TCONS_00066826-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066826-protein
Unique NameTCONS_00066826-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length322

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066826-protein ID=TCONS_00066826-protein|Name=TCONS_00066826-protein|organism=Clytia hemisphaerica|type=polypeptide|length=322bp
MDLRILVVISFLKTTILALMANTGQLELKGEKLRYIGRELVDSKNVSSEM
ECHLFCLAHKSHCKSMNVEEIAVGTPYLYQCQSFNIRKNPENLPIDFEES
ERSNYYTLIRESITERSCQDWKNKGFDKDDFYVVTYSDEKQTKVFCEMKR
EDGPWLLIQRRTSSRDFYKTWENFKGGFGKGKHQKDKPFWLGNHLIYELT
KSKSQGVDLLIEAVDSDGKIATGRYAHFSIKQETEYFRLSSDLIHVSGFS
GFETLAGFSFATKDRSSLSAQTCVNSAQTAWWFGNDCNVEIDLNQRNSFV
WNALTANNSNVDIVKTTMMIKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041789XLOC_041789Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066826TCONS_00066826Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 113..322
e-value: 1.5E-13
score: 43.9
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 115..288
e-value: 9.4E-29
score: 100.7
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 109..322
score: 26.171
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 113..321
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 47..259
e-value: 3.9E-30
score: 104.7
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 260..311
e-value: 0.001
score: 18.6

Blast
[Close]
BLAST of TCONS_00066826-protein vs. Swiss-Prot (Human)
Match: TENX (Tenascin-X OS=Homo sapiens GN=TNXB PE=1 SV=4)

HSP 1 Score: 82.8037 bits (203), Expect = 2.342e-17
Identity = 45/149 (30.20%), Postives = 75/149 (50.34%), Query Frame = 0 
Query:  139 EKQTKVFCEMKREDGPWLLIQRRTSSR-DFYKTWENFKGGFGKGKHQKDKPFWLGNHLIYELTKSKSQGVDLLIEAVDSDGKIATGRYAHFSIKQETEYFRLSSDLIHVSGFSGFETLAGFSFATKDRSSLSAQ-TCVNSAQTAWWFGN 285
            E+   VFC+M+ + G WL+ QRR   + DF++ WE++  GFG    +    FWLGN  ++ LT++    + + + A D   +    +Y  F +    EY+RL  +  H +        +G  F+ +DR   S   +C  S + AWW+ N
Sbjct: 4051 ERPLNVFCDMETDGGGWLVFQRRMDGQTDFWRDWEDYAHGFGNISGE----FWLGNEALHSLTQAGDYSMRVDLRAGD---EAVFAQYDSFHVDSAAEYYRLHLEGYHGTAGDSMSYHSGSVFSARDRDPNSLLISCAVSYRGAWWYRN 4192
The following BLAST results are available for this feature:
BLAST of TCONS_00066826-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TENX2.342e-1730.20Tenascin-X OS=Homo sapiens GN=TNXB PE=1 SV=4[more]
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