TCONS_00068062-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068062-protein
Unique NameTCONS_00068062-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length750

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068062-protein ID=TCONS_00068062-protein|Name=TCONS_00068062-protein|organism=Clytia hemisphaerica|type=polypeptide|length=750bp
RQFAHPSLKQLLSLINKAGIPWSNNHELKEELKKVDAECTTCQVYQKAPP
KPIVGLPMATQFQETVAMDLKFYDSKIILHLIDMCTRLSSATTIKNKNPN
TVIEAIFKVWISVYGTPEKFLVDNGGEFANADFMDLAEQFGITIKTTAAE
SPWSNGIVERHNLTIANMLDKVLHDTDCSFDMALSWCTNAKNSLANVHGF
SSYQLAIGTNPRLLSVTTDKSPALSGEPATKLIKTNLDALHKAREAFIQS
EHSERIRRALSHNIRTSSDVKYVTGDQVYYKRKDSSEWHGPGIVLGQDGQ
QVLIKHSSYYVRVHPCRVKLVHSSFQQSEDNNRDRLQEKTTTDHVNSTTT
PINNNMQENHALFSDESDVDSENNTQPQITPTNDETNRIQSNSSNSHTRK
VAQRKPSQIPVKIKHKINIRFQNKNNEWVNAKILSKAGKVGGKHDGWFNI
ETADGAKKSVNFKSIKDIEIEDDDDSETSISTNLFQSNDNEVLNAKEKEL
TSWKSQDVYLEVENTGQSVMSLRWVITPKVINGQPSVKARLVARGFEEIQ
DFRTDSPTCSKEGLRVALLMLVSHSWSLHSLDVKTAFLQGESINRDLYVK
PPKEAGTNKLWKLRKTVYGLADASRSWYLKLRTELIKLKGKPVSLDQGIF
LWFNGSTLFGLMACFVDDVLWAGANQFVKIIDKLKETFSIGAEFNTDFKY
IGVHLQQNDDCTIKIDQNDYVKDLEVISLAQERKNLTKQEPVNEAERSQI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042490XLOC_042490Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068062TCONS_00068062Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR013103RVT_2
IPR001584Integrase_cat-core
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 55..269
e-value: 1.2E-24
score: 86.5
IPR012337Ribonuclease H-like domainSUPERFAMILY53098Ribonuclease H-likecoord: 64..211
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 515..724
e-value: 2.7E-33
score: 115.5
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 68..167
e-value: 1.3E-15
score: 57.5
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 48..219
score: 19.978
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..407

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068062-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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