TCONS_00067626-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067626-protein
Unique NameTCONS_00067626-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length679

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067626-protein ID=TCONS_00067626-protein|Name=TCONS_00067626-protein|organism=Clytia hemisphaerica|type=polypeptide|length=679bp
TGNFLTQLNYCDKKVCKVWENDCNKGIDVVKPTLPGHTPRPLYTNKPQLS
WSLLLSFSRRASGGQEPTTTICPDHQLYDTFESKCVPFRCPPNYVIIDGG
GKCVRRKPLLTIGDEDKPIVETRGLTTAKTDRSFPFNNLTEFFISNFKYA
LYVIQPKTFNASSVQHNAPSIIPKITLEHFVEDNSRIVYRTLNTSTLQIF
EQLQFNANPNTSFVLAPYFDERLVSKNHGLDFSRVFPEHRTCAKPKIVSI
DEILFNKNTVSKTMSYRNQSLHPSNLTLWISKRSSNDSFQEYFSVCEGFY
LTKPCFRKTLNSSDIINITDNLKLITKSHIQYTFNEYIPTSDGYETCVAN
NKNTSSISKDNDRYYIIRQIEFYITVIGTPLSIVCYIWIITTYFIFKDLR
TVPGLNNCLMCLSLLFSDIFFLSTLKAHEDKTSCTTVAVAMHWSLLSAFF
WVLIISYDLVKRFGSFTSNSRDRELKRMSYRSAMAFGIPLVIVSIALGLD
TSGDVAVGYGENHVCWITNLNARIVLYIVPTALVILIALFTLSFTVFNII
KQKRRTQSKLDHSTAKKTKTLDYLKMAIKLALILGLTEIFGYVQLTNIED
SQSKERTNVVFAFVYSVFRSLRGVMLWFVYVGGPLSKRYQKRVVRSLRKY
SHKNRMRTLDTQTSAETSYGGSSSASSEF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042235XLOC_042235Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067626TCONS_00067626Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000832GPCR_2_secretin-like
IPR017981GPCR_2-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0004888 transmembrane signaling receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000832GPCR, family 2, secretin-likePFAMPF000027tm_2coord: 373..625
e-value: 9.0E-22
score: 77.5
NoneNo IPR availableGENE3D1.20.1070.10coord: 353..671
e-value: 2.5E-24
score: 85.2
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 364..658
IPR017981GPCR, family 2-likePROSITEPS50261G_PROTEIN_RECEP_F2_4coord: 371..634
score: 21.713

Blast
[Close]
BLAST of TCONS_00067626-protein vs. Swiss-Prot (Human)
Match: AGRL3 (Adhesion G protein-coupled receptor L3 OS=Homo sapiens GN=ADGRL3 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.143e-19
Identity = 78/315 (24.76%), Postives = 144/315 (45.71%), Query Frame = 0 
Query:  374 ITVIGTPLSIVCYIWIITTYFIFKDLRTVPGLNNCLMCLSLLFSDIFFLSTLKAHEDKTSCTTVAVAMHWSLLSAFFWVLIISYD----LVKRFGSFTSNSRDRELKRMSYRSAMAFGIPLVIVSIALGLDTSGDVAVGYGENHVCWITNLNARIVLYIVPTALVILIALFTLSFTVFNIIKQKRRTQSKLDHSTA---KKTKTLDYLKM----AIKLALILGLTEIFGYVQLTNIEDSQSKERTNVVFAFVYSVFRSLRGVMLWFVYVGGPLSKRYQKRVVRSLRKYSHKNRMRTLDTQTSAETSYGGSSSASS 677
            IT +G  LS+VC +  I T+  F+ L++     +  +C+SL  +++ FL  +   +   +C   A  +H+  L+AF W+ +        LV+ F S        E  R  Y   + +G+P +IV+++  +D        YG + VCW+      I  +I P  L+I++ +  L   ++           K+ H TA    ++  LD +K     AI L  +LGLT  FG + +           + V+ A+++++F SL+G+ ++  +    L K+ +K   + LR +    +        S E+S G   ++ S
Sbjct:  867 ITWVGILLSLVCLLICIFTFCFFRGLQSDRNTIHKNLCISLFVAELLFLIGINRTDQPIACAVFAALLHFFFLAAFTWMFLEGVQLYIMLVEVFES--------EHSRRKYFYLVGYGMPALIVAVSAAVDYR-----SYGTDKVCWLRLDTYFIWSFIGPATLIIMLNVIFLGIALY-----------KMFHHTAILKPESGCLDNIKSWVIGAIALLCLLGLTWAFGLMYIN---------ESTVIMAYLFTIFNSLQGMFIFIFHC--VLQKKVRKEYGKCLRTHCCSGK--------STESSIGSGKTSGS 1138
The following BLAST results are available for this feature:
BLAST of TCONS_00067626-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRL33.143e-1924.76Adhesion G protein-coupled receptor L3 OS=Homo sap... [more]
back to top