TCONS_00066893-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066893-protein
Unique NameTCONS_00066893-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length552

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066893-protein ID=TCONS_00066893-protein|Name=TCONS_00066893-protein|organism=Clytia hemisphaerica|type=polypeptide|length=552bp
MLALLRRHSNFTKFGCRTIRRFRVLDGNLSLDQSERDRLADEAQKSEELY
QEKLAQVMAGKLKHFQXLYQEKLAQIMAGSSASAVARHTQKNKKLLARDR
IKLLVDQDYPVLELSALAGLDMEYGDVLSAGIVGCIAKVSGQLCVINAND
ATVKGGTIYPISLKKQLRLQEICEQNNLPAVYLIDSGGAFLPLQSEIFVE
GGRSFYNEAIMNSKGIPQLCMVAGSCTAGAAYIPTMANEVVMVDKIGTIF
LAGPPLVHAAIGQQITEEALGGATVHCEVSGCADYKAKDEIDAIDTMKDV
LSTLNLPEFLPKLSFVEDPFFNEEDLSILSVKRDADGKLDTKKIVARIVD
GSRFHEYKPTYGREIICGFARLGSMLVGVVANDGRFTPQSCLKASNFVCL
CDERGIPLVFLQDILKVENAETAIELIKYQAELMSYVATTQVPKITIIMG
NSFGVGNYAMCGRSMSPRFLFSWPTARVSIHSVDDMKQTINNDEKHLQRL
EREVTSVYSSSRIWDDGIVLPKDTRQALIQSLTASMMHKETKKSSNKNVV
RL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041824XLOC_041824Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066893TCONS_00066893Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034733AcCoA_carboxyl
IPR011763COA_CT_C
IPR011762COA_CT_N
IPR029045ClpP/crotonase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016874ligase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016874 ligase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 483..503
NoneNo IPR availableCOILSCoilCoilcoord: 36..56
NoneNo IPR availableGENE3D3.90.226.10coord: 44..300
e-value: 1.1E-47
score: 161.9
NoneNo IPR availableGENE3D3.90.226.10coord: 301..512
e-value: 1.7E-35
score: 122.3
IPR034733Acetyl-CoA carboxylasePFAMPF01039Carboxyl_transcoord: 91..542
e-value: 3.0E-87
score: 293.3
IPR011763Acetyl-coenzyme A carboxyltransferase, C-terminalPROSITEPS50989COA_CT_CTERcoord: 323..552
score: 12.72
IPR011762Acetyl-coenzyme A carboxyltransferase, N-terminalPROSITEPS50980COA_CT_NTERcoord: 58..316
score: 35.435
IPR029045ClpP/crotonase-like domainSUPERFAMILY52096ClpP/crotonasecoord: 74..306
IPR029045ClpP/crotonase-like domainSUPERFAMILY52096ClpP/crotonasecoord: 275..532

Blast
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BLAST of TCONS_00066893-protein vs. Swiss-Prot (Human)
Match: MCCB (Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Homo sapiens GN=MCCC2 PE=1 SV=1)

HSP 1 Score: 398.282 bits (1022), Expect = 7.427e-133
Identity = 224/516 (43.41%), Postives = 314/516 (60.85%), Query Frame = 0 
Query:   49 LYQEKLAQVMAGKLKHFQXLYQEKLAQIMAGSSASAVARHTQKNKKLLARDRIKLLVDQDYPVLELSALAGLDM-EYGDVLSAGIVGCIAKVSGQLCVINANDATVKGGTIYPISLKKQLRLQEICEQNNLPAVYLIDSGGAFLPLQSEIFVEG---GRSFYNEAIMNSKGIPQLCMVAGSCTAGAAYIPTMANEVVMVDKIGTIFLAGPPLVHAAIGQQITEEALGGATVHCEVSGCADYKAKDEIDAIDTMKDVLSTLNLPEFLP-KLSFVEDPFFNEEDLSILSVKRDADGKLDTKKIVARIVDGSRFHEYKPTYGREIICGFARLGSMLVGVVANDGRFTPQSCLKASNFVCLCDERGIPLVFLQDI--LKVENAETAIELIKYQAELMSYVATTQVPKITIIMGNSFGVGNYAMCGRSMSPRFLFSWPTARVSI---HSVDDMKQTINNDEKH------------------LQRLEREVTSVYSSSRIWDDGIVLPKDTRQALIQSLTASM 536
            LYQE   Q     +K       E++  I  G    A A H  + K LL R+RI  L+D   P LELS  AG  + +  +V   GI+  I +VSG  C+I ANDATVKGG  YP+++KKQLR QEI  QN LP +YL+DSGGA+LP Q+++F +    GR+FYN+AIM+SK I Q+ +V GSCTAG AY+P MA+E ++V K GTIFLAGPPLV AA G++++ E LGGA +HC  SG +D+ A D+  A+   + V+  LN  + L   +   E+P F  ++L  + V  +     D ++++ARIVDGSRF E+K  YG  ++ GFAR+    VG+V N+G    +S  K ++FV LC +R IPL+FLQ+I    V     A  + K  A++++ VA  QVPKIT+I+G S+G GNY MCGR+ SPRFL+ WP AR+S+       ++  TI  D++                   +++ E E    YSS+R+WDDGI+ P DTR  L  S +A++
Sbjct:   41 LYQENYKQ-----MKALVNQLHERVEHIKLGGGEKARALHISRGK-LLPRERIDNLIDPGSPFLELSQFAGYQLYDNEEVPGGGIITGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPRQADVFPDRDHFGRTFYNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTRKVVRNLNYQKKLDVTIEPSEEPLFPADELYGI-VGANLKRSFDVREVIARIVDGSRFTEFKAFYGDTLVTGFARIFGYPVGIVGNNGVLFSESAKKGTHFVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAKDGAKMVAAVACAQVPKITLIIGGSYGAGNYGMCGRAYSPRFLYIWPNARISVMGGEQAANVLATITKDQRAREGKQFSSADEAALKEPIIKKFEEEGNPYYSSARVWDDGIIDPADTRLVLGLSFSAAL 549
The following BLAST results are available for this feature:
BLAST of TCONS_00066893-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MCCB7.427e-13343.41Methylcrotonoyl-CoA carboxylase beta chain, mitoch... [more]
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