACTTGTTTAACGTGTCGCAAATATACA
AGAGCTTTTATCCATAGTTTGGTTGGCAAGGAATCAGTTGCTTGTTACCT
TTTATCCATCCATAATATCAAGTATCAGGTATGCGATAGATTTGGTTGTA
TGTTCTGCGTTAGGAGCTGATATGTTTGATTGTGTCTACCCCACGCGTAC
TGCACCATGGTCAAACGCAACATGCCAGGTTACGCAGTTGGTGGTTTGAG
CGGTGGTGAGGCCAAGGATGACTTTTGGAAAGTCGTTCATCATTGCACTA
ATCTTTTACCGAGAGATAAACCTATCTATGTTATGGGAGTTGGGAAGGTG
TACGTTTTAGTTCGCCTTACGATGGTCGAGATATTCTTCTTACACCAGAA
AAATCTATGCAGATACAGAATGCTATTGGAGCTGATATCATGATGCAATT
AGATGACGTAGTCGATGTCAAAGTTACGGGACCGAGAGTAGAAGAAGCAA
TGCATCGCTCCATTCGATGGCTCGATCGGTGCATTGAAGGTCATCAACGG
AAAGAACATCAGAATTTATTCCCTATCATTCAAGGTGGATTGAATTTGGA
ACTGAGGACAAAATGTATCGAAGGACAGTGGAGGATTTCAAATGGTTTCT
CTCATCTCTCTGTCAGAAGTCACTGAGGGTGAGGATGTATTGAATAAAGC
AGGAAGGTTACACAAATTCATGGACTGGGACAGGGGAATGCTCACGTTAG
AAGTCAATTTCAGATATAATAAATCAACATTCCAAGTAAATAAAAAGATG
ACATTAGATTGGCCATTGCATTATGAAGTTGTTGCCAAATGCTCTAAAAG
TAAAGGACGAGCCTCACTGATGAGGCTACCTCATTTTACAGTTGAGACAC
CTATCTTTATGCCTGTTGGTACCCAAGGTACAATGAAAGGGTTGACCTGT
GATCAGTTACGTGAACTTAATTGTCAAATCATCCTGGCCAATACTTATCA
CTTAGGAATGAGACCAATGAACCTTATGACCACGTTACGTCAAAGTATAA
TCGACGATCGATTGGAAGATTATATACAACAATTCTTCTTGAAAATGTTC
CCTAATAAAGACTATCCTTCGTGGTGCATAAACGCTCTTGATGCTGTCAA
TATACAACTTGTCACGTGAAGGTTCGGTACAGCATTGGTGCCATCTGGTC
AGCTGCATCTCAAAACAAACCAATATGCTGACGATTTCAGGCCCATTGAC
GACCAATGTACTTGTTTAACGTGTCGCAAATATACAAGAGCTTTTATCCA
TAGTTTGGTTGGCAAGGAATCAGTTGCTTGTTACCTTTTATCCATCCATA
ATATCAAGTATCAGGTATGCGATAGATTTGGTTGTATGTTCTGCGTTAGG
AGCTGATATGTTTGATTGTGTCTACCCCACGCGTACTGCACCATGGTCAA
ACGCAACATGCCAGGTTACGCAGTTGGTGGTTTGAGCGGTGGTGAGGCCA
AGGATGACTTTTGGAAAGTCGTTCATCATTGCACTAATCTTTTACCGAGA
GATAAACCTATCTATGTTATGGGAGTTGGGAAGGTGTACGTTTTAGTTCG
CCTTACGATGGTCGAGATATTCTTCTTACACCAGAAAAATCTATGCAGAT
ACAGAATGCTATTGGAGCTGATATCATGATGCAATTAGATGACGTAGTCG
ATGTCAAAGTTACGGGACCGAGAGTAGAAGAAGCAATGCATCGCTCCATT
CGATGGCTCGATCGGTGCATTGAAGGTCATCAACGGAAAGAACATCAGAA
TTTATTCCCTATCATTCAAGGTGGATTGAATTTGGAACTGAGGACAAAAT
GTATCGAAGGACAGTGGAGGATTTCAAATGGTTTCTCTCATCTCTCTGTC
AGAAGTCACTGAGGGTGAGGATGTATTGAATAAAGCAGGAAGGTTACACA
AATTCATGGACTGGGACAGGGGAATGCTCACGTTAGAAGTCAATTTCAGA
TATAATAAATCAACATTCCAAGTAAATAAAAAGATGACATTAGATTGGCC
ATTGCATTATGAAGTTGTTGCCAAATGCTCTAAAAGTAAAGGACGAGCCT
CACTGATGAGGCTACCTCATTTTACAGTTGAGACACCTATCTTTATGCCT
GTTGGTACCCAAGGTACAATGAAAGGGTTGACCTGTGATCAGTTACGTGA
ACTTAATTGTCAAATCATCCTGGCCAATACTTATCACTTAGGAATGAGAC
CAATGAACCTTATGACCACGTTACGTCAAAGTATAATCGACGATCGATTG
GAAGATTATATACAACAATTCTTCTTGAAAATGTTCCCTAATAAAGACTA
TCCTTCGTGGTGCATAAACGCTCTTGATGCTGTCAATATACAACTTGTCA
CGTGAAGGTTCGGTACAGCATTGGTGCCATCTGGTCAGCTGCATCTCAAA
ACAAACCAATATGCTGACGATTTCAGGCCCATTGACGACCAATGTACTTG
TTTAACGTGTCGCAAATATACAAGAGCTTTTATCCATAGTTTGGTTGGCA
AGGAATCAGTTGCTTGTTACCTTTTATCCATCCATAATATCAAGTATCAG
GTATGCGATAGATTTGGTTGTATGTTCTGCGTTAGGAGCTGATATGTTTG
ATTGTGTCTACCCCACGCGTACTGCACCATGGTCAAACGCAACATGCCAG
GTTACGCAGTTGGTGGTTTGAGCGGTGGTGAGGCCAAGGATGACTTTTGG
AAAGTCGTTCATCATTGCACTAATCTTTTACCGAGAGATAAACCTATCTA
TGTTATGGGAGTTGGGAAGGTGTACGTTTTAGTTCGCCTTACGATGGTCG
AGATATTCTTCTTACACCAGAAAAATCTATGCAGATACAGAATGCTATTG
GAGCTGATATCATGATGCAATTAGATGACGTAGTCGATGTCAAAGTTACG
GGACCGAGAGTAGAAGAAGCAATGCATCGCTCCATTCGATGGCTCGATCG
GTGCATTGAAGGTCATCAACGGAAAGAACATCAGAATTTATTCCCTATCA
TTCAAGGTGGATTGAATTTGGAACTGAGGACAAAATGTATCGAAGGACAG
TGGAGGATTTCAAATGGTTTCTCTCATCTCTCTGTCAGAAGTCACTGAGG
GTGAGGATGTATTGAATAAAGCAGGAAGGTTACACAAATTCATGGACTGG
GACAGGGGAATGCTCACGTTAGAAGTCAATTTCAGATATAATAAATCAAC
ATTCCAAGTAAATAAAAAGATGACATTAGATTGGCCATTGCATTATGAAG
TTGTTGCCAAATGCTCTAAAAGTAAAGGACGAGCCTCACTGATGAGGCTA
CCTCATTTTACAGTTGAGACACCTATCTTTATGCCTGTTGGTACCCAAGG
TACAATGAAAGGGTTGACCTGTGATCAGTTACGTGAACTTAATTGTCAAA
TCATCCTGGCCAATACTTATCACTTAGGAATGAGACCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041762XLOC_041762Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066783-exon-scaffold_46-1575043694:215559..215828TCONS_00066783-exon-scaffold_46-1575043694:215559..215828Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1575043694:214484..214552TCONS_00066783-exon-scaffold_46-1575043694:214484..214552Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1575043694:214194..214247TCONS_00066783-exon-scaffold_46-1575043694:214194..214247Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1575043694:212903..213182TCONS_00066783-exon-scaffold_46-1575043694:212903..213182Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1575043694:212229..212367TCONS_00066783-exon-scaffold_46-1575043694:212229..212367Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1575043694:211827..211902TCONS_00066783-exon-scaffold_46-1575043694:211827..211902Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1575043694:211324..211518TCONS_00066783-exon-scaffold_46-1575043694:211324..211518Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1575043694:210607..210837TCONS_00066783-exon-scaffold_46-1575043694:210607..210837Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1575043694:209079..209497TCONS_00066783-exon-scaffold_46-1575043694:209079..209497Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1575043694:208437..208489TCONS_00066783-exon-scaffold_46-1575043694:208437..208489Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1575043694:207317..208117TCONS_00066783-exon-scaffold_46-1575043694:207317..208117Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1510915933:215559..215828TCONS_00066783-exon-scaffold_46-1510915933:215559..215828Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1510915933:214484..214552TCONS_00066783-exon-scaffold_46-1510915933:214484..214552Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1510915933:214194..214247TCONS_00066783-exon-scaffold_46-1510915933:214194..214247Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1510915933:212903..213182TCONS_00066783-exon-scaffold_46-1510915933:212903..213182Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1510915933:212229..212367TCONS_00066783-exon-scaffold_46-1510915933:212229..212367Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1510915933:211827..211902TCONS_00066783-exon-scaffold_46-1510915933:211827..211902Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1510915933:211324..211518TCONS_00066783-exon-scaffold_46-1510915933:211324..211518Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1510915933:210607..210837TCONS_00066783-exon-scaffold_46-1510915933:210607..210837Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1510915933:209079..209497TCONS_00066783-exon-scaffold_46-1510915933:209079..209497Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1510915933:208437..208489TCONS_00066783-exon-scaffold_46-1510915933:208437..208489Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1510915933:207317..208117TCONS_00066783-exon-scaffold_46-1510915933:207317..208117Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1491911889:215559..215828TCONS_00066783-exon-scaffold_46-1491911889:215559..215828Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1491911889:214484..214552TCONS_00066783-exon-scaffold_46-1491911889:214484..214552Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1491911889:214194..214247TCONS_00066783-exon-scaffold_46-1491911889:214194..214247Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1491911889:212903..213182TCONS_00066783-exon-scaffold_46-1491911889:212903..213182Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1491911889:212229..212367TCONS_00066783-exon-scaffold_46-1491911889:212229..212367Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1491911889:211827..211902TCONS_00066783-exon-scaffold_46-1491911889:211827..211902Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1491911889:211324..211518TCONS_00066783-exon-scaffold_46-1491911889:211324..211518Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1491911889:210607..210837TCONS_00066783-exon-scaffold_46-1491911889:210607..210837Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1491911889:209079..209497TCONS_00066783-exon-scaffold_46-1491911889:209079..209497Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1491911889:208437..208489TCONS_00066783-exon-scaffold_46-1491911889:208437..208489Clytia hemisphaericaexon
TCONS_00066783-exon-scaffold_46-1491911889:207317..208117TCONS_00066783-exon-scaffold_46-1491911889:207317..208117Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066783-proteinTCONS_00066783-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_46supercontigscaffold_46:207317..215828 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.199093	0.096564	0.0839024	0.0716349	1.23703	1.22896	8.48669	8.99033	5.44882	3.79635	10.3353	11.2664	11.6341	10.0997	9.57584	17.5398	10.5569	10.399	0.249993	0.303224	6.45293	6.50059	8.27631	6.94766	8.98931	8.79381	1.3928	0.605714	0.159501	0.0738634
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002616tRNA_ribo_trans-like
IPR004803TGT
Vocabulary: Molecular Function
TermDefinition
GO:0016763transferase activity, transferring pentosyl groups
GO:0008479queuine tRNA-ribosyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006400tRNA modification
GO:0101030tRNA-guanine transglycosylation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0101030 tRNA-guanine transglycosylation
biological_process GO:0006400 tRNA modification
molecular_function GO:0008479 queuine tRNA-ribosyltransferase activity
molecular_function GO:0016763 transferase activity, transferring pentosyl groups
Blast
[Close]
BLAST of TCONS_00066783 vs. Swiss-Prot (Human)
Match: TGT (Queuine tRNA-ribosyltransferase catalytic subunit 1 OS=Homo sapiens GN=QTRT1 PE=1 SV=3)

HSP 1 Score: 509.22 bits (1310), Expect = 1.972e-172
Identity = 234/389 (60.15%), Postives = 301/389 (77.38%), Query Frame = 1 
Query:   67 PLHYEVVAKCSKSKGRASLMRLPHFTVETPIFMPVGTQGTMKGLTCDQLRELNCQIILANTYHLGMRPGEDVLNKAGRLHKFMDWDRGMLTDSGGFQMVSLISLSEVTEEGVRFSSPYDGRDILLTPEKSMQIQNAIGADIMMQLDDVVDVKVTGPRVEEAMHRSIRWLDRCIEGHQRKEHQNLFPIIQGGLNLELRTKCIEAMVKRNMPGYAVGGLSGGEAKDDFWKVVHHCTNLLPRDKPIYVMGVGYAIDLVVCSALGADMFDCVYPTRTARFGTALVPSGQLHLKTNQYADDFRPIDDQCTCLTCRKYTRAFIHSLVGKESVAC-YLLSIHNIKYQMNLMTTLRQSIIDDRLEDYIQQFFLKMFPNKDY-PSWCINALDAVNIQL 1227
            P    +VA+CS+S+ RA  + LPH TV TP+FMPVGTQ TMKG+T +QL  L C+I L NTYHLG+RPG +++ KA  LH FM+W   +LTDSGGFQMVSL+SLSEVTEEGVRF SPYDG + LL+PEKS+QIQNA+G+DI+MQLDDVV   VTGPRVEEAM+RSIRWLDRCI  HQR + QNLF IIQGGL+ +LR  C+E M KR++PG+A+GGLSGGE+K  FW++V   T+ LP+DKP Y+MGVGYA DLVVC ALG DMFDCV+PTRTARFG+ALVP+G L L+   +  DF PID +CTC TC+K++RAF+H+L+  ++ A  + L++HNI YQ+ LM+ +R SI++ R  D+++ F   M+ +    P+W  +AL +V I L
Sbjct:   14 PRIMRLVAECSRSRARAGELWLPHGTVATPVFMPVGTQATMKGITTEQLDALGCRICLGNTYHLGLRPGPELIQKANGLHGFMNWPHNLLTDSGGFQMVSLVSLSEVTEEGVRFRSPYDGNETLLSPEKSVQIQNALGSDIIMQLDDVVSSTVTGPRVEEAMYRSIRWLDRCIAAHQRPDKQNLFAIIQGGLDADLRATCLEEMTKRDVPGFAIGGLSGGESKSQFWRMVALSTSRLPKDKPRYLMGVGYATDLVVCVALGCDMFDCVFPTRTARFGSALVPTGNLQLRKKVFEKDFGPIDPECTCPTCQKHSRAFLHALLHSDNTAALHHLTVHNIAYQLQLMSAVRTSIVEKRFPDFVRDFMGAMYGDPTLCPTWATDALASVGITL 402
The following BLAST results are available for this feature:
BLAST of TCONS_00066783 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TGT1.972e-17260.15Queuine tRNA-ribosyltransferase catalytic subunit ... [more]
back to top