TCONS_00066948-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066948-protein
Unique NameTCONS_00066948-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length796

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066948-protein ID=TCONS_00066948-protein|Name=TCONS_00066948-protein|organism=Clytia hemisphaerica|type=polypeptide|length=796bp
MFEEIFEENKSKKKVRCIICQCWLPSNSDQVKASHVNGKSHKQKCEFKEK
QSQTLKHSVYVKGFDPLTTNLETRLQELFEELGGGEVEDVYVDKNSAKYC
FIKYTSESSVAEVLSKSHNVSLDGKKLFIKPRMQPSMQSEAAKKQEKSTT
KKSKSPPSAYDSSIQATLNDIPKAISLMDQMSRFKEGFGLSQGDMEVRML
ICQLLQSVLEEAYPNCQVKLFGSSANGLGCKGCDLDITVLSGESDDNLEQ
PTSILKEMREILERFAPGFKNIFLVESQKNCSIIKMYHTDSELNVDLSLN
NRLAISNTELLKAYICQDDTIQSFFFTVRAWAKMNNLIGRNAGQMTNYAL
MLMMIHFLQQHDPPYLLCLQDCHGNKLTNDMIGPWDCWFAKERTAVKSRI
EDPGLLLLRFFKFAHEQLSSPKIIAIHTLKPLQKYQLHPELTRTVFITQD
PFKLSHNVTQNITEDGLQNLQQVFTKILGRLESLKNFSLHEIIRKEAKLK
VKAKSSHTSTKAFPTEEKPAQKTSKPSSNKEVFVIDLPQTSKDQNGCIEI
VKKILTEDLKLIIQLSSPANSKDTMTKHPTLNKKRKIIDSTPFQPDSKKS
KTMTESSGDYSQKAEKESSCPEDVEIQPLKGNETSMASEIMNNGADATKD
DSIASNEKNIHLSNDTCISFTGIAYQETWTSRRKQRRMLAHSNLKSSIET
VGNPLKSEDTSTSDTIAEKNVNVGTSLVSEAINGVSDTTQEALKDDIKLN
VKFEMTSVLKDNKRKLTMTLLQGDVKTYQMFFAYFKKKLINSFSVP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041840XLOC_041840Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066948TCONS_00066948Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 58..130
e-value: 6.3E-7
score: 39.0
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 59..127
e-value: 1.1E-4
score: 21.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 57..134
score: 10.19
IPR000504RNA recognition motif domainSUPERFAMILY54928RNA-binding domain, RBDcoord: 51..137
NoneNo IPR availableGENE3D1.10.1410.10coord: 294..490
e-value: 2.9E-30
score: 104.6
NoneNo IPR availableGENE3D3.30.70.330coord: 47..160
e-value: 1.1E-12
score: 47.5
NoneNo IPR availableGENE3D3.30.460.10coord: 200..293
e-value: 1.6E-4
score: 21.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 570..622
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 504..529
NoneNo IPR availableCDDcd05402NT_PAP_TUTasecoord: 197..315
e-value: 7.32578E-25
score: 99.9391
NoneNo IPR availableCDDcd00590RRM_SFcoord: 59..130
e-value: 1.27768E-9
score: 54.6185
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 180..315
NoneNo IPR availableSUPERFAMILY81631PAP/OAS1 substrate-binding domaincoord: 322..487

Blast
[Close]
BLAST of TCONS_00066948-protein vs. Swiss-Prot (Human)
Match: TUT7 (Terminal uridylyltransferase 7 OS=Homo sapiens GN=ZCCHC6 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.809e-30
Identity = 92/321 (28.66%), Postives = 165/321 (51.40%), Query Frame = 0 
Query:  172 PKAISLMDQMS-RFKEGFGLSQGDMEVRMLICQLLQSVLEEAYPNCQVKLFGSSANGLGCKGCDLDI--TVLSGESDDNLEQPTSILKEMREILERFAPGFKNIFLVESQKNCSIIKMYHTDSELNVDLSLNNRLAISNTELLKAYICQDDTIQSFFFTVRAWAKMNNLIGRNAGQMTNYALMLMMIHFLQQHDPPYLLCLQDCH-GNKLTNDMIGPWDCWFAKE-------RTAVKSRIEDPGLLLLRFFKFAHEQLS-SPKIIAIHTLKPLQKYQLHPELTRTVFITQDPFKLSHNVTQNITEDGLQNLQQVFTKILGR 480
            PK ++++DQ+  +  + F  +  + + R  I Q L+S + + +P  ++ LFGSS NG G K  DLD+  T+   E+ + L+   +I +E+  +L + + G +NI  + + K   I+K +H  S L VD+SL N LA+ NT LL AY   D  ++   +T++ + KM ++   + G +++YA  LM+++FLQQ +PP +  LQ+ + G K     +  W+ +F  +        +      E  G L L   +F  E+      +I+I     L  ++   + T    + +DPF L+HN+   ++      + + F  I GR
Sbjct:  995 PKFLNILDQVCIQCYKDFSPTIIEDQAREHIRQNLESFIRQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEGLDCVRTI-EELARVLRKHS-GLRNILPITTAK-VPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIYKGEKKPEIFVDGWNIYFFDQIDELPTYWSECGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFK--KQWTSKYIVIEDPFDLNHNLGAGLSRKMTNFIMKAF--INGR 1308
The following BLAST results are available for this feature:
BLAST of TCONS_00066948-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TUT71.809e-3028.66Terminal uridylyltransferase 7 OS=Homo sapiens GN=... [more]
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