TCONS_00066893 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066893
Unique NameTCONS_00066893
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2836

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066893 ID=TCONS_00066893|Name=TCONS_00066893|organism=Clytia hemisphaerica|type=transcript|length=2836bp
CatttgctttctttttgttGTGGAACACAGACAAAGACAGCAaatccaaa
taaaaaacaattattaaaaACAAATAACGTTTTGATAATTCTGCACAATT
TTGACAAACATGTTAGCTCTGTTAAGAAGACACtccaattttaccaaatt
tgGGTGTAGAACTATCAGAAGGTTTCGTGTGTTGGATGGAAATCTGTCCT
TGGATCAAAGTGAAAGAGATAGACTAGCGGATGAAGCACAAAAGTCAGAA
GAGTTGTATCAAGAGAAACTGGCTCAAGTTATGGCAGGTAAGTTGAAGCA
TTTTCAGANGTTGTATCAAGAGAAATTGGCTCAAATTATGGCAGGAAGTA
GTGCATCAGCTGTAGCCCGTCATACACAGAAAAATAAGAAACTGCTAGCT
CGAGATCGGATTAAACTACTTGTAGACCAGGACTACCCTGTTTTGGAGCT
AAGTGCTCTGGCTGGATTGGACATGGAGTATGGGGACGTTTTGAGTGCTG
GTATTGTGGGTTGTATAGCAAAAGTCAGTGGCCAGCTATGCGTCATCAAT
GCTAATGATGCTACTGTCAAAGGTGGAACAATTTATCCCATCTCGTTGAA
GAAACAACTTCGTTTACAAGAGATTTGCGAACAGAACAATCTTCCTGCTG
TTTATCTCATCGATTCGGGTGGTGCTTTCTTGCCGTTACAATCAGAAATT
TTTGTTGAAGGTGGACGCTCTTTTTATAATGAAGCAATCATGAACTCCAA
AGGAATTCCACAGTTATGTATGGTTGCCGGTTCGTGCACAGCTGGAGCGG
CTTACATCCCTACAATGGCTAACGAAGTCGTCATGGTTGACAAAATAGGA
ACTATTTTCTTGGCTGGTCCTCCACTAGTGCACGCGGCTATCGGCCAACA
AATCACAGAAGAAGCATTGGGTGGAGCCACGGTGCACTGTGAGGTTTCTG
GATGTGCTGATTATAAAGCTAAAGATGAAATTGATGCTATAGATACGATG
AAAGATGTTTTATCGACTTTGAACTTACCAGAGTTCTTGCCGAAGTTGTC
ATTCGTTGAGGACCCGTTCTTTAATGAAGAGGATCTGTCTATTTTGTCCG
TAAAGCGTGACGcggacggaaaattagacacaAAGAAGATTGTAGCACGC
ATTGTTGATGGAAGTCGTTTTCACGAATATAAACCAACTTATGGGCGTGA
AATCATATGTGGATTTGCGCGACTGGGGAGTATGCTTGTTGGTGTGGTCG
CAAATGATGGGCGTTTCACGCCTCAATCTTGTTTGAAAGCTTCCAATTTT
GTTTGTCTGTGTGATGAAAGAGGAATCCCTCTTGTGTTCCTTCAAGACAT
CTTGAAAGTCGAAAATGCGGAAACCGCGATAGAACTTATTAAGTATCAAG
CTGAATTAATGTCGTACGTAGCTACAACTCAAGTTCCAAAGATTACTATT
ATAATGGGAAACAGTTTTGGAGTTGGCAACTATGCTATGTGTGGTCGTAG
CATGAGTCCACGATTCTTGTTTTCATGGCCGACGGCCCGTGTTAGTATAC
ATAGCGTTGATGACATGAAACAGACTATAAATAATGATGAAAAGCACTTG
CAGAGGCTAGAACGTGAAGTCACTTCTGTTTATAGTTCGTCACGTATTTG
GGATGATGGAATTGTTTTACCAAAAGATACACGGCAGGCTTTGATTCAAT
CTTTGACAGCTAGTATGATGCATAAGGAGACTAAGAAGTCTTCGAATAAA
AATGTGGTCAGACTTTAAATAGAGTATTCGCTAACGTAACGATATGTCGG
AACGCGTTTGCAATAATTATTTTACCCTTGATTTTATTCAGGGTCAGGTT
GTAAATagtaatgattttatttttaaggttttattttttatacgtACTGT
ACGCTTCACACGACCTTTAAGAATAATTATGAATTTTAATGAAACTACAG
TAGACTCCCAGTTATTCGAAGCTCCAAGGGGGtaagaatttacttcgaat
aaccgggagttcgAATAATataactgaaaaattcattttcctGTTAGATT
CTCAACTTAGACTTAATTGGAGGGATTTTTCTGAAGTAATTGAGACATTG
TGGTTCAGTTGAGCGtaataaacacaaagaaattgcTTGAATAGCAATAT
ATAGCCATGAATATTGAAACCTGATTTATTAGAGAAAATTTCAATAGCAG
AAAATCAATGTTCTCACTCGAAGATCTCCCAATATGAACAATTAATTCGA
ATAACTGAGGCTGATTTAGCCTATAATGTATCCCCAGGGGAATAGAAATC
GCTTCGAATAACTGAACGTTCAAATAACTGAAGTTCGGATAACCGAGAGT
GTTTTTGCCTGGGTTGAGTAAGCAGATCCAAGGGGAACACCATCTCACTT
CGAATAACCGGTAGTCTATTGTATGAATGAAAGAAAAACTATAAAGATTT
TGAATGGAATATCCGACTAGACGAATGGTCACTAAAAAAAAACGATAAAC
ATTAAAGCACTTAGAGTgcacagtttgaacaaaaatatcctcTTTTGCTC
CTCCCCCGGTTCGTTTCTAACTGcatcttgaaagaaaaattgtgGTTTAA
AGGCCAGACCACAGAAagaaaaacacctttaaaaacCTTGTTTTATACGG
gacaatttttcattattttatggATAATATTCAGTTCCAATTtcgcattt
tatttttaatcactTCTTTTTAGAATTAACAGGATAACTTATGAGTTATG
ATAggtaatttttgtaaataaaactTATGGATTTTATGGATTCTTAacgt
taaaatatttttgaagaattttcacttGATATTTTC
Run BLAST on NCBI

protein sequence of TCONS_00066893-protein

>TCONS_00066893-protein ID=TCONS_00066893-protein|Name=TCONS_00066893-protein|organism=Clytia hemisphaerica|type=polypeptide|length=552bp
MLALLRRHSNFTKFGCRTIRRFRVLDGNLSLDQSERDRLADEAQKSEELY
QEKLAQVMAGKLKHFQXLYQEKLAQIMAGSSASAVARHTQKNKKLLARDR
IKLLVDQDYPVLELSALAGLDMEYGDVLSAGIVGCIAKVSGQLCVINAND
ATVKGGTIYPISLKKQLRLQEICEQNNLPAVYLIDSGGAFLPLQSEIFVE
GGRSFYNEAIMNSKGIPQLCMVAGSCTAGAAYIPTMANEVVMVDKIGTIF
LAGPPLVHAAIGQQITEEALGGATVHCEVSGCADYKAKDEIDAIDTMKDV
LSTLNLPEFLPKLSFVEDPFFNEEDLSILSVKRDADGKLDTKKIVARIVD
GSRFHEYKPTYGREIICGFARLGSMLVGVVANDGRFTPQSCLKASNFVCL
CDERGIPLVFLQDILKVENAETAIELIKYQAELMSYVATTQVPKITIIMG
NSFGVGNYAMCGRSMSPRFLFSWPTARVSIHSVDDMKQTINNDEKHLQRL
EREVTSVYSSSRIWDDGIVLPKDTRQALIQSLTASMMHKETKKSSNKNVV
RL
Run BLAST on NCBI

transcript from alignment at scaffold_462:625158..637167+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066893 ID=TCONS_00066893|Name=TCONS_00066893|organism=Clytia hemisphaerica|type=transcript|length=12010bp|location=Sequence derived from alignment at scaffold_462:625158..637167+ (Clytia hemisphaerica)
CatttgctttctttttgttGTGGAACACAGACAAAGACAGGTAATATTTT
GGTATTTATTATCTCGACAACTGACAACAAAAAGGCTTTTACATCTTTCT
CTTAGCATAAATGGACTATTGGCTTTAAAACACagtctgttttgtttttg
tttttctatctATAATAATAATTGGCTAGacacctttttttcttttactg
ttGTTTTGCTTGTGGGTAAGATTTCCACTTTCCAGACTAAGACAGCAACT
TACTGCCACTCTTCTTGTTAAGGTCAGTATTCTGAGTATCGTGAgtttgg
gtaacttgcatcagtggaggctaacaacATGCCCAGATGATCTCAATTGA
acggaatcgacaatcgaaccagtcgaaccaaatcgaacgcaatcgaccga
tcgaaattcgattgtcgaacgcaatcgaatctcaatcgaacgtcaaaatt
ctgggtaatattcgattggttcgattgttgttcgactggttcgattgtcg
tTCGACTGCATTCGATTGTTCGGGTGAAACAAGATCAagaaggcatgtcc
caaatatattttgagtgacgcgcaccgcttcccattattccttaactctc
atatatagctcaaaagaatcaaatcaacgagaggatttcgaaaaggGTCA
GCTTTTTAACAAagattagtctctctaagggtcggatcCTAATTAgtgac
tccagaagtcatgcaactttcgttgacgttaCTTACTTGTGTTACTTGTG
TTACTTGTGTGGTTGTTCGAGCATCCTGcttgggaggtcgtcagtagtcc
gacactttctagtccgacagtaaaaatgtccgacgttggatttgacgaaa
gtgtcagtattccgacaacaattttgtccgcNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATataaaaatcgaaatatg
aatcgTGGAAGAGGAAACACATCttttccgattttgaggttaggccccta
aacccgacttttcttaaattttggaaagcttgttacgattaggctttcaa
gagtcaagagattggatttagctgtttttacgaccctattctttagtgat
ttacacccttgattggtcctttatttctacTTATGTCAAAATGTCgccaa
aataaacttttattaatattatctcagagaaaaacccttattcaacattc
gacactctaaaatcttgcgttttcggacaaaagtgacgtcggaaaaaaaN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNttatcagaaaaagggtgaggaattc
aaaaatcacaatcgctaattctagttctttcattttcatgtagtttttta
aacttttttgcttctttagcatgggaaagtcccaaaaaaaagtttttatt
tctgccgaaatggattttcttttcatggggtttctcctttcagaaaaact
tattctttactcataagtttttgttcctccatttccagaggccccttgaa
aatggatcctaccaccttttttgactcaNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgatata
tctttcgttattttgataaatatactaaatattttacaaatatttttata
taataatattttaacaccatcaaagaattctccctccaaatttgaggtct
ttAGCTACGagcaggtctaaaacgcctaatacctaatacttaatacttac
tacctaatacctaatatttactgtatatacctcaaaattgctcgaaaata
cctttaaaataatcagcATGCCCAACTCGACCTAATCTGGaaatttggtg
ttaaaaaaatttcaactttttgtcttatagcgttttgaagacatgaaagt
attttctctctttttttctcttcacttTATTCTTccgcgctttttctata
aagtttacagactGCACAGATTTTGTCGAGATTTTCGTAGGAGAAGAATA
TTTCGTTTGCTCATTCATATTagcattatttataagaaacagtcgatctg
aaaattcaaaataagtgAGTATTCCCCTGTTTCATTGGAGCAGGTAACTG
AAGTAGATGACCGAGAATATTTTGGCTTGACttgattttattacaaaccT
GATTACAAATGACCCTTTCGAAACTTAATTATAGTAAGAATTATTAATGT
GCTGAATAAGATGCTTTAAATATCACTAGATAGAAATTTCTAGTAGAAAG
TGCTAAAAGAGAGATTTTTGGAGGTGCCAATTGAACTTTTGCCTATTATT
GACAAAGTGAcattatttgacaaaaatattattatagttATTGAATATAA
ATCCCTACGAACCAATCTCAAGAAGTATTATGACACTACTCGATATGATG
CAGATAATACAAAATGATACAATTAATGACCTATATCTAATTTCGAAGAG
CGTTTAAATAACATTTTAGCCAATTGAATCTTTATAAAggatacaggggt
gtataagaataactgatttgaatatttacatatgttttcttataattaga
TCAAAGTCATATAAAAGagcaggaaaaagaaaaaaaactaagaTAATGAC
CTTTTGCTTTGTACTTAAATGGggcgaagaaaatatttactttaatgcaa
aaatatttaaatattcttttagataacacatTGAAAGACTTCAGgtaaat
ataaagcaaagactGTTAGCATTCAAATTCCAAGAAACTTAGGGTGCATA
CCATAACATGCGAAGGAGAGTCAGGGTCTggaagttctggtctgtaaagt
atccaaacggattaggtagtcagtattaagtattaagtagtaagtattaa
gtagtaggtattaggcgttttagacctgccccTTTAGCTACAcaagaaaa
agagatatgcaaaatttaagaagcatgactggaaaatttcttttttttct
ttgttgacccatttttcgagtttttccaagctattttcctaacctttttt
ttgacatttttagtcaaatttttgacactaaaatttgaatatctttacaa
ccactaatcctctggaggcctaNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTctaatcaaacgcaatcgaacatcaatcgaacgcaatcgaatctcaat
cgaacgtcaaaattctgggtaatattcgattggttcgattattgttcgac
tggttcgattgttgttcgactgcaTTCGATTgttcgggtgaaacaaggca
tgtcccaattATATTTTACGTGACGCGCACTGCTTCCCATTATTCCTTAA
ctctcatatatagctcaaaagaatcgaatcaacgagaggatttcgaaaag
gGTCAGCTTTTTAACAAagattagtctctctaagggtcggatcctaatcg
aacgcaatcgaacatcaatcgaatgcaatcgaatatcaattgaatctgaa
aattgcggtaatattcgattgagattcaatcgcgttcgacaatcgaattt
caatcggtcaattgcgttcgatttggttcgactggttcgatcgtcgattc
cgttcgattgagattgtctggacatgcatagccctcaaatgatgaatgac
ctggctggtcattaaaatacaactacgcagctccgctcgcagctctactc
tgccatttttgttttgatttaaaattgtattttaatgaccagccaggtca
ttcatttgagggctatgcatgttagactccactgatgcaagttacccaat
ctcacggtagttgAGGAACAAGCTTTGGAATGAACCAGTTTCCTAACAGT
TAGTGGAAATACCTCCATTTAAAGCATGTTCATAGTTCACAATaacaact
ttctttttattacggaaaccaaacaagtgagaacaagtcattaaaactaa
aagtcagcacTCCGTGCTTGTGACGTAGGTTTTGTAATCGATTTTCAAAG
TTTCTTGTTTCTGCGTCATTTTTAAAACCTCTTTTAGTAGGAGAACGtgt
ttgttattcaataaataaggaattttataacacttcatggcagattaaaa
agacaattagaTAACaaatgtttctttgtttttcatttttgcatttatat
atggggaagaatgaaattttcagaagatgcttaatttgatatgaggattc
ccatttctGTAAAATCGCGATCCCCATGGTTGCGAAATGGCTCCTCCTCC
TTCTTCAGCACTCGAAGGCTACTGAAGTTAAAGCATTTAAGATATTCTTA
CattgatattcactgaaacaccgtTCTTTTCGCGCCGTAGTGGAGTGCAT
GACATAACACGTGTGGCAACtactttaggtgtacaaactttcgggagcat
aaactttcgcgaattgccctgtttaaaattttcaaaggcatttactttcg
cgaaaaaggctaaaatttgcaaaaattgcgaaagtttctgctcccAAAAC
TCTGTACACCTAAAGTAACTCGCCATCTGTTATCTTgcaagataatttgt
tttggtctctggctttgggaagtagcaatgttggttgttttcgatggaaa
atggttaAGAAACTTGctgtgtcatttagtttttgctggctgatagaaag
gcaggatcctggatggtttccctaactgcaTAAACATATCATTAAAAACT
ATATACCAGACTCTACCACTCAATTACAATCAataatttctttcaaataa
taACTAGGTATGAACTTAATCGATAACCAATTGATTGATTGGATATCAAT
TGATTCTGATAATAGTTAAATAAAAGTTATAGATTGTATCGATAGTGGGA
GAGTCTGGAATATAGGcataaaagaaaaggaaaaggaaaaagtCTACTAA
ATAACTTGAATAACTAATAACTTTAGCATAAATGGTCCTTCAGAAGATGA
CACTACCATTTTGATTAACGTTTACTCCAGCCGTTctttcctttgtttac
tttggagAGTAATTATTTCTTAAACACGGAAAGGGATGGGAAAAAGAGCT
GTGGTAAACCTCCAACAAAAATGGCAGTGTCGTTTTCTAAAGGGCTATTA
CTTAACTCAAGCAGTATAGCCcttaactcttcatacaaaatttaAAGTAC
AATacacaaatattttaaatattaaaCCATAGTGTGTGTGATTCCCCTCA
AAATGATTGAATCTTCATCACAGGACTTGaaattatttatttgtttttag
tcAGTAGGAGGACTTGGTTCACCTGACAAATAGTataatatgggttttta
ttttattttctcattataagGTCCCTTGGGACTGCAAAACAAGTTTTTGC
CAACTTGGCAAAGCATTGAAGGGGGTAAGGTCATTTTGGCCTAGAGACAC
TTGGATTCTAGTAGGTACCTTTAATTTGTATCTCAAATTCTTTCATCCTT
TTTTTATAGCAaatccaaataaaaaacaattattaaaaACAAATAACGTT
TTGATAATTCTGCACAATTTTGACAAACATGTTAGCTCTGTTAAGAAGAC
ACtccaattttaccaaatttgGGTGTAGAACTATCAGAAGGTTTCGTGTG
TTGGATGGAAATCTGTCCTTGGATCAAAGTGAAAGAGATAGACTAGCGGA
TGAAGCACAAAAGTCAGAAGAGTTGTATCAAGAGAAACTGGCTCAAGTTA
TGGCAGGTAAGTTGAAGCATTTTCAGANGTTGTATCAAGAGAAATTGGCT
CAAATTATGGCAGGTAAGTTGAAGCATTTTCAGATCTAATTATCCCcata
atctttttttgaaattgttcttgATAATCTGGTGTAATACTTGCTTTCTG
TATTATATCAGATTGCAACGTTTTAGTCTAATATTCGTTTTGACAGCAAG
GCAACTACTTCTTCACTCCCAAAAGTACCCATAATTTCGGAGTGACGATG
aaattgtgatttatttttGCATGTTAAGAGCCAACGTATTACTTTTGTTT
CACCCTCAAACACTTTTCgtttcgtttattttttctttaagaattATTTT
TGTTAATGTAATATTTCATACTGTAAGTTTACAAAAATCAACTTACACGA
TGATATATTTAATTCGATTTAATTCCAACTTTGTTAAGCTGGCTTTATAT
TAGAAAAAATAAGCAAATACCTGTTTGCAATAAATTCAGATGATGTTTTT
CTCTCATCATCGCGCAGAAATATGAAAAATGGATCTTTCGTTTCGATTCC
CAAGGTTGTCTTGAAGTTcaataatttgcaaaaaaaaaattcggggTGAA
CCAATGATTGTCCAGTGGACACCCAGTTTTGCCACTAAGTATAATTTTCC
TCTCTCTTTTTTCAGGAAGTAGTGCATCAGCTGTAGCCCGTCATACACAG
AAAAATAAGAAACTGCTAGCTCGAGATCGGATTAAACTACTTGTAGACCA
GGACTACCCTGTTTTGGAGCTAAGTGCTCTGGCTGGATTGGACATGGAGT
ATGGGGACGTTTTGAGTGCTGGTATTGTGGGTTGTATAGCAAAAGTCAGT
GGCCAGCTATGCGTCATCAATGCTAATGATGCTACTGTCAAAGGTACTTT
TTTTTAACTAAAAGCATAACTAATATATTACACTAATATATTACACCATA
TTCATCAAGTATTTTAGATTCTCATAAGTAATCGATGTTAGAAACTTTTT
GATTAGGGAAGGTATATTTATATGCCCAAGATAAATTTTAGCATGTGAAC
ATGTTCACACACTTACACTTAATTAATTTGATAACTTCTTGGAACctcac
aaaaaaatcagaacTTTCTTAGAAGAAACACGCCAATTAAATATACTGAT
TATTTTCTTATTCGTACACTAACATTACAGGTGGAACAATTTATCCCATC
TCGTTGAAGAAACAACTTCGTTTACAAGAGATTTGCGAACAGAACAATCT
TCCTGCTGTTTATCTCATCGATTCGGGTGGTGCTTTCTTGCCGTTACAAT
CAGAAATTTTTGTTGAAGGTGGACGCTCTTTTTATAATGAAGCAATCATG
AACTCCAAAGGAATTCCACAGGTATTGTTGCCCCTTTATTTATGAAACTT
TTTATACAGGGGCATAAAGTTAGTACGTTATTAGAGCCCATAGTATAAAG
GGTAGAGTATCCGGCTACGATGCACAAGGTAAAGGTCAATCCTGGTCGGC
TCATACCAAagacttgatgcctctctgtttGATGCTCTGCAACAGAATTT
ATCAAGCTAGTTTAGTCATCGTGTCTGTGCGACCTGAAcgaggggtctga
tccccccttcttaaatgaccccccccccttcttggcatccccccaacctt
taaaaatgcctatcccccaagggttttgggctaaatNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNccccccccccttcttcacttttttggaaggtg
tcacccctccttaagaaagggggggtgTCCAAACTATGTACGGTCTGTCT
CTGAGACCACGCTCTGTTCTAAAGGGGTATAGCGAATGTGacgatctgac
ctggttgttcagccaaaacattcaaaactgcgtagctttttgcttgaaaa
cgaaagcgaaggCGGGTGGGTTCTAATCTTTATGTTTATGATTGGCTTTG
ATTATGGTGCGATTGTTTTGCTTCAGCCATTCTTcgcgctcaaaagctca
ttcAATATTCAACCCAAATgtggatgaaaaagatcaaagcggtGCGCCAA
CCTGGGTAGATTTTCTTACGGAGCCATGTCCTCTAAAGTGAATACGTGTC
ATGCGCGGAgaatcagaatctgctcggagattacCACATTAGCATAAATA
TGTTCAGCAAATATTTTTATCCAGTAAAATTCTTGCAAATTCATTTTGTG
GTTTGATAGAAGACTGataatttttcattcttttcagTTATGTATGGTTG
CCGGTTCGTGCACAGCTGGAGCGGCTTACATCCCTACAATGGCTAACGAA
GTCGTCATGGTTGACAAAATAGGAACTATTTTCTTGGCTGGTCCTCCACT
AGTGCACGCGGCTATCGGCCAACAAATCACAGAAGAAGCATTGGGTGGAG
CCACGGTGCACTGTGAGGTTTCTGGATGTGCTGATTATAAAGCTAAAGAT
GAAATTGATGCTATAGATACGATGAAAGATGTTTTATCGACTTTGAACTT
ACCAGAGTTCTTGCCGAAGTTGTCATTCGTTGAGGACCCGTTCTTTAATG
AAGAGGATCTGTCTATTTTGTCCGTAAAGCGTGACGcggacggaaaatta
gacacaAAGAAGATTGTAGCACGCATTGTTGATGGAAGTCGTTTTCACGA
ATATAAACCAACTTATGGGCGTGAAATCATATGTGGATTTGCGCGACTGG
GGAGTATGCTTGTTGGTGTGGTCGCAAATGATGGGCGTTTCACGCCTCAA
TCTTGTTTGAAAGCTTCCAATTTTGTTTGTCTGTGTGATGAAAGAGGAAT
CCCTCTTGTGTTCCTTCAAGACATCTTGAAAGTCGAAAATGCGGAAACCG
CGATAGAACTTATTAAGTATCAAGCTGAATTAATGTCGTACGTAGCTACA
ACTCAAGTTCCAAAGATTACTATTATAATGGGAAACAGTTTTGGAGTTGG
CAACTATGCTATGTGTGGTCGTAGCATGAGTCCACGATTCTTGTTTTCAT
GGCCGACGGCCCGTGTTAGTATACATAGCGTTGATGACATGAAACAGACT
ATAAATAATGATGAAAAGCACTTGCAGAGGCTAGAACGTGAAGTCACTTC
TGTTTATAGTTCGTCACGTATTTGGGATGATGGAATTGTTTTACCAAAAG
ATACACGGCAGGCTTTGATTCAATCTTTGACAGCTAGTATGATGCATAAG
GAGACTAAGAAGTCTTCGAATAAAAATGTGGTCAGACTTTAAATAGAGTA
TTCGCTAACGTAACGATATGTCGGAACGCGTTTGCAATAATTATTTTACC
CTTGATTTTATTCAGGGTCAGGTTGTAAATagtaatgattttatttttaa
ggttttattttttatacgtACTGTACGCTTCACACGACCTTTAAGAATAA
TTATGAATTTTAATGAAACTACAGTAGACTCCCAGTTATTCGAAGCTCCA
AGGGGGtaagaatttacttcgaataaccgggagttcgAATAATataactg
aaaaattcattttcctGTTAGATTCTCAACTTAGACTTAATTGGAGGGAT
TTTTCTGAAGTAATTGAGACATTGTGGTTCAGTTGAGCGtaataaacaca
aagaaattgcTTGAATAGCAATATATAGCCATGAATATTGAAACCTGATT
TATTAGAGAAAATTTCAATAGCAGAAAATCAATGTTCTCACTCGAAGATC
TCCCAATATGAACAATTAATTCGAATAACTGAGGCTGATTTAGCCTATAA
TGTATCCCCAGGGGAATAGAAATCGCTTCGAATAACTGAACGTTCAAATA
ACTGAAGTTCGGATAACCGAGAGTGTTTTTGCCTGGGTTGAGTAAGCAGA
TCCAAGGGGAACACCATCTCACTTCGAATAACCGGTAGTCTATTGTATGA
ATGAAAGAAAAACTATAAAGATTTTGAATGGAATATCCGACTAGACGAAT
GGTCACTAAAAAAAAACGATAAACATTAAAGCACTTAGAGTgcacagttt
gaacaaaaatatcctcTTTTGCTCCTCCCCCGGTTCGTTTCTAACTGcat
cttgaaagaaaaattgtgGTTTAAAGGCCAGACCACAGAAagaaaaacac
ctttaaaaacCTTGTTTTATACGGgacaatttttcattattttatggATA
ATATTCAGTTCCAATTtcgcattttatttttaatcactTCTTTTTAGAAT
TAACAGGATAACTTATGAGTTATGATAggtaatttttgtaaataaaactT
ATGGATTTTATGGATTCTTAacgttaaaatatttttgaagaattttcact
tGATATTTTC

Coding sequence (CDS) from alignment at scaffold_462:625158..637167+

>TCONS_00066893 ID=TCONS_00066893|Name=TCONS_00066893|organism=Clytia hemisphaerica|type=CDS|length=6636bp|location=Sequence derived from alignment at scaffold_462:625158..637167+ (Clytia hemisphaerica)
ATGTTAGCTCTGTTAAGAAGACACtccaattttaccaaatttgGGTGTAG
AACTATCAGAAGGTTTCGTGTGTTGGATGGAAATCTGTCCTTGGATCAAA
GTGAAAGAGATAGACTAGCGGATGAAGCACAAAAGTCAGAAGAGTTGTAT
CAAGAGAAACTGGCTCAAGTTATGGCAGGTAAGTTGAAGCATTTTCAGAN
GTTGTATCAAGAGAAATTGGCTCAAATTATGGCAGGAAGTAGTGCATCAG
CTGTAGCCCGTCATACACAGAAAAATAAGAAACTGCTAGCTCGAGATCGG
ATTAAACTACTTGTAGACCAGGACTACCCTGTTTTGGAGCTAAGTGCTCT
GGCTGGATTGGACATGGAGTATGGGGACGTTTTGAGTGCTGGTATTGTGG
GTTGTATAGCAAAAGTCAGTGGCCAGCTATGCGTCATCAATGCTAATGAT
GCTACTGTCAAAGGTGGAACAATTTATCCCATCTCGTTGAAGAAACAACT
TCGTTTACAAGAGATTTGCGAACAGAACAATCTTCCTGCTGTTTATCTCA
TCGATTCGGGTGGTGCTTTCTTGCCGTTACAATCAGAAATTTTTGTTGAA
GGTGGACGCTCTTTTTATAATGAAGCAATCATGAACTCCAAAGGAATTCC
ACAGTTATGTATGGTTGCCGGTTCGTGCACAGCTGGAGCGGCTTACATCC
CTACAATGGCTAACGAAGTCGTCATGGTTGACAAAATAGGAACTATTTTC
TTGGCTGGTCCTCCACTAGTGCACGCGGCTATCGGCCAACAAATCACAGA
AGAAGCATTGGGTGGAGCCACGGTGCACTGTGAGGTTTCTGGATGTGCTG
ATTATAAAGCTAAAGATGAAATTGATGCTATAGATACGATGAAAGATGTT
TTATCGACTTTGAACTTACCAGAGTTCTTGCCGAAGTTGTCATTCGTTGA
GGACCCGTTCTTTAATGAAGAGGATCTGTCTATTTTGTCCGTAAAGCGTG
ACGcggacggaaaattagacacaAAGAAGATTGTAGCACGCATTGTTGAT
GGAAGTCGTTTTCACGAATATAAACCAACTTATGGGCGTGAAATCATATG
TGGATTTGCGCGACTGGGGAGTATGCTTGTTGGTGTGGTCGCAAATGATG
GGCGTTTCACGCCTCAATCTTGTTTGAAAGCTTCCAATTTTGTTTGTCTG
TGTGATGAAAGAGGAATCCCTCTTGTGTTCCTTCAAGACATCTTGAAAGT
CGAAAATGCGGAAACCGCGATAGAACTTATTAAGTATCAAGCTGAATTAA
TGTCGTACGTAGCTACAACTCAAGTTCCAAAGATTACTATTATAATGGGA
AACAGTTTTGGAGTTGGCAACTATGCTATGTGTGGTCGTAGCATGAGTCC
ACGATTCTTGTTTTCATGGCCGACGGCCCGTGTTAGTATACATAGCGTTG
ATGACATGAAACAGACTATAAATAATGATGAAAAGCACTTGCAGAGGCTA
GAACGTGAAGTCACTTCTGTTTATAGTTCGTCACGTATTTGGGATGATGG
AATTGTTTTACCAAAAGATACACGGCAGGCTTTGATTCAATCTTTGACAG
CTAGTATGATGCATAAGGAGACTAAGAAGTCTTCGAATAAAAATGTGGTC
AGACTTTAAATGTTAGCTCTGTTAAGAAGACACtccaattttaccaaatt
tgGGTGTAGAACTATCAGAAGGTTTCGTGTGTTGGATGGAAATCTGTCCT
TGGATCAAAGTGAAAGAGATAGACTAGCGGATGAAGCACAAAAGTCAGAA
GAGTTGTATCAAGAGAAACTGGCTCAAGTTATGGCAGGTAAGTTGAAGCA
TTTTCAGANGTTGTATCAAGAGAAATTGGCTCAAATTATGGCAGGAAGTA
GTGCATCAGCTGTAGCCCGTCATACACAGAAAAATAAGAAACTGCTAGCT
CGAGATCGGATTAAACTACTTGTAGACCAGGACTACCCTGTTTTGGAGCT
AAGTGCTCTGGCTGGATTGGACATGGAGTATGGGGACGTTTTGAGTGCTG
GTATTGTGGGTTGTATAGCAAAAGTCAGTGGCCAGCTATGCGTCATCAAT
GCTAATGATGCTACTGTCAAAGGTGGAACAATTTATCCCATCTCGTTGAA
GAAACAACTTCGTTTACAAGAGATTTGCGAACAGAACAATCTTCCTGCTG
TTTATCTCATCGATTCGGGTGGTGCTTTCTTGCCGTTACAATCAGAAATT
TTTGTTGAAGGTGGACGCTCTTTTTATAATGAAGCAATCATGAACTCCAA
AGGAATTCCACAGTTATGTATGGTTGCCGGTTCGTGCACAGCTGGAGCGG
CTTACATCCCTACAATGGCTAACGAAGTCGTCATGGTTGACAAAATAGGA
ACTATTTTCTTGGCTGGTCCTCCACTAGTGCACGCGGCTATCGGCCAACA
AATCACAGAAGAAGCATTGGGTGGAGCCACGGTGCACTGTGAGGTTTCTG
GATGTGCTGATTATAAAGCTAAAGATGAAATTGATGCTATAGATACGATG
AAAGATGTTTTATCGACTTTGAACTTACCAGAGTTCTTGCCGAAGTTGTC
ATTCGTTGAGGACCCGTTCTTTAATGAAGAGGATCTGTCTATTTTGTCCG
TAAAGCGTGACGcggacggaaaattagacacaAAGAAGATTGTAGCACGC
ATTGTTGATGGAAGTCGTTTTCACGAATATAAACCAACTTATGGGCGTGA
AATCATATGTGGATTTGCGCGACTGGGGAGTATGCTTGTTGGTGTGGTCG
CAAATGATGGGCGTTTCACGCCTCAATCTTGTTTGAAAGCTTCCAATTTT
GTTTGTCTGTGTGATGAAAGAGGAATCCCTCTTGTGTTCCTTCAAGACAT
CTTGAAAGTCGAAAATGCGGAAACCGCGATAGAACTTATTAAGTATCAAG
CTGAATTAATGTCGTACGTAGCTACAACTCAAGTTCCAAAGATTACTATT
ATAATGGGAAACAGTTTTGGAGTTGGCAACTATGCTATGTGTGGTCGTAG
CATGAGTCCACGATTCTTGTTTTCATGGCCGACGGCCCGTGTTAGTATAC
ATAGCGTTGATGACATGAAACAGACTATAAATAATGATGAAAAGCACTTG
CAGAGGCTAGAACGTGAAGTCACTTCTGTTTATAGTTCGTCACGTATTTG
GGATGATGGAATTGTTTTACCAAAAGATACACGGCAGGCTTTGATTCAAT
CTTTGACAGCTAGTATGATGCATAAGGAGACTAAGAAGTCTTCGAATAAA
AATGTGGTCAGACTTTAAATGTTAGCTCTGTTAAGAAGACACtccaattt
taccaaatttgGGTGTAGAACTATCAGAAGGTTTCGTGTGTTGGATGGAA
ATCTGTCCTTGGATCAAAGTGAAAGAGATAGACTAGCGGATGAAGCACAA
AAGTCAGAAGAGTTGTATCAAGAGAAACTGGCTCAAGTTATGGCAGGTAA
GTTGAAGCATTTTCAGANGTTGTATCAAGAGAAATTGGCTCAAATTATGG
CAGGAAGTAGTGCATCAGCTGTAGCCCGTCATACACAGAAAAATAAGAAA
CTGCTAGCTCGAGATCGGATTAAACTACTTGTAGACCAGGACTACCCTGT
TTTGGAGCTAAGTGCTCTGGCTGGATTGGACATGGAGTATGGGGACGTTT
TGAGTGCTGGTATTGTGGGTTGTATAGCAAAAGTCAGTGGCCAGCTATGC
GTCATCAATGCTAATGATGCTACTGTCAAAGGTGGAACAATTTATCCCAT
CTCGTTGAAGAAACAACTTCGTTTACAAGAGATTTGCGAACAGAACAATC
TTCCTGCTGTTTATCTCATCGATTCGGGTGGTGCTTTCTTGCCGTTACAA
TCAGAAATTTTTGTTGAAGGTGGACGCTCTTTTTATAATGAAGCAATCAT
GAACTCCAAAGGAATTCCACAGTTATGTATGGTTGCCGGTTCGTGCACAG
CTGGAGCGGCTTACATCCCTACAATGGCTAACGAAGTCGTCATGGTTGAC
AAAATAGGAACTATTTTCTTGGCTGGTCCTCCACTAGTGCACGCGGCTAT
CGGCCAACAAATCACAGAAGAAGCATTGGGTGGAGCCACGGTGCACTGTG
AGGTTTCTGGATGTGCTGATTATAAAGCTAAAGATGAAATTGATGCTATA
GATACGATGAAAGATGTTTTATCGACTTTGAACTTACCAGAGTTCTTGCC
GAAGTTGTCATTCGTTGAGGACCCGTTCTTTAATGAAGAGGATCTGTCTA
TTTTGTCCGTAAAGCGTGACGcggacggaaaattagacacaAAGAAGATT
GTAGCACGCATTGTTGATGGAAGTCGTTTTCACGAATATAAACCAACTTA
TGGGCGTGAAATCATATGTGGATTTGCGCGACTGGGGAGTATGCTTGTTG
GTGTGGTCGCAAATGATGGGCGTTTCACGCCTCAATCTTGTTTGAAAGCT
TCCAATTTTGTTTGTCTGTGTGATGAAAGAGGAATCCCTCTTGTGTTCCT
TCAAGACATCTTGAAAGTCGAAAATGCGGAAACCGCGATAGAACTTATTA
AGTATCAAGCTGAATTAATGTCGTACGTAGCTACAACTCAAGTTCCAAAG
ATTACTATTATAATGGGAAACAGTTTTGGAGTTGGCAACTATGCTATGTG
TGGTCGTAGCATGAGTCCACGATTCTTGTTTTCATGGCCGACGGCCCGTG
TTAGTATACATAGCGTTGATGACATGAAACAGACTATAAATAATGATGAA
AAGCACTTGCAGAGGCTAGAACGTGAAGTCACTTCTGTTTATAGTTCGTC
ACGTATTTGGGATGATGGAATTGTTTTACCAAAAGATACACGGCAGGCTT
TGATTCAATCTTTGACAGCTAGTATGATGCATAAGGAGACTAAGAAGTCT
TCGAATAAAAATGTGGTCAGACTTTAAATGTTAGCTCTGTTAAGAAGACA
CtccaattttaccaaatttgGGTGTAGAACTATCAGAAGGTTTCGTGTGT
TGGATGGAAATCTGTCCTTGGATCAAAGTGAAAGAGATAGACTAGCGGAT
GAAGCACAAAAGTCAGAAGAGTTGTATCAAGAGAAACTGGCTCAAGTTAT
GGCAGGTAAGTTGAAGCATTTTCAGANGTTGTATCAAGAGAAATTGGCTC
AAATTATGGCAGGAAGTAGTGCATCAGCTGTAGCCCGTCATACACAGAAA
AATAAGAAACTGCTAGCTCGAGATCGGATTAAACTACTTGTAGACCAGGA
CTACCCTGTTTTGGAGCTAAGTGCTCTGGCTGGATTGGACATGGAGTATG
GGGACGTTTTGAGTGCTGGTATTGTGGGTTGTATAGCAAAAGTCAGTGGC
CAGCTATGCGTCATCAATGCTAATGATGCTACTGTCAAAGGTGGAACAAT
TTATCCCATCTCGTTGAAGAAACAACTTCGTTTACAAGAGATTTGCGAAC
AGAACAATCTTCCTGCTGTTTATCTCATCGATTCGGGTGGTGCTTTCTTG
CCGTTACAATCAGAAATTTTTGTTGAAGGTGGACGCTCTTTTTATAATGA
AGCAATCATGAACTCCAAAGGAATTCCACAGTTATGTATGGTTGCCGGTT
CGTGCACAGCTGGAGCGGCTTACATCCCTACAATGGCTAACGAAGTCGTC
ATGGTTGACAAAATAGGAACTATTTTCTTGGCTGGTCCTCCACTAGTGCA
CGCGGCTATCGGCCAACAAATCACAGAAGAAGCATTGGGTGGAGCCACGG
TGCACTGTGAGGTTTCTGGATGTGCTGATTATAAAGCTAAAGATGAAATT
GATGCTATAGATACGATGAAAGATGTTTTATCGACTTTGAACTTACCAGA
GTTCTTGCCGAAGTTGTCATTCGTTGAGGACCCGTTCTTTAATGAAGAGG
ATCTGTCTATTTTGTCCGTAAAGCGTGACGcggacggaaaattagacaca
AAGAAGATTGTAGCACGCATTGTTGATGGAAGTCGTTTTCACGAATATAA
ACCAACTTATGGGCGTGAAATCATATGTGGATTTGCGCGACTGGGGAGTA
TGCTTGTTGGTGTGGTCGCAAATGATGGGCGTTTCACGCCTCAATCTTGT
TTGAAAGCTTCCAATTTTGTTTGTCTGTGTGATGAAAGAGGAATCCCTCT
TGTGTTCCTTCAAGACATCTTGAAAGTCGAAAATGCGGAAACCGCGATAG
AACTTATTAAGTATCAAGCTGAATTAATGTCGTACGTAGCTACAACTCAA
GTTCCAAAGATTACTATTATAATGGGAAACAGTTTTGGAGTTGGCAACTA
TGCTATGTGTGGTCGTAGCATGAGTCCACGATTCTTGTTTTCATGGCCGA
CGGCCCGTGTTAGTATACATAGCGTTGATGACATGAAACAGACTATAAAT
AATGATGAAAAGCACTTGCAGAGGCTAGAACGTGAAGTCACTTCTGTTTA
TAGTTCGTCACGTATTTGGGATGATGGAATTGTTTTACCAAAAGATACAC
GGCAGGCTTTGATTCAATCTTTGACAGCTAGTATGATGCATAAGGAGACT
AAGAAGTCTTCGAATAAAAATGTGGTCAGACTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041824XLOC_041824Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066893-exon-scaffold_462-1491911889:625158..625197TCONS_00066893-exon-scaffold_462-1491911889:625158..625197Clytia hemisphaericaexon
TCONS_00066893-exon-scaffold_462-1510915933:625158..625197TCONS_00066893-exon-scaffold_462-1510915933:625158..625197Clytia hemisphaericaexon
TCONS_00066893-exon-scaffold_462-1575043694:625158..625197TCONS_00066893-exon-scaffold_462-1575043694:625158..625197Clytia hemisphaericaexon
TCONS_00066893-exon-scaffold_462-1491911889:632567..632870TCONS_00066893-exon-scaffold_462-1491911889:632567..632870Clytia hemisphaericaexon
TCONS_00066893-exon-scaffold_462-1510915933:632567..632870TCONS_00066893-exon-scaffold_462-1510915933:632567..632870Clytia hemisphaericaexon
TCONS_00066893-exon-scaffold_462-1575043694:632567..632870TCONS_00066893-exon-scaffold_462-1575043694:632567..632870Clytia hemisphaericaexon
TCONS_00066893-exon-scaffold_462-1491911889:633473..633700TCONS_00066893-exon-scaffold_462-1491911889:633473..633700Clytia hemisphaericaexon
TCONS_00066893-exon-scaffold_462-1510915933:633473..633700TCONS_00066893-exon-scaffold_462-1510915933:633473..633700Clytia hemisphaericaexon
TCONS_00066893-exon-scaffold_462-1575043694:633473..633700TCONS_00066893-exon-scaffold_462-1575043694:633473..633700Clytia hemisphaericaexon
TCONS_00066893-exon-scaffold_462-1491911889:633988..634178TCONS_00066893-exon-scaffold_462-1491911889:633988..634178Clytia hemisphaericaexon
TCONS_00066893-exon-scaffold_462-1510915933:633988..634178TCONS_00066893-exon-scaffold_462-1510915933:633988..634178Clytia hemisphaericaexon
TCONS_00066893-exon-scaffold_462-1575043694:633988..634178TCONS_00066893-exon-scaffold_462-1575043694:633988..634178Clytia hemisphaericaexon
TCONS_00066893-exon-scaffold_462-1491911889:635095..637167TCONS_00066893-exon-scaffold_462-1491911889:635095..637167Clytia hemisphaericaexon
TCONS_00066893-exon-scaffold_462-1510915933:635095..637167TCONS_00066893-exon-scaffold_462-1510915933:635095..637167Clytia hemisphaericaexon
TCONS_00066893-exon-scaffold_462-1575043694:635095..637167TCONS_00066893-exon-scaffold_462-1575043694:635095..637167Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066893-proteinTCONS_00066893-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:625158..637167 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.33919	1.52072	3.52663	5.4155	16.2818	12.3768	18.2657	20.0098	21.5853	22.1738	22.3571	18.3497	9.25123	8.66539	13.0798	13.0791	9.07561	9.40178	4.55879	7.37266	4.14638	4.96422	4.47012	4.47039	9.71484	11.0125	10.1571	10.2694	7.3564	7.05426
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR034733AcCoA_carboxyl
IPR011763COA_CT_C
IPR011762COA_CT_N
IPR029045ClpP/crotonase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016874ligase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016874 ligase activity
Blast
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BLAST of TCONS_00066893 vs. Swiss-Prot (Human)
Match: MCCB (Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Homo sapiens GN=MCCC2 PE=1 SV=1)

HSP 1 Score: 397.127 bits (1019), Expect = 3.554e-126
Identity = 224/516 (43.41%), Postives = 314/516 (60.85%), Query Frame = 2 
Query:  254 LYQEKLAQVMAGKLKHFQXLYQEKLAQIMAGSSASAVARHTQKNKKLLARDRIKLLVDQDYPVLELSALAGLDM-EYGDVLSAGIVGCIAKVSGQLCVINANDATVKGGTIYPISLKKQLRLQEICEQNNLPAVYLIDSGGAFLPLQSEIFVEG---GRSFYNEAIMNSKGIPQLCMVAGSCTAGAAYIPTMANEVVMVDKIGTIFLAGPPLVHAAIGQQITEEALGGATVHCEVSGCADYKAKDEIDAIDTMKDVLSTLNLPEFLP-KLSFVEDPFFNEEDLSILSVKRDADGKLDTKKIVARIVDGSRFHEYKPTYGREIICGFARLGSMLVGVVANDGRFTPQSCLKASNFVCLCDERGIPLVFLQDI--LKVENAETAIELIKYQAELMSYVATTQVPKITIIMGNSFGVGNYAMCGRSMSPRFLFSWPTARVSI---HSVDDMKQTINNDEKH------------------LQRLEREVTSVYSSSRIWDDGIVLPKDTRQALIQSLTASM 1717
            LYQE   Q     +K       E++  I  G    A A H  + K LL R+RI  L+D   P LELS  AG  + +  +V   GI+  I +VSG  C+I ANDATVKGG  YP+++KKQLR QEI  QN LP +YL+DSGGA+LP Q+++F +    GR+FYN+AIM+SK I Q+ +V GSCTAG AY+P MA+E ++V K GTIFLAGPPLV AA G++++ E LGGA +HC  SG +D+ A D+  A+   + V+  LN  + L   +   E+P F  ++L  + V  +     D ++++ARIVDGSRF E+K  YG  ++ GFAR+    VG+V N+G    +S  K ++FV LC +R IPL+FLQ+I    V     A  + K  A++++ VA  QVPKIT+I+G S+G GNY MCGR+ SPRFL+ WP AR+S+       ++  TI  D++                   +++ E E    YSS+R+WDDGI+ P DTR  L  S +A++
Sbjct:   41 LYQENYKQ-----MKALVNQLHERVEHIKLGGGEKARALHISRGK-LLPRERIDNLIDPGSPFLELSQFAGYQLYDNEEVPGGGIITGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPRQADVFPDRDHFGRTFYNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTRKVVRNLNYQKKLDVTIEPSEEPLFPADELYGI-VGANLKRSFDVREVIARIVDGSRFTEFKAFYGDTLVTGFARIFGYPVGIVGNNGVLFSESAKKGTHFVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAKDGAKMVAAVACAQVPKITLIIGGSYGAGNYGMCGRAYSPRFLYIWPNARISVMGGEQAANVLATITKDQRAREGKQFSSADEAALKEPIIKKFEEEGNPYYSSARVWDDGIIDPADTRLVLGLSFSAAL 549
The following BLAST results are available for this feature:
BLAST of TCONS_00066893 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MCCB3.554e-12643.41Methylcrotonoyl-CoA carboxylase beta chain, mitoch... [more]
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